CSPI07G22100 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G22100
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLate embryogenesis abundant protein
LocationChr7: 18770060 .. 18770879 (-)
RNA-Seq ExpressionCSPI07G22100
SyntenyCSPI07G22100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGTTCTTTCCATTCATAGCCAAATATAGAGAAGGAAGACTTCCTGTTTCCCTTTCAACATTCTTCTTCTTTAAGACATGGCTAAGGTTACTGGAAATAGTCTTTACTTTATAAGGTCGATCCTTCTCGAGCTGGTTTTATGTATTTAATTATCGGTTCCATTCTTTGTGTGTGTTTCTTTCATGTTCTTTTCTAATTTAGCAATGTAATGGCAGGCGAATGAGCTCTTTGGTTGCATCTGAGCAACTTAAGGCACAAACAACTGCATCAATGGTGGTTAGGAAGGTGAAGGCAGCTGTGGAGACGGGCGGTTATGATAATGAGGTAGTTGAACAGAAGAAGACGTTTTGGATGAAAGATCCTAAGAGTGGAAACTGGATTCCCGAGAATCATTTTGAAGAGATGGATGTGGTGGAATTGAGGGAGAAACTGCTGGCTAAACCTAAGAAGCTGCTCTAAAACAGCAAGTGAAAAGCTTCATTTATGTGCAAGAACAAAAGTTCCACCTTTATCCATCTTATCCATGTTACTAAATAACACCTACTGCAAAAACTATTCTAAACTACTTTTCTCTCTCTAATCTGTCACTTCTATCAACTTAAAGTCTCATCTGAATCCTCTAAAGTTCAATGGTGTTGATTTCGACCGATGAAAGAAGGGAATCCGAATCTCATCAAGTTTATCAAAGAAAGCAAATCGCCAGATCATAGTAGTTGCAACAAGTCAAGAATGATGAGTTGGCCTACACAAATTAGTAAATACGTACAATTATGGACGAACATCTCAATAGATATTTATTCTATGATTTCTTTTATTAAA

mRNA sequence

TGTGTTCTTTCCATTCATAGCCAAATATAGAGAAGGAAGACTTCCTGTTTCCCTTTCAACATTCTTCTTCTTTAAGACATGGCTAAGGTTACTGGAAATAGTCTTTACTTTATAAGGCGAATGAGCTCTTTGGTTGCATCTGAGCAACTTAAGGCACAAACAACTGCATCAATGGTGGTTAGGAAGGTGAAGGCAGCTGTGGAGACGGGCGGTTATGATAATGAGGTAGTTGAACAGAAGAAGACGTTTTGGATGAAAGATCCTAAGAGTGGAAACTGGATTCCCGAGAATCATTTTGAAGAGATGGATGTGGTGGAATTGAGGGAGAAACTGCTGGCTAAACCTAAGAAGCTGCTCTAAAACAGCAAGTGAAAAGCTTCATTTATGTGCAAGAACAAAAGTTCCACCTTTATCCATCTTATCCATGTTACTAAATAACACCTACTGCAAAAACTATTCTAAACTACTTTTCTCTCTCTAATCTGTCACTTCTATCAACTTAAAGTCTCATCTGAATCCTCTAAAGTTCAATGGTGTTGATTTCGACCGATGAAAGAAGGGAATCCGAATCTCATCAAGTTTATCAAAGAAAGCAAATCGCCAGATCATAGTAGTTGCAACAAGTCAAGAATGATGAGTTGGCCTACACAAATTAGTAAATACGTACAATTATGGACGAACATCTCAATAGATATTTATTCTATGATTTCTTTTATTAAA

Coding sequence (CDS)

ATGGCTAAGGTTACTGGAAATAGTCTTTACTTTATAAGGCGAATGAGCTCTTTGGTTGCATCTGAGCAACTTAAGGCACAAACAACTGCATCAATGGTGGTTAGGAAGGTGAAGGCAGCTGTGGAGACGGGCGGTTATGATAATGAGGTAGTTGAACAGAAGAAGACGTTTTGGATGAAAGATCCTAAGAGTGGAAACTGGATTCCCGAGAATCATTTTGAAGAGATGGATGTGGTGGAATTGAGGGAGAAACTGCTGGCTAAACCTAAGAAGCTGCTCTAA

Protein sequence

MAKVTGNSLYFIRRMSSLVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMKDPKSGNWIPENHFEEMDVVELREKLLAKPKKLL*
Homology
BLAST of CSPI07G22100 vs. ExPASy TrEMBL
Match: A0A0A0K7L4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448050 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0

Query: 1  MAKVTGNSLYFIRRMSSLVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMK 60
          MAKVTGNSLYFIRRMSS VASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMK
Sbjct: 1  MAKVTGNSLYFIRRMSSSVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMK 60

Query: 61 DPKSGNWIPENHFEEMDVVELREKLLAKPKKLL 94
          DPKSGNWIPENHFEEMDVVELREKLLAKPKKLL
Sbjct: 61 DPKSGNWIPENHFEEMDVVELREKLLAKPKKLL 93

BLAST of CSPI07G22100 vs. ExPASy TrEMBL
Match: A0A5D3BWU2 (Putative Senescence-associated protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001640 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-30
Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 0

Query: 15 MSSLVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMKDPKSGNWIPENHFE 74
          MSS +ASEQLKAQTTASMVVRKVKAAVET  YDNEVVEQKKTFWMKDPKSGNWIPENHFE
Sbjct: 1  MSSSIASEQLKAQTTASMVVRKVKAAVETSCYDNEVVEQKKTFWMKDPKSGNWIPENHFE 60

Query: 75 EMDVVELREKLLAKPK 91
          E+DVVELREKLLAKPK
Sbjct: 61 EIDVVELREKLLAKPK 76

BLAST of CSPI07G22100 vs. ExPASy TrEMBL
Match: A0A6J1B6Z6 (uncharacterized protein LOC110424687 OS=Herrania umbratica OX=108875 GN=LOC110424687 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.8e-13
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 0

Query: 1  MAKVTGNSLYFIRRMSSLVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMK 60
          MA+++  S   + R S  VA+E +K Q  AS++        E       + EQK+TFWM+
Sbjct: 1  MAQLSVKSFQLLSRRSYAVAAENMKVQAVASVMRNATDLRTEV------LAEQKETFWMR 60

Query: 61 DPKSGNWIPENHFEEMDVVELREKLLAKPKK 92
          DPK+GNWIPENHF ++DVVELREK L+K +K
Sbjct: 61 DPKTGNWIPENHFGDIDVVELREKFLSKKQK 85

BLAST of CSPI07G22100 vs. ExPASy TrEMBL
Match: A0A061G6G1 (Senescence-associated gene 21, putative OS=Theobroma cacao OX=3641 GN=TCM_016756 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.1e-12
Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 1  MAKVTGNSLYFIRRMSSLVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMK 60
          MA+++  S   + R S  VA+E +K Q  AS++        E       + EQK+TFWM+
Sbjct: 1  MAQLSVKSFQLLSRRSYAVAAENMKVQAVASVMRNATDLRAEV------LAEQKETFWMR 60

Query: 61 DPKSGNWIPENHFEEMDVVELREKLLAKPKK 92
          DPK+GNWIPENHF ++DV ELREK L+K +K
Sbjct: 61 DPKTGNWIPENHFGDIDVAELREKFLSKKQK 85

BLAST of CSPI07G22100 vs. ExPASy TrEMBL
Match: A0A061GBY1 (Senescence-associated gene 21, putative OS=Theobroma cacao OX=3641 GN=TCM_029240 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 0

Query: 1  MAKVTGNSLYFIRRMSSLVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMK 60
          MA+++  S   + R S  VA+E +K Q  AS+         E       + EQK+TFWM+
Sbjct: 1  MAQLSVKSFQLLSRRSYAVAAENMKVQAVASVTRNATDLRAEV------LAEQKETFWMR 60

Query: 61 DPKSGNWIPENHFEEMDVVELREKLLAKPKK 92
          DPK+GNWIPENHF ++DV ELREK L+K +K
Sbjct: 61 DPKTGNWIPENHFGDIDVAELREKFLSKKQK 85

BLAST of CSPI07G22100 vs. NCBI nr
Match: KAE8646489.1 (hypothetical protein Csa_015817 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 6.1e-34
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0

Query: 15 MSSLVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMKDPKSGNWIPENHFE 74
          MSS VASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMKDPKSGNWIPENHFE
Sbjct: 1  MSSSVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMKDPKSGNWIPENHFE 60

Query: 75 EMDVVELREKLLAKPKKLL 94
          EMDVVELREKLLAKPKKLL
Sbjct: 61 EMDVVELREKLLAKPKKLL 79

BLAST of CSPI07G22100 vs. NCBI nr
Match: KAA0059359.1 (putative Senescence-associated protein 21 [Cucumis melo var. makuwa] >TYK03967.1 putative Senescence-associated protein 21 [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 3.1e-30
Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 0

Query: 15 MSSLVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMKDPKSGNWIPENHFE 74
          MSS +ASEQLKAQTTASMVVRKVKAAVET  YDNEVVEQKKTFWMKDPKSGNWIPENHFE
Sbjct: 1  MSSSIASEQLKAQTTASMVVRKVKAAVETSCYDNEVVEQKKTFWMKDPKSGNWIPENHFE 60

Query: 75 EMDVVELREKLLAKPK 91
          E+DVVELREKLLAKPK
Sbjct: 61 EIDVVELREKLLAKPK 76

BLAST of CSPI07G22100 vs. NCBI nr
Match: KAG6575415.1 (hypothetical protein SDJN03_26054, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.0 bits (336), Expect = 6.5e-28
Identity = 69/93 (74.19%), Postives = 78/93 (83.87%), Query Frame = 0

Query: 1  MAKVTGNSLYFIRRMSSLVASEQLKAQTTASMVVRKVKAAVETGGYDN-EVVEQKKTFWM 60
          MAK+TGN +YFIRR+SSLVASEQLKA+ TA M V+ V A VET G D+ + VEQK  FWM
Sbjct: 1  MAKLTGNGVYFIRRLSSLVASEQLKARATAPMTVKNVIATVETSGSDDIKAVEQKNIFWM 60

Query: 61 KDPKSGNWIPENHFEEMDVVELREKLLAKPKKL 93
          KDPKSGNWIPENHF E+DVVELREKLL+K KKL
Sbjct: 61 KDPKSGNWIPENHFGEIDVVELREKLLSKTKKL 93

BLAST of CSPI07G22100 vs. NCBI nr
Match: XP_022843012.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Olea europaea var. sylvestris] >CAA3012453.1 SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Olea europaea subsp. europaea])

HSP 1 Score: 87.4 bits (215), Expect = 7.0e-14
Identity = 47/91 (51.65%), Postives = 59/91 (64.84%), Query Frame = 0

Query: 1  MAKVTGNSLYFIRRMSSLVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMK 60
          MAK + NSL  + R  S VA+E  K QTT S V+++V  +V           +K  FWMK
Sbjct: 1  MAKFSLNSLLLLSRRESTVAAEITKTQTTTSSVIKEVADSV-----------RKDVFWMK 60

Query: 61 DPKSGNWIPENHFEEMDVVELREKLLAKPKK 92
          DPK+GNWIPE HFE++DV ELREKLL+K  K
Sbjct: 61 DPKTGNWIPETHFEQIDVAELREKLLSKKTK 80

BLAST of CSPI07G22100 vs. NCBI nr
Match: CAA3012452.1 (SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Olea europaea subsp. europaea])

HSP 1 Score: 85.5 bits (210), Expect = 2.7e-13
Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 0

Query: 1  MAKVTGNSLYFIRRMSSLVASEQLKAQTTASMVVRKVKAAVETGGYDNEVVEQKKTFWMK 60
          MAK + NSL  +RR  S VA+E  K QTT S V+++V  +V           +K  FWMK
Sbjct: 1  MAKFSLNSLLLLRR-ESTVAAEITKTQTTTSSVIKEVADSV-----------RKDVFWMK 60

Query: 61 DPKSGNWIPENHFEEMDVVELREKLLAKPKK 92
          DPK+GNWIPE HFE++DV ELREKLL+K  K
Sbjct: 61 DPKTGNWIPETHFEQIDVAELREKLLSKKTK 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K7L42.3e-4298.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448050 PE=4 SV=1[more]
A0A5D3BWU21.5e-3093.42Putative Senescence-associated protein 21 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A6J1B6Z63.8e-1347.25uncharacterized protein LOC110424687 OS=Herrania umbratica OX=108875 GN=LOC11042... [more]
A0A061G6G11.1e-1246.15Senescence-associated gene 21, putative OS=Theobroma cacao OX=3641 GN=TCM_016756... [more]
A0A061GBY11.4e-1246.15Senescence-associated gene 21, putative OS=Theobroma cacao OX=3641 GN=TCM_029240... [more]
Match NameE-valueIdentityDescription
KAE8646489.16.1e-3498.73hypothetical protein Csa_015817 [Cucumis sativus][more]
KAA0059359.13.1e-3093.42putative Senescence-associated protein 21 [Cucumis melo var. makuwa] >TYK03967.1... [more]
KAG6575415.16.5e-2874.19hypothetical protein SDJN03_26054, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022843012.17.0e-1451.65protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Olea europaea var. sy... [more]
CAA3012452.12.7e-1352.75SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Olea europaea subsp. europaea... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004926Late embryogenesis abundant protein, LEA_3 subgroupPFAMPF03242LEA_3coord: 13..86
e-value: 2.1E-13
score: 50.8
IPR004926Late embryogenesis abundant protein, LEA_3 subgroupPANTHERPTHR33509LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATEDcoord: 2..90
NoneNo IPR availablePANTHERPTHR33509:SF21OS02G0564600 PROTEINcoord: 2..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G22100.1CSPI07G22100.1mRNA