CSPI07G21600 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G21600
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein UXT homolog
Location	Chr7: 18416769 .. 18419606 (-)
RNA-Seq Expression	CSPI07G21600
Synteny	CSPI07G21600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTTTAACACTTATATTAAAGTTGAAGGGTAAAAAAGCCCTAGAAGACTGTTCGGCCTCCATTTTCAACATTTGCGCATTGATTCACCGTTCTCCCGCGCACAGCTGCCGCTTGCCGTTGTTGCCGTTAGCTTAGCTTCACTCCCTCTCCCGCTCACTTCTATGGCTTCATTCATCCCTCTCGCCGATGCCTCTGCGCTCCATCTCTAATAAATTCCCTACCAACTTAGCTGAATTGGTAAATGGCCCATAAATTATTAATGGATTTTCGAAATTATTCCCCTTCTTGTATTTTGATAAATTCGTTGGAATTTTATCATCACTTTTTCAGATAACAAGAGCGTCAACAATTGTGTCTGCAGGAGGATAGAAGTTCTGCCACTTTGTTGTTCATATTTATTTTTAGAACACCCACAAGGCTGTTACGATCAGTGGTTATTTATTGATCATGGATGTAGGAACCGATAACTTTCGGCATGAGAAAGTTCAAAGGTTCGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTAGTGCATGCAATCGCTGAAAGGTATTCTTTTGTTTTAATTTATCGACTTCGTGCATTTTGAAGGATCCAAATTTAGCATTGTCTATCAAGCGAAATGTACAATCTTGTGCGCCCCTCTTAATTGATTTTACTATTTAAATTGGCGATGTGTGGCTTCACTTATATTTTTTTTCACTGTCTTTCATAGAATAGCATTAAATATCAATGTTGCCTAAGATTGCTTAATTATTAGATTTTAGTAATTGGTTAAAAAATGAAGTTTTGTGGTGGTTGGTGTCTAATGACTCTAAGCACGTGTTTAGAAGGATTAACTTTTTTGGTAGAAATCTTGGATGGTCGTGATAGGCGATTGGTGATTAAGGGAGGTATTAGTAAGAGGATGATTCAGGAGAGGAATGATGTGTGAGAAATCTTGTAAGTCGGTTGGATCCATGTAGCAGCCAAAATGTCAGTGAATTCGTGATGGATATATGTAATGTACATCGCTCTGGTCTAGGGAGGTATCTTTTTCGTTGCCTTGGGCTTTGGGAGGAATGAGAGGTCTCAAACTCTCCTTTAACTTGGATTTCATATGAATTGATTTATATGTCATTCAAAAATGTTTTTCTGTTTCTTTCCTTTGGCTTTGAGAAAGGTGGGAGCTCCAGGAATTTCTTCATTGACTAGTATGTAAAGATTTCAATAATTGGTTTCTATAAATTCAGAAGGTCGACTTTTGATCTTGTGTTTATTTTGTTGGTATATAGGATAGCGCCCATCTTGAGAATTTGAGTTGTCGATGGAAGGTGTGATTGTAAAATTCATTAAACGGTTTTTTCTATATTGTTTGTTATTTTGCAGAGATAAAGTGTTTGAGCAGCAGAAAGTGTTGTATCCTTTTTAATTCATTTGACGCCTCCTCAGATTTATGGCTTCACTTAATTCTTAATTATCCTGTCATACTTCGCTTGTGATATGTTGCCTTCTCAATTTATGATTTTAAAACTTAACATCTTTATACCATTAGCTCAGACCTTCGCCGGAACATTGAGAATTTGGAGAAAAATAGTATAACTAATCTCAGAACATTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCGATGTGTAAGTTTTACAGAACTAGATAATGAATCTGGTAGTCATTTTTCATTTCTTTTTTTCTTTTTAACATCTATAGCGTTTAAGCCACCATGAGTGCATCTCGACTAATGTCATAAAACAACTACCTCACCTCGTAACATTTGGTTGTTTGAAAACTTGAAAGATTTTAGTATTCTAGGTAGGTGTCCACTGTGGAGTTTGGATCCCTTTATCTCTAGGTCATGTTTCTTTATCGCTAGTTGCCCCTTGGATATTAGGTTAACACTCCCACTTAATTTACCTTCCTCCTGCAAATTTCGAGCTTATAATTTCTACTTGTACAGGCCAGACACACGAAGCATATTTGTAGATATTGGGCTTGGGTTTCATGTGGAGTTCACATGGTCTGAAGCTTTAAAATTCATTTCTCTCAAAGAAGAAAGGTTAATCAGGTAAATGTTTTAAGGTATTGGCCGGTATTATATAGATGACTGCTTTTACAACAGTAAGTTTTAAGGTTACAAATTTTCGTTTATTGAAGAGCCTGCATATGTTTTTGTTGTAACCATGCAGACAGATAGAAGAGTACACTCAATTAATTGCATCCATCAAAGCGCAGATCAAGTTGGTATGTATTTCATAATTAACATTTTTCTGTTCTCTGTTTCTTAATCACAAGATTCAATTTGACTATTGTACTTGATCTTTTTTTTATTCACTCATCCAACCAAGTTTATTGGTGAAAGTCGAACCTTTTAACCTTAAGAAGTACACAAACACCAATTCTTCTGGGATCCTAAAACTCTCATTTATGTCGCTATGAAGCTACATTTTTTACATTCATTTGTGGGACAGGTATACAAGCATAACTTTTTTTAAAAAAAAAATTTGCAGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAGGACTGTGGAAGAACGTGTCTTTTGAGTTTCTTTCCTGATAGTTCCTGCTTTCCTGGGGATGAAGATGGTCCTGAATCAGTATAGTTATAAAATCCTTAATTTTTTATGCTCTTTGTAAAACTAGTTCATCTTTTAGAACTTTATGGAAACATGGACGATCTTGCTTTCTGTCTCTGCATTGATTATTTATGGTTCTCAAAATCTACTTTTTCTTCTGTGTGTCAATCCCCCATCACTTTGTTGTTGGTAATTCACTTTGGATAACTTTATCAAAGAGGTCAAAG

mRNA sequence

TAATTTTAACACTTATATTAAAGTTGAAGGGTAAAAAAGCCCTAGAAGACTGTTCGGCCTCCATTTTCAACATTTGCGCATTGATTCACCGTTCTCCCGCGCACAGCTGCCGCTTGCCGTTGTTGCCGTTAGCTTAGCTTCACTCCCTCTCCCGCTCACTTCTATGGCTTCATTCATCCCTCTCGCCGATGCCTCTGCGCTCCATCTCTAATAAATTCCCTACCAACTTAGCTGAATTGGAGGATAGAAGTTCTGCCACTTTGTTGTTCATATTTATTTTTAGAACACCCACAAGGCTGTTACGATCAGTGGTTATTTATTGATCATGGATGTAGGAACCGATAACTTTCGGCATGAGAAAGTTCAAAGGTTCGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTAGTGCATGCAATCGCTGAAAGAGATAAAGTGTTTGAGCAGCAGAAAGTGTTCTCAGACCTTCGCCGGAACATTGAGAATTTGGAGAAAAATAGTATAACTAATCTCAGAACATTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCGATGTGCCAGACACACGAAGCATATTTGTAGATATTGGGCTTGGGTTTCATGTGGAGTTCACATGGTCTGAAGCTTTAAAATTCATTTCTCTCAAAGAAGAAAGGTTAATCAGACAGATAGAAGAGTACACTCAATTAATTGCATCCATCAAAGCGCAGATCAAGTTGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAGGACTGTGGAAGAACGTGTCTTTTGAGTTTCTTTCCTGATAGTTCCTGCTTTCCTGGGGATGAAGATGGTCCTGAATCAGTATAGTTATAAAATCCTTAATTTTTTATGCTCTTTGTAAAACTAGTTCATCTTTTAGAACTTTATGGAAACATGGACGATCTTGCTTTCTGTCTCTGCATTGATTATTTATGGTTCTCAAAATCTACTTTTTCTTCTGTGTGTCAATCCCCCATCACTTTGTTGTTGGTAATTCACTTTGGATAACTTTATCAAAGAGGTCAAAG

Coding sequence (CDS)

ATGGATGTAGGAACCGATAACTTTCGGCATGAGAAAGTTCAAAGGTTCGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTAGTGCATGCAATCGCTGAAAGAGATAAAGTGTTTGAGCAGCAGAAAGTGTTCTCAGACCTTCGCCGGAACATTGAGAATTTGGAGAAAAATAGTATAACTAATCTCAGAACATTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCGATGTGCCAGACACACGAAGCATATTTGTAGATATTGGGCTTGGGTTTCATGTGGAGTTCACATGGTCTGAAGCTTTAAAATTCATTTCTCTCAAAGAAGAAAGGTTAATCAGACAGATAGAAGAGTACACTCAATTAATTGCATCCATCAAAGCGCAGATCAAGTTGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAGGACTGTGGAAGAACGTGTCTTTTGA

Protein sequence

MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF*

Homology

[Close]

BLAST of CSPI07G21600 vs. ExPASy Swiss-Prot
Match: Q54ND3 (Protein UXT homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0285389 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.4e-23
Identity = 57/136 (41.91%), Postives = 90/136 (66.18%), Query Frame = 0


Query: 9   RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLRTLVN 68
           R + ++ +E F++  L  DL  +I +R+KV E  + + +L+ NIE L +N + +++T++N
Sbjct: 25  RLDSIKYYETFINETLNVDLNKSIEDREKVLENLENYLELKSNIELLIENKMDSMKTMIN 84

Query: 69  LGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEYTQLIASIK 128
           LGSE YV+  V DT  I+VDIGLG HV++T  EA+KFI+ KE  L + +E  T+ I  IK
Sbjct: 85  LGSECYVKARVQDTSYIYVDIGLGIHVKYTLEEAIKFINEKETFLNKTVENQTKKINQIK 144

Query: 129 AQIKLVCEGIRELLQL 145
            +I L+  G++EL  L
Sbjct: 145 TKIDLIQNGLKELKHL 160

[Close]

BLAST of CSPI07G21600 vs. ExPASy Swiss-Prot
Match: Q9WTZ0 (Protein UXT OS=Mus musculus OX=10090 GN=Uxt PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18
Identity = 55/131 (41.98%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLRTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYETFISDVLQRDLQKVLDHRDKVYEQLSVYLQLRNVIERLQETNHSELYMQVDLG 74

Query: 71  SEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEYTQLIASIKAQ 130
              +V   VPDT  I+V +G GF +E T +EALKFI  K   L    +  T+   +IKA 
Sbjct: 75  CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDSLTKDSMNIKAH 134

Query: 131 IKLVCEGIREL 142
           I ++ EG+REL
Sbjct: 135 IHMMLEGLREL 145

[Close]

BLAST of CSPI07G21600 vs. ExPASy Swiss-Prot
Match: Q63ZY7 (Protein UXT OS=Rattus norvegicus OX=10116 GN=Uxt PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18
Identity = 55/131 (41.98%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLRTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYEAFISDVLQRDLQKVLDHRDKVYEQLSVYLQLRNVIERLQETNHSELYMQVDLG 74

Query: 71  SEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEYTQLIASIKAQ 130
              +V   VPDT  I+V +G GF +E T +EALKFI  K   L    +  T+   +IKA 
Sbjct: 75  CNFFVDTMVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDSLTKDSMNIKAN 134

Query: 131 IKLVCEGIREL 142
           I ++ EG+REL
Sbjct: 135 IHMMLEGLREL 145

[Close]

BLAST of CSPI07G21600 vs. ExPASy Swiss-Prot
Match: A7T0W1 (Protein UXT homolog OS=Nematostella vectensis OX=45351 GN=v1g140887 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.6e-18
Identity = 51/133 (38.35%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI--TNLRTLVN 70
           EK++++EEF+D+RL  DL      +D++  +   ++ L+ +IE ++K  +   +LR+ V+
Sbjct: 13  EKIRKYEEFLDQRLAKDLEAVFKSQDEIVAKITEYTQLKSSIEQIQKTDLKGKDLRSRVD 72

Query: 71  LGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEYTQLIASIK 130
           LG   + Q  VPD   IF+ +G GF VEFT SEAL FI  K   L   +++  +  A IK
Sbjct: 73  LGCNFFCQASVPDPSRIFIAVGYGFFVEFTLSEALNFIEKKLAHLQHSVDKLGKDAAKIK 132

Query: 131 AQIKLVCEGIREL 142
           A +KLV  G++EL
Sbjct: 133 AHMKLVLGGLQEL 145

[Close]

BLAST of CSPI07G21600 vs. ExPASy Swiss-Prot
Match: Q32P97 (Protein UXT OS=Bos taurus OX=9913 GN=UXT PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-17
Identity = 54/131 (41.22%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLRTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ   +  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYEAFISDVLQRDLQKVLDHRDKVYEQLAKYLQLRNVIERLQEANHSELYMQVDLG 74

Query: 71  SEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEYTQLIASIKAQ 130
              +V   VPDT  I+V +G GF +E T +EALKFI  K   L    +  T+   +IKA 
Sbjct: 75  CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDNLTKDSMNIKAH 134

Query: 131 IKLVCEGIREL 142
           I ++ EG+REL
Sbjct: 135 IHMLLEGLREL 145

[Close]

BLAST of CSPI07G21600 vs. ExPASy TrEMBL
Match: A0A0A0K7F1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447080 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.4e-76
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDV TDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVVTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEY 120
           TN+RTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNVRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 156
           TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 155

[Close]

BLAST of CSPI07G21600 vs. ExPASy TrEMBL
Match: A0A5D3BXW7 (Protein UXT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002080 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.9e-76
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVGTD+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGTDSFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEY 120
           TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 156
           TQLIASIKAQIKLVCEGIRELLQLPAERTVE RVF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF 155

[Close]

BLAST of CSPI07G21600 vs. ExPASy TrEMBL
Match: A0A1S3CHV4 (protein UXT homolog OS=Cucumis melo OX=3656 GN=LOC103500599 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.9e-76
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVGTD+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGTDSFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEY 120
           TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 156
           TQLIASIKAQIKLVCEGIRELLQLPAERTVE RVF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF 155

[Close]

BLAST of CSPI07G21600 vs. ExPASy TrEMBL
Match: A0A6J1E2W3 (protein UXT homolog OS=Momordica charantia OX=3673 GN=LOC111025536 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.8e-74
Identity = 147/155 (94.84%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           M+VGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEY 120
           TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEAL FISL+EERL RQIEEY
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLARQIEEY 120

Query: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 156
           TQLIASIKAQIKLVCEGIRELLQLPAER+VE  VF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERSVEGHVF 155

[Close]

BLAST of CSPI07G21600 vs. ExPASy TrEMBL
Match: A0A6J1GRK9 (protein UXT homolog OS=Cucurbita moschata OX=3662 GN=LOC111456394 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.3e-71
Identity = 143/155 (92.26%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVG DNFR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEY 120
           TNL TLVNLGSEVYVQG+V DTR IFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120

Query: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 156
           T LIASIKAQIKLVCEGIRELLQLPAE+TVE  VF
Sbjct: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 155

[Close]

BLAST of CSPI07G21600 vs. NCBI nr
Match: XP_004141760.1 (protein UXT homolog [Cucumis sativus] >KGN45393.1 hypothetical protein Csa_016378 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 2.8e-76
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDV TDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVVTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEY 120
           TN+RTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNVRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 156
           TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 155

[Close]

BLAST of CSPI07G21600 vs. NCBI nr
Match: XP_008462175.1 (PREDICTED: protein UXT homolog [Cucumis melo] >KAA0059317.1 protein UXT-like protein [Cucumis melo var. makuwa] >TYK04010.1 protein UXT-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-75
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVGTD+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGTDSFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEY 120
           TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTRQIEEY 120

Query: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 156
           TQLIASIKAQIKLVCEGIRELLQLPAERTVE RVF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF 155

[Close]

BLAST of CSPI07G21600 vs. NCBI nr
Match: XP_022159095.1 (protein UXT homolog [Momordica charantia] >XP_022159096.1 protein UXT homolog [Momordica charantia])

HSP 1 Score: 287.7 bits (735), Expect = 5.9e-74
Identity = 147/155 (94.84%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           M+VGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEY 120
           TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEAL FISL+EERL RQIEEY
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLARQIEEY 120

Query: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 156
           TQLIASIKAQIKLVCEGIRELLQLPAER+VE  VF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERSVEGHVF 155

[Close]

BLAST of CSPI07G21600 vs. NCBI nr
Match: XP_038897562.1 (protein UXT homolog [Benincasa hispida])

HSP 1 Score: 282.7 bits (722), Expect = 1.9e-72
Identity = 144/155 (92.90%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MD G DNFR+EKV+RFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDAGIDNFRNEKVKRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEY 120
           TNLR LVNLGSEVY QGDVPDTRSIFVD+GLGFHVEFTWSEALKF+SLKEERL RQIEEY
Sbjct: 61  TNLRMLVNLGSEVYGQGDVPDTRSIFVDVGLGFHVEFTWSEALKFLSLKEERLARQIEEY 120

Query: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 156
           TQLIASIKAQIKLVCEGIRELLQLPAERT+E RVF
Sbjct: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTIEGRVF 155

[Close]

BLAST of CSPI07G21600 vs. NCBI nr
Match: XP_022954004.1 (protein UXT homolog [Cucurbita moschata] >KAG7014064.1 Protein UXT-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.1 bits (710), Expect = 4.7e-71
Identity = 143/155 (92.26%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MDVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60
           MDVG DNFR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI
Sbjct: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEY 120
           TNL TLVNLGSEVYVQG+V DTR IFVD+GLGFHVEFTWSEALKFISLKEERL RQIEEY
Sbjct: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLARQIEEY 120

Query: 121 TQLIASIKAQIKLVCEGIRELLQLPAERTVEERVF 156
           T LIASIKAQIKLVCEGIRELLQLPAE+TVE  VF
Sbjct: 121 THLIASIKAQIKLVCEGIRELLQLPAEKTVEAHVF 155

[Close]

BLAST of CSPI07G21600 vs. TAIR 10
Match: AT1G26660.1 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 159.5 bits (402), Expect = 2.3e-39
Identity = 79/139 (56.83%), Postives = 105/139 (75.54%), Query Frame = 0


Query: 9   RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSITNLRTLVN 68
           R + +Q  EE +D+ LK  LVHA A RDK+FE+QK  SDLR+N+E LEKN + +L+T VN
Sbjct: 5   RQKDLQLLEEIIDKGLKQKLVHATASRDKIFEEQKTLSDLRKNLETLEKNGVNSLKTRVN 64

Query: 69  LGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEYTQLIASIK 128
           LGSEVY+Q +VPDTR IF+D+GLGF+VEFT  EAL +I+ +EER  +Q+EEYT +I  IK
Sbjct: 65  LGSEVYMQAEVPDTRHIFMDVGLGFYVEFTRQEALDYIAQREERTQKQLEEYTGVITQIK 124

Query: 129 AQIKLVCEGIRELLQLPAE 148
            +IKL    I+++L LP E
Sbjct: 125 GRIKLAHYQIQQILNLPEE 143

[Close]

BLAST of CSPI07G21600 vs. TAIR 10
Match: AT1G26660.2 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-28
Identity = 69/141 (48.94%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 8   FRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVF-SDLRRNIENLEKNSITNLRTL 67
           FR   V  F  F   R   +  H I     ++ +   F SDLR+N+E LEKN + +L+T 
Sbjct: 32  FRFIVVSAFVGFAGTRSLKNKKHCIL----LYREDSSFSSDLRKNLETLEKNGVNSLKTR 91

Query: 68  VNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLIRQIEEYTQLIAS 127
           VNLGSEVY+Q +VPDTR IF+D+GLGF+VEFT  EAL +I+ +EER  +Q+EEYT +I  
Sbjct: 92  VNLGSEVYMQAEVPDTRHIFMDVGLGFYVEFTRQEALDYIAQREERTQKQLEEYTGVITQ 151

Query: 128 IKAQIKLVCEGIRELLQLPAE 148
           IK +IKL    I+++L LP E
Sbjct: 152 IKGRIKLAHYQIQQILNLPEE 168

The following BLAST results are available for this feature:

BLAST of CSPI07G21600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54ND3	6.4e-23	41.91	Protein UXT homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0285389 PE=3 SV...	[more]
Q9WTZ0	2.1e-18	41.98	Protein UXT OS=Mus musculus OX=10090 GN=Uxt PE=1 SV=2	[more]
Q63ZY7	2.1e-18	41.98	Protein UXT OS=Rattus norvegicus OX=10116 GN=Uxt PE=2 SV=1	[more]
A7T0W1	3.6e-18	38.35	Protein UXT homolog OS=Nematostella vectensis OX=45351 GN=v1g140887 PE=3 SV=1	[more]
Q32P97	2.4e-17	41.22	Protein UXT OS=Bos taurus OX=9913 GN=UXT PE=2 SV=1	[more]

BLAST of CSPI07G21600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7F1	1.4e-76	98.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447080 PE=4 SV=1	[more]
A0A5D3BXW7	8.9e-76	97.42	Protein UXT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CHV4	8.9e-76	97.42	protein UXT homolog OS=Cucumis melo OX=3656 GN=LOC103500599 PE=4 SV=1	[more]
A0A6J1E2W3	2.8e-74	94.84	protein UXT homolog OS=Momordica charantia OX=3673 GN=LOC111025536 PE=4 SV=1	[more]
A0A6J1GRK9	2.3e-71	92.26	protein UXT homolog OS=Cucurbita moschata OX=3662 GN=LOC111456394 PE=4 SV=1	[more]

BLAST of CSPI07G21600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141760.1	2.8e-76	98.06	protein UXT homolog [Cucumis sativus] >KGN45393.1 hypothetical protein Csa_01637...	[more]
XP_008462175.1	1.8e-75	97.42	PREDICTED: protein UXT homolog [Cucumis melo] >KAA0059317.1 protein UXT-like pro...	[more]
XP_022159095.1	5.9e-74	94.84	protein UXT homolog [Momordica charantia] >XP_022159096.1 protein UXT homolog [M...	[more]
XP_038897562.1	1.9e-72	92.90	protein UXT homolog [Benincasa hispida]	[more]
XP_022954004.1	4.7e-71	92.26	protein UXT homolog [Cucurbita moschata] >KAG7014064.1 Protein UXT-like protein ...	[more]

BLAST of CSPI07G21600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26660.1	2.3e-39	56.83	Prefoldin chaperone subunit family protein	[more]
AT1G26660.2	1.4e-28	48.94	Prefoldin chaperone subunit family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..58
None	No IPR available	COILS	Coil	Coil	coord: 110..130
None	No IPR available	PANTHER	PTHR13345:SF4	PROTEIN UXT	coord: 8..148
None	No IPR available	PANTHER	PTHR13345	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	coord: 8..148
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 41..144
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 2..149 e-value: 6.2E-29 score: 102.6
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 30..134 e-value: 3.0E-18 score: 65.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G21600.1	CSPI07G21600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0000785	chromatin
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity