CSPI07G21130 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G21130
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA-repair protein XRCC1 isoform X2
Location	Chr7: 18110075 .. 18115087 (-)
RNA-Seq Expression	CSPI07G21130
Synteny	CSPI07G21130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTTACCAAAGATACAAATTAATGAAATTGAAGGGATTGAAGAGTAAATCTAACAGTTTCTATAACTCGGAACGGTGGAAATATGGGAAGGTTGCAATCGCGGGCTATGTGCTGACTTCTTGAATCGACTCTGAACCTTTCGAATCAACTCACTGGAAGTAAAATTCAGGTATCGTTTCGTTTCTAATTTCAATCATCATCTTCCTACAATCTTTGCCGGTTTCTTGCTAACCTACCCGATCACGATACGCTGTAATGCCAGTGGTCAAATTTCACTTCAGCTTGGCGACTGCATATCAAACTTAATGCACTGCTTAATATGTTTTGACCTCGTTGAGCTTAATACCTTCCATTTTCCTGTCGGTTCGCTACCAAATGTTGTGTTAATTTTCTATTATTATTCGTAATTATCTTGATATGAAGTGGCAACATTAGTTTTTCAAGTTCGATCGGGTATTGAGAATTGATGAGATGAAATTGACATGAACTCGTTTAGGTTTGGTTAGGTTTTGTAACTAGTGCATTTTGATTCTATGTTTGTGTCACCTGGCAATAATTTGAAGTTGTTTCAGTATTGTAAAACAGCGTCCATAATCTTTGTAGGCTCTTACTCGCACCTCTTTAGTGCTTTGAGAACGGGTGTCTTTAGAGTTTTCATGCAAGTCTTCATTGCATTTGAGATGAGCTGACAAATTTCAGCCTGGTAGTAGAAAGTGAATCGCTTTAGCAGGAGCGATATGTCAAATTCAAAGGCCAATGAGGGTGGCGGCAGTGCTAAGCGCAGTCTTCCTTCATGGATGAGTGGGAAGGACGATGGAAGTACGTCTCGAGGCAAGAAACCAAACAGTTCTGCTTCTGTTGGAAATGATTTGATGGTCGAAGCTGAAGAGCCTAAGCAAGAGAAGGGAAATGGTGAAGGTCCAGTGAGCAGTTCATTACACCATGATTTCTCCAGACTTCTGGTTTACATATTGTCTCTTTTCACCCATTGTCTTCCTTTTACCTGCTATTTTTACATATTTTGATAGTTGACAGTCGCACTAAACTAAAAGGCCAACGTTAAATGCAGGAAGGAGTAGTTTTCGTGTTGTCAGGTTTTGTTAATCCTGAGCGTAGCATTTTGCGATCTCAAGCTTTAGAAATGGGAGCTCAATATAAACCTGATTGGAACTCAGATTGCACTTTGTTGATCTGTGCTTTCCCAAATACCCCAAAATTTCGGCAAGTGGAGTCAGATTGTGGAACCATAGTATCAAAGGTTTTTTCTTTGTACAAAAACTTGAGCATTAACCAGATATTGTTACAAAGAAAAAATGTGTTGGCTTTGATATGTAGGAATCGGAGAGTTGGTTGCTAAAATTTTTTCTGATGCTAGATTTGATTAAAGGGAAAACTTGATAGCTGTATGTTTGGTGTCAATTATTCAACCATATTGATGATATGAAATAAATTTTCTGCTTATTTTAGTAGGTTCTGAACATTGTGGTTTATTTGAAATATTCTCAGTCTTGCTTTTGTCATGGTTTCTTTTTCTTGGATCATGAAAATTAACAAGTTTTATTCTTCATTAAGCATGTTATATCATATTGCTCTCTTTCAAGCATATCAATATCAGCACATTTTCTCCTAGATGTATCTAGAAATCAAGTCTAAAATCTGACTGTATCATATCTGATTGTCACTGATACGGGGATTCTAAATCGTTGATTTAGGTTCTAAGTGCTCTCATTCTGTCTTCTTTCTTAGGAGTGGATTTCAGAATGTTATGCACAGAAGAGGCTTGTTGACATTGAAAGCTACCTCCTCTATGCTGGAAAACCTTGGAGAAGATGCGATCTTTCACGTGAAGCCACCCAAGGTGATCTAAAAATAATTATGTGTCCATGGCTGTAGTTCCACTGAATGTTAATGTTAGTCACAAGACTCAAAACCACCATGGCCACAGCTGACACAGTAGTCATAGAACTATAGTCAAACTATGGTGCATTGTTTTCGATTGACCAACTTTAGAAGAAACAAACTTCTTAGTGATCATATGAAAAATACAAAGAGATATACAAATTATAGGAGGTTACAAAAGCCACACCAATTGGCTACAATGAGAAAGGTGTTATTATTACTTGAGAGGAAGAGAGAGTAAACCAAAACGACATAGAATTTAATCTTTTTTCCAAATAAAAATATTCTCCCAACCTTACTCATTCCTTCAAAATGTTCTTTAATTCCTTTTCTACTGAACATTCTGAAGTGTTTTTACCACACAAAGCCATGAAAACTTAGATTTCTGTAGAAGCCACAAAGGAGTTAGCGAAGGTTCATGACTAGAGAATCTACCATACACCAAGGTTAAGTTCCTTAAAAACCCCATTCTAGCATTTGTAAATGATTCTATAACTAAGTAAAATATGGTTCTTATTTTCACTGCCTTACATCAAAACCCTAAAAAACAATTAGTAGTGAAGTGTTTTTCCCCCAGTATATTATTTACTGTGTTGTGCTCTTTTCTGAACCAGAAACATTTCGTTCATAATATGATAAGGAAATGTTCAGGAAACAAACTCCCGATGGAGTGAGGAGGAAAAGGAAAGAAAAATGAAACAAACAACCTCAACTAGAGCATTGCAACCAAAAAAGACAAAGAAAATCAGAAGCAATGAGCCATCAAGTGAAATGATCCAGGTTCGGCAGCCCTCAAGAACAAGGCTCCAAGCCTCCAACAAAGAACCCCAAAACAAAACTCTATGAGAAAGTGATTTTAAAAAAATAACAAAAAACAAAAAGATAGGAGAGAAGAAAGAAAGAAAGAAAGAAACAGAAGCCAACTATTGAAGTCAGCCAAATAAAGGAGAAAAAGTAGGCCCATAAAAAAACACGGGAGCTTACTATACCCAGAGAAAGACACCTTTAATCATCTAATGACCCAAAAAGAGAATCTGATGAGTAAATTTCCTCTCCCTGAGTGAGAACTTGATGCCTTGGCAAAATATCCTTGGCAGTTTGAATCTTTGGCTTCTACAGTTGCAAACCAAAGAAAATTCCTCCCCCACCCCCCCACACCCACTTTTTTGGTTGGTGTCATGGCGTTGGACACTTGAAGTCTTGTAACTATCATTTCGTTGTTTTCCTGATTTTTTCAATGTTTTGATACCTTTCGTTCCTTCACCTTGTACCTGATATGCCGAAGAATCATTTTTTAATTTCCCATCATCCATTTTCATCCTGGGGTCTATGGTTGCAGATATTCCATCACCATCCAAGAAACCTCAGAGAGTGGTTGAAAAAACTTCACATTTAAAACCACATGAGCCGGAGATAGCTCAGGTAAATAGTCTAATTCTTTTGAAATTATATTCCATTATATCGTCTTTGTCTTTCCATTCTGATTAGTATTTGTATGCTTTATATGGGACGTAACAAAACAAAATTGACCTTTTGTGGGATGCTGGTTATTGTTCGGCTACATCTTTTATATTCATATACATACAAATGCTGATATATGGCTATTTATACCATTGATTGTGCGAGATATCCAGAGTAGACGGAGTAATTTTTCAAGAGACTGCTTTTCTCCTTCGAAATTAAAGAAATGGGCTATTGATGATTACCATAAGACACTTTCTTGGCTAGAGAGTCAAGAAGAGAAGGTAACACACATGCTTTTCTGTTTTATGCAATGTATAGATTTTACTTCAAGCACAAAGTACCCCAATTGAGTTCAATGGCAACCTGGAATCTTCTCTCAATCCCTTGGTTGGTTCTTAGGAATGTATGGGCTCTTTGGTTTTTCACACTTCAAATTTGGATAGATTGTGAGACTTCGTTGATTTTAATTCTTATTTTTAACCTTTGTAGCCAGATCCAAGTGAGATAAAGAAAATAGCAGCAGAAGGAATTTTAACTTGTTTACAAGATGCCATAGATTCTCTTCATCAAAATCAGGTAGACAGTTTTTTCCTATTTATGTATTTATGATCTATCTATTTCTCCTTTGCACTCACTGTGCTACTAAATGTTTGCCTAACTATAAGATAACGTGTAAAAAAAACATCAATGTATGTTATTGAGATTTTCTAAATGGTCTCGGTGTCTCGCTAGTGTGAGAAAACAGATGATATTACCGACCAATCAGCTATACTGTGAATGATCAGGCATTTCAACCCCTGACAGTTGCAACTTAGCATGAGAACCATTTTATCACAAATTTCTATTGGCTGGGAATAATTTTGAGTTCAACTGGTGCTGGATTTTGTTCCTTCAAGGTTCATGCGAGCGTCCTGTCAAATATTCCACTGTCACTTCTCTCATTATCTCGCCTTTCTCGCAATATGCTTGCATGCTTCATTGTTCATTTATTTTATTTAACGTGAAATGGAAAAGGTATCTGCTCTCAGCCTTATAGATTGGCACTTTAAACACAATTAATTCTTGTGCAGGACATCAATCAGATGACTGAAGAATGGAAGTTCGTTCCCCAGGTGGTGGAAGAGCTGGCAAAGCTTAGCAATAAGAAAGAGTCGATATCAAAGGAGGAACTTTGCAGGCAGGCCACGGATTCTAAAAGCATTTATGAAGTAGAACTTAATTCTCTTCTTGAGAGTTCCCCAGAAAGAAAGAAGAAGCGAATTGTCAAGAAAGAGTCGAAGAATGGTCATGAAACAAAGGAATATGATAGTGATGACACGATTGAGATGACTGAGGAGGAGATAGACGTGGCATTCCATAAAGTAGTTTGTAAGAATTCTTAGTTTAGGTCCTTTGAGATTTACAAAGAGAAACGCTTTTGCTGGTATGCGTTGTTGCCATAGTATGCTTGTGTTAATCTAAAGAAGTGAGAATGGGTCCATTGATTCTATATTCTCGTGCTTACTTGACATGTTTGAGAGTGGTTCTAAAATATTATAATCACTTTTGATTTTGGGATTTTAAAATTGCTCTCAAACATTTGAACATTCAATAGTTAACCTTTTGTAGCTGTATAATGCTATCTTTTCGTGGTGTTTGGACAGCGGG

mRNA sequence

AAAACTTACCAAAGATACAAATTAATGAAATTGAAGGGATTGAAGAGTAAATCTAACAGTTTCTATAACTCGGAACGGTGGAAATATGGGAAGGTTGCAATCGCGGGCTATGTGCTGACTTCTTGAATCGACTCTGAACCTTTCGAATCAACTCACTGGAAGTAAAATTCAGGCTCTTACTCGCACCTCTTTAGTGCTTTGAGAACGGGTGTCTTTAGAGTTTTCATGCAAGTCTTCATTGCATTTGAGATGAGCTGACAAATTTCAGCCTGGTAGTAGAAAGTGAATCGCTTTAGCAGGAGCGATATGTCAAATTCAAAGGCCAATGAGGGTGGCGGCAGTGCTAAGCGCAGTCTTCCTTCATGGATGAGTGGGAAGGACGATGGAAGTACGTCTCGAGGCAAGAAACCAAACAGTTCTGCTTCTGTTGGAAATGATTTGATGGTCGAAGCTGAAGAGCCTAAGCAAGAGAAGGGAAATGGTGAAGGTCCAGTGAGCAGTTCATTACACCATGATTTCTCCAGACTTCTGGAAGGAGTAGTTTTCGTGTTGTCAGGTTTTGTTAATCCTGAGCGTAGCATTTTGCGATCTCAAGCTTTAGAAATGGGAGCTCAATATAAACCTGATTGGAACTCAGATTGCACTTTGTTGATCTGTGCTTTCCCAAATACCCCAAAATTTCGGCAAGTGGAGTCAGATTGTGGAACCATAGTATCAAAGGAGTGGATTTCAGAATGTTATGCACAGAAGAGGCTTGTTGACATTGAAAGCTACCTCCTCTATGCTGGAAAACCTTGGAGAAGATGCGATCTTTCACGTGAAGCCACCCAAGATATTCCATCACCATCCAAGAAACCTCAGAGAGTGGTTGAAAAAACTTCACATTTAAAACCACATGAGCCGGAGATAGCTCAGAGTAGACGGAGTAATTTTTCAAGAGACTGCTTTTCTCCTTCGAAATTAAAGAAATGGGCTATTGATGATTACCATAAGACACTTTCTTGGCTAGAGAGTCAAGAAGAGAAGCCAGATCCAAGTGAGATAAAGAAAATAGCAGCAGAAGGAATTTTAACTTGTTTACAAGATGCCATAGATTCTCTTCATCAAAATCAGGACATCAATCAGATGACTGAAGAATGGAAGTTCGTTCCCCAGGTGGTGGAAGAGCTGGCAAAGCTTAGCAATAAGAAAGAGTCGATATCAAAGGAGGAACTTTGCAGGCAGGCCACGGATTCTAAAAGCATTTATGAAGTAGAACTTAATTCTCTTCTTGAGAGTTCCCCAGAAAGAAAGAAGAAGCGAATTGTCAAGAAAGAGTCGAAGAATGGTCATGAAACAAAGGAATATGATAGTGATGACACGATTGAGATGACTGAGGAGGAGATAGACGTGGCATTCCATAAAGTAGTTTGTAAGAATTCTTAGTTTAGGTCCTTTGAGATTTACAAAGAGAAACGCTTTTGCTGGTATGCGTTGTTGCCATAGTATGCTTGTGTTAATCTAAAGAAGTGAGAATGGGTCCATTGATTCTATATTCTCGTGCTTACTTGACATGTTTGAGAGTGGTTCTAAAATATTATAATCACTTTTGATTTTGGGATTTTAAAATTGCTCTCAAACATTTGAACATTCAATAGTTAACCTTTTGTAGCTGTATAATGCTATCTTTTCGTGGTGTTTGGACAGCGGG

Coding sequence (CDS)

ATGTCAAATTCAAAGGCCAATGAGGGTGGCGGCAGTGCTAAGCGCAGTCTTCCTTCATGGATGAGTGGGAAGGACGATGGAAGTACGTCTCGAGGCAAGAAACCAAACAGTTCTGCTTCTGTTGGAAATGATTTGATGGTCGAAGCTGAAGAGCCTAAGCAAGAGAAGGGAAATGGTGAAGGTCCAGTGAGCAGTTCATTACACCATGATTTCTCCAGACTTCTGGAAGGAGTAGTTTTCGTGTTGTCAGGTTTTGTTAATCCTGAGCGTAGCATTTTGCGATCTCAAGCTTTAGAAATGGGAGCTCAATATAAACCTGATTGGAACTCAGATTGCACTTTGTTGATCTGTGCTTTCCCAAATACCCCAAAATTTCGGCAAGTGGAGTCAGATTGTGGAACCATAGTATCAAAGGAGTGGATTTCAGAATGTTATGCACAGAAGAGGCTTGTTGACATTGAAAGCTACCTCCTCTATGCTGGAAAACCTTGGAGAAGATGCGATCTTTCACGTGAAGCCACCCAAGATATTCCATCACCATCCAAGAAACCTCAGAGAGTGGTTGAAAAAACTTCACATTTAAAACCACATGAGCCGGAGATAGCTCAGAGTAGACGGAGTAATTTTTCAAGAGACTGCTTTTCTCCTTCGAAATTAAAGAAATGGGCTATTGATGATTACCATAAGACACTTTCTTGGCTAGAGAGTCAAGAAGAGAAGCCAGATCCAAGTGAGATAAAGAAAATAGCAGCAGAAGGAATTTTAACTTGTTTACAAGATGCCATAGATTCTCTTCATCAAAATCAGGACATCAATCAGATGACTGAAGAATGGAAGTTCGTTCCCCAGGTGGTGGAAGAGCTGGCAAAGCTTAGCAATAAGAAAGAGTCGATATCAAAGGAGGAACTTTGCAGGCAGGCCACGGATTCTAAAAGCATTTATGAAGTAGAACTTAATTCTCTTCTTGAGAGTTCCCCAGAAAGAAAGAAGAAGCGAATTGTCAAGAAAGAGTCGAAGAATGGTCATGAAACAAAGGAATATGATAGTGATGACACGATTGAGATGACTGAGGAGGAGATAGACGTGGCATTCCATAAAGTAGTTTGTAAGAATTCTTAG

Protein sequence

MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGEGPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPNTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSPSKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEKPDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISKEELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEIDVAFHKVVCKNS*

Homology

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BLAST of CSPI07G21130 vs. ExPASy Swiss-Prot
Match: Q24JK4 (DNA-repair protein XRCC1 OS=Arabidopsis thaliana OX=3702 GN=XRCC1 PE=1 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 6.5e-90
Identity = 195/373 (52.28%), Postives = 247/373 (66.22%), Query Frame = 0


Query: 12  SAKRSLPSWMSGKD---DGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGEGPVSSSLH 71
           S KR+LPSWMS +D     S S  KKP              E P +E  +   P + S H
Sbjct: 2   SQKRNLPSWMSSRDPEITPSKSHCKKPKD------------EGPTEEHNSRNAPSNKSEH 61

Query: 72  -------HDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPN 131
                   +FS+L+EGVVFVLSGFVNPERS LRSQAL MGA Y+PDWN+  TLLICAFPN
Sbjct: 62  AEPSSNTTEFSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPN 121

Query: 132 TPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP- 191
           TPKFRQVE++ GTI+SKEWI+ECYAQK+LVDIE YL++AGKPWR+    ++A ++     
Sbjct: 122 TPKFRQVETNGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHL 181

Query: 192 SKKPQRVVEKTSHLKPHEPEIAQSRRS--NFSRDCFSPSKLKKWAIDDYHKTLSWLESQE 251
           SKKP++ VEK +  +   P  +   RS  N  ++ F  +++KKWA DD  +T+SWLESQE
Sbjct: 182 SKKPEKQVEKKTETR-GTPSTSSKNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQE 241

Query: 252 EKPDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKL--SNKKE 311
           EKP+P EIK+IAAEG+LTCLQDAIDSL Q QDI  +TE W FVP+VV+EL K+  S+KKE
Sbjct: 242 EKPEPGEIKRIAAEGVLTCLQDAIDSLEQKQDIGSVTELWSFVPRVVKELGKMESSSKKE 301

Query: 312 --SISKEELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIE 368
             + SKEE+C+QA   K IYE EL     + P         ++         YDSD T+E
Sbjct: 302 NSTASKEEVCKQAKSWKKIYEAEL-----AKP--------GEDESTSRVACGYDSDMTVE 348

[Close]

BLAST of CSPI07G21130 vs. ExPASy Swiss-Prot
Match: Q9ESZ0 (DNA repair protein XRCC1 OS=Rattus norvegicus OX=10116 GN=Xrcc1 PE=1 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-22
Identity = 52/108 (48.15%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 52  PKQEKGNGEGPVSSSL-HHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNS 111
           P + +G G  P  +     +  ++L+GVV VLSGF NP RS LR +ALE+GA+Y+PDW  
Sbjct: 296 PGKPRGEGTEPRGARAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTP 355

Query: 112 DCTLLICAFPNTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLL 159
           D T LICAF NTPK+ QV    G IV KEW+ +CY  +R +    YL+
Sbjct: 356 DSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCYRMRRRLPSRRYLM 403

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BLAST of CSPI07G21130 vs. ExPASy Swiss-Prot
Match: P18887 (DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-21
Identity = 61/157 (38.85%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 48  EAEEPKQEKGNGEGPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPD 107
           E  EP++ +   E         +  ++L+GVV VLSGF NP RS LR +ALE+GA+Y+PD
Sbjct: 302 EGTEPRRPRAGPE---------ELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPD 361

Query: 108 WNSDCTLLICAFPNTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYA-GKPWRR 167
           W  D T LICAF NTPK+ QV    G IV KEW+ +C+  +R +    YL+   G     
Sbjct: 362 WTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPGSSSEE 421

Query: 168 CDLSRE--ATQDIPS-PSKKPQRVVEKTSHLKPHEPE 201
            + S    +  + P  P K+PQ   + T    P  P+
Sbjct: 422 DEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQ 449

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BLAST of CSPI07G21130 vs. ExPASy Swiss-Prot
Match: Q60596 (DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 2.4e-20
Identity = 71/187 (37.97%), Postives = 90/187 (48.13%), Query Frame = 0


Query: 24  KDDGSTSRGKKPNSSASVGNDLMVEAEEPKQE----KGNGEGPVSSSLH---HDFSRLLE 83
           K     S  K+P  S          A  P Q     K  GEG           +  ++L+
Sbjct: 262 KPSAGPSTLKRPKLSVPSRTPAAAPASTPAQRAVPGKPRGEGTEPRGARTGPQELGKILQ 321

Query: 84  GVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPNTPKFRQVESDCGTIV 143
           GVV VLSGF NP RS LR +ALE+GA+Y+PDW  D T LICAF NTPK+ QV    G IV
Sbjct: 322 GVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIV 381

Query: 144 SKEWISECYAQKRLVDIESYLL--YAGKPWRRCDLSREATQD-IPS-PSKKPQRVVEKTS 200
            KEW+ +C+  +R +    YL+           D   E+ +D  P  P K+PQ    KT 
Sbjct: 382 RKEWVLDCHHMRRRLPSRRYLMAGLGSSSEDEGDSHSESGEDEAPKLPQKRPQPKA-KTQ 441

[Close]

BLAST of CSPI07G21130 vs. ExPASy Swiss-Prot
Match: O54935 (DNA repair protein XRCC1 OS=Cricetulus griseus OX=10029 GN=XRCC1 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-19
Identity = 72/201 (35.82%), Postives = 99/201 (49.25%), Query Frame = 0


Query: 4   SKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGEGPV 63
           SK + G  + KR  P         + +    P   A+ G     +  E  + +G   GP 
Sbjct: 263 SKPSAGPPTLKR--PKLTVPSRSPAAAAASTPAQKAAPG-----KPREGTEPRGARAGP- 322

Query: 64  SSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPNTP 123
                 +  ++L+GVV VLSGF NP RS LR +ALE+GA+Y+PDW  D T LICAF NTP
Sbjct: 323 -----QELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANTP 382

Query: 124 KFRQVESDCGTIVSKEWISECYAQKRLVDIESYL---LYAGKPWRRCDLSREATQD-IPS 183
           K+ QV    G IV KEW+ +CY  +R +    YL   L +       D   E+ +D  P 
Sbjct: 383 KYSQVLGLGGRIVRKEWVLDCYRLRRRLPSRRYLMAGLGSSSEDEEDDSPGESGEDEAPK 442

Query: 184 PSKKPQRVVEKTSHLKPHEPE 201
            S+K  +   KT    P  P+
Sbjct: 443 LSRKRPQAKAKTQAAGPSSPQ 450

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BLAST of CSPI07G21130 vs. ExPASy TrEMBL
Match: A0A0A0KAC1 (BRCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G440580 PE=4 SV=1)

HSP 1 Score: 736.9 bits (1901), Expect = 4.2e-209
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0


Query: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60
           MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE
Sbjct: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60

Query: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120
           GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP
Sbjct: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180
           NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180

Query: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300

Query: 301 EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI 360
           EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI
Sbjct: 301 EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI 360

Query: 361 DVAFHKVVCKNS 373
           DVAFHKVVCKNS
Sbjct: 361 DVAFHKVVCKNS 372

[Close]

BLAST of CSPI07G21130 vs. ExPASy TrEMBL
Match: A0A1S4E338 (DNA-repair protein XRCC1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499750 PE=4 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 3.9e-194
Identity = 348/372 (93.55%), Postives = 355/372 (95.43%), Query Frame = 0


Query: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60
           MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSS SVGNDLM+EAEEPKQ+KGNGE
Sbjct: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSGSVGNDLMIEAEEPKQQKGNGE 60

Query: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120
           GPVSSSLH DFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP
Sbjct: 61  GPVSSSLHRDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180
           NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRR DLS EATQDIPS 
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRSDLSHEATQDIPSE 180

Query: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQ+VVEK S  KPHE EIAQSR+SN SRDCFSPSKLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 SKKPQKVVEKVSRSKPHESEIAQSRQSNLSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQM EEWKFVPQVVEELAKLSNKKESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMIEEWKFVPQVVEELAKLSNKKESISK 300

Query: 301 EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI 360
           +ELCR ATDSKSIYEVELNSLL+ SPERKKK  +KKESK G ETKEYDSDDTIEMTEEEI
Sbjct: 301 DELCRHATDSKSIYEVELNSLLDGSPERKKKGNIKKESKKGRETKEYDSDDTIEMTEEEI 360

Query: 361 DVAFHKVVCKNS 373
           DVAFHKVVCKNS
Sbjct: 361 DVAFHKVVCKNS 372

[Close]

BLAST of CSPI07G21130 vs. ExPASy TrEMBL
Match: A0A5A7USA9 (DNA-repair protein XRCC1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002530 PE=4 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 3.3e-193
Identity = 347/372 (93.28%), Postives = 353/372 (94.89%), Query Frame = 0


Query: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60
           MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSS SVGNDLM+EAEEPKQ+KGNGE
Sbjct: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSGSVGNDLMIEAEEPKQQKGNGE 60

Query: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120
            PVSSSLH DFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP
Sbjct: 61  SPVSSSLHRDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180
           NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRR DLS EATQDIPS 
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRSDLSHEATQDIPSE 180

Query: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240
            KKPQ+VVEK S  KPHE EIAQSRRSN SRDCFSPSKLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 FKKPQKVVEKVSRSKPHESEIAQSRRSNLSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQM EEWKFVPQVVEELAKLSNKKESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMIEEWKFVPQVVEELAKLSNKKESISK 300

Query: 301 EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI 360
           +ELCR ATDSKSIYEVELNSLL+ SPERKKK  +KKESK G ETKEYDSDDTIEMTEEEI
Sbjct: 301 DELCRHATDSKSIYEVELNSLLDGSPERKKKGNIKKESKKGRETKEYDSDDTIEMTEEEI 360

Query: 361 DVAFHKVVCKNS 373
           DVAFHKVVCKNS
Sbjct: 361 DVAFHKVVCKNS 372

[Close]

BLAST of CSPI07G21130 vs. ExPASy TrEMBL
Match: A0A1S4E335 (DNA-repair protein XRCC1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499750 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 1.9e-188
Identity = 337/361 (93.35%), Postives = 344/361 (95.29%), Query Frame = 0


Query: 12  SAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGEGPVSSSLHHDF 71
           SAKRSLPSWMSGKDDGSTSRGKKPNSS SVGNDLM+EAEEPKQ+KGNGEGPVSSSLH DF
Sbjct: 30  SAKRSLPSWMSGKDDGSTSRGKKPNSSGSVGNDLMIEAEEPKQQKGNGEGPVSSSLHRDF 89

Query: 72  SRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPNTPKFRQVESD 131
           SRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPNTPKFRQVESD
Sbjct: 90  SRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPNTPKFRQVESD 149

Query: 132 CGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSPSKKPQRVVEKT 191
           CGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRR DLS EATQDIPS SKKPQ+VVEK 
Sbjct: 150 CGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRSDLSHEATQDIPSESKKPQKVVEKV 209

Query: 192 SHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEKPDPSEIKKIAA 251
           S  KPHE EIAQSR+SN SRDCFSPSKLKKWAIDDYHKTLSWLESQEEKPDPSEIKKIAA
Sbjct: 210 SRSKPHESEIAQSRQSNLSRDCFSPSKLKKWAIDDYHKTLSWLESQEEKPDPSEIKKIAA 269

Query: 252 EGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISKEELCRQATDSK 311
           EGILTCLQDAIDSLHQNQDINQM EEWKFVPQVVEELAKLSNKKESISK+ELCR ATDSK
Sbjct: 270 EGILTCLQDAIDSLHQNQDINQMIEEWKFVPQVVEELAKLSNKKESISKDELCRHATDSK 329

Query: 312 SIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEIDVAFHKVVCKN 371
           SIYEVELNSLL+ SPERKKK  +KKESK G ETKEYDSDDTIEMTEEEIDVAFHKVVCKN
Sbjct: 330 SIYEVELNSLLDGSPERKKKGNIKKESKKGRETKEYDSDDTIEMTEEEIDVAFHKVVCKN 389

Query: 372 S 373
           S
Sbjct: 390 S 390

[Close]

BLAST of CSPI07G21130 vs. ExPASy TrEMBL
Match: A0A6J1GQV2 (DNA-repair protein XRCC1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456640 PE=4 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 3.1e-175
Identity = 321/371 (86.52%), Postives = 337/371 (90.84%), Query Frame = 0


Query: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60
           MSNSKANEGGG+AKRSLPSWMSGKD GSTSRGKKPNSS S  ND+M EAEEP+QEK  GE
Sbjct: 1   MSNSKANEGGGNAKRSLPSWMSGKDGGSTSRGKKPNSSCSGQNDVMAEAEEPRQEKVIGE 60

Query: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120
           GPVSSSLH DF+RLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP
Sbjct: 61  GPVSSSLHTDFTRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180
           NTPKFRQVESDCGTIVSKEWISECYAQ++LVDIESYLL+AGKPWRR +  REATQ  P+P
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQRKLVDIESYLLHAGKPWRRSNEPREATQAFPTP 180

Query: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQ+ VEK S LK HE EIAQSR    SR+CFSPSKLKKWAIDDYHKTLSWL+SQEEK
Sbjct: 181 SKKPQKPVEKNSRLKSHEQEIAQSREIISSRECFSPSKLKKWAIDDYHKTLSWLDSQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKL +KKESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLRSKKESISK 300

Query: 301 EELCRQATDSKSIYEVELNSLLESSPERKKK-RIVKKESKNGHETKEYDSDDTIEMTEEE 360
           EELCR ATDSK IYEVELNSLL SSPERKKK   + KE KNGH+ KEYDSDDTIEMTEEE
Sbjct: 301 EELCRHATDSKRIYEVELNSLLASSPERKKKPPNINKELKNGHKAKEYDSDDTIEMTEEE 360

Query: 361 IDVAFHKVVCK 371
           ID+AF KV CK
Sbjct: 361 IDIAFQKVACK 371

[Close]

BLAST of CSPI07G21130 vs. NCBI nr
Match: XP_004135823.1 (DNA-repair protein XRCC1 [Cucumis sativus] >XP_031745260.1 DNA-repair protein XRCC1 [Cucumis sativus] >KGN45337.1 hypothetical protein Csa_016136 [Cucumis sativus])

HSP 1 Score: 736.9 bits (1901), Expect = 8.8e-209
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0


Query: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60
           MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE
Sbjct: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60

Query: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120
           GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP
Sbjct: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180
           NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180

Query: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300

Query: 301 EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI 360
           EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI
Sbjct: 301 EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI 360

Query: 361 DVAFHKVVCKNS 373
           DVAFHKVVCKNS
Sbjct: 361 DVAFHKVVCKNS 372

[Close]

BLAST of CSPI07G21130 vs. NCBI nr
Match: XP_016902642.1 (PREDICTED: DNA-repair protein XRCC1 isoform X2 [Cucumis melo])

HSP 1 Score: 687.2 bits (1772), Expect = 8.0e-194
Identity = 348/372 (93.55%), Postives = 355/372 (95.43%), Query Frame = 0


Query: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60
           MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSS SVGNDLM+EAEEPKQ+KGNGE
Sbjct: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSGSVGNDLMIEAEEPKQQKGNGE 60

Query: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120
           GPVSSSLH DFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP
Sbjct: 61  GPVSSSLHRDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180
           NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRR DLS EATQDIPS 
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRSDLSHEATQDIPSE 180

Query: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQ+VVEK S  KPHE EIAQSR+SN SRDCFSPSKLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 SKKPQKVVEKVSRSKPHESEIAQSRQSNLSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQM EEWKFVPQVVEELAKLSNKKESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMIEEWKFVPQVVEELAKLSNKKESISK 300

Query: 301 EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI 360
           +ELCR ATDSKSIYEVELNSLL+ SPERKKK  +KKESK G ETKEYDSDDTIEMTEEEI
Sbjct: 301 DELCRHATDSKSIYEVELNSLLDGSPERKKKGNIKKESKKGRETKEYDSDDTIEMTEEEI 360

Query: 361 DVAFHKVVCKNS 373
           DVAFHKVVCKNS
Sbjct: 361 DVAFHKVVCKNS 372

[Close]

BLAST of CSPI07G21130 vs. NCBI nr
Match: KAA0058803.1 (DNA-repair protein XRCC1 isoform X2 [Cucumis melo var. makuwa] >TYK10598.1 DNA-repair protein XRCC1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 684.1 bits (1764), Expect = 6.7e-193
Identity = 347/372 (93.28%), Postives = 353/372 (94.89%), Query Frame = 0


Query: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60
           MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSS SVGNDLM+EAEEPKQ+KGNGE
Sbjct: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSGSVGNDLMIEAEEPKQQKGNGE 60

Query: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120
            PVSSSLH DFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP
Sbjct: 61  SPVSSSLHRDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180
           NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRR DLS EATQDIPS 
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRSDLSHEATQDIPSE 180

Query: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240
            KKPQ+VVEK S  KPHE EIAQSRRSN SRDCFSPSKLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 FKKPQKVVEKVSRSKPHESEIAQSRRSNLSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300
           PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQM EEWKFVPQVVEELAKLSNKKESISK
Sbjct: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMIEEWKFVPQVVEELAKLSNKKESISK 300

Query: 301 EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI 360
           +ELCR ATDSKSIYEVELNSLL+ SPERKKK  +KKESK G ETKEYDSDDTIEMTEEEI
Sbjct: 301 DELCRHATDSKSIYEVELNSLLDGSPERKKKGNIKKESKKGRETKEYDSDDTIEMTEEEI 360

Query: 361 DVAFHKVVCKNS 373
           DVAFHKVVCKNS
Sbjct: 361 DVAFHKVVCKNS 372

[Close]

BLAST of CSPI07G21130 vs. NCBI nr
Match: XP_016902641.1 (PREDICTED: DNA-repair protein XRCC1 isoform X1 [Cucumis melo])

HSP 1 Score: 668.3 bits (1723), Expect = 3.8e-188
Identity = 337/361 (93.35%), Postives = 344/361 (95.29%), Query Frame = 0


Query: 12  SAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGEGPVSSSLHHDF 71
           SAKRSLPSWMSGKDDGSTSRGKKPNSS SVGNDLM+EAEEPKQ+KGNGEGPVSSSLH DF
Sbjct: 30  SAKRSLPSWMSGKDDGSTSRGKKPNSSGSVGNDLMIEAEEPKQQKGNGEGPVSSSLHRDF 89

Query: 72  SRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPNTPKFRQVESD 131
           SRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPNTPKFRQVESD
Sbjct: 90  SRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPNTPKFRQVESD 149

Query: 132 CGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSPSKKPQRVVEKT 191
           CGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRR DLS EATQDIPS SKKPQ+VVEK 
Sbjct: 150 CGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRSDLSHEATQDIPSESKKPQKVVEKV 209

Query: 192 SHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEKPDPSEIKKIAA 251
           S  KPHE EIAQSR+SN SRDCFSPSKLKKWAIDDYHKTLSWLESQEEKPDPSEIKKIAA
Sbjct: 210 SRSKPHESEIAQSRQSNLSRDCFSPSKLKKWAIDDYHKTLSWLESQEEKPDPSEIKKIAA 269

Query: 252 EGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISKEELCRQATDSK 311
           EGILTCLQDAIDSLHQNQDINQM EEWKFVPQVVEELAKLSNKKESISK+ELCR ATDSK
Sbjct: 270 EGILTCLQDAIDSLHQNQDINQMIEEWKFVPQVVEELAKLSNKKESISKDELCRHATDSK 329

Query: 312 SIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEIDVAFHKVVCKN 371
           SIYEVELNSLL+ SPERKKK  +KKESK G ETKEYDSDDTIEMTEEEIDVAFHKVVCKN
Sbjct: 330 SIYEVELNSLLDGSPERKKKGNIKKESKKGRETKEYDSDDTIEMTEEEIDVAFHKVVCKN 389

Query: 372 S 373
           S
Sbjct: 390 S 390

[Close]

BLAST of CSPI07G21130 vs. NCBI nr
Match: XP_038899733.1 (DNA-repair protein XRCC1 [Benincasa hispida] >XP_038899734.1 DNA-repair protein XRCC1 [Benincasa hispida] >XP_038899736.1 DNA-repair protein XRCC1 [Benincasa hispida])

HSP 1 Score: 639.0 bits (1647), Expect = 2.5e-179
Identity = 326/372 (87.63%), Postives = 341/372 (91.67%), Query Frame = 0


Query: 1   MSNSKANEGGGSAKRSLPSWMSGKDDGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGE 60
           MS+SK NEGGG+AKRSLPSWMSGKDDGS+SRGKKPNSS SVGND  VEA+EPKQEKGNGE
Sbjct: 1   MSDSKTNEGGGNAKRSLPSWMSGKDDGSSSRGKKPNSSGSVGND--VEAKEPKQEKGNGE 60

Query: 61  GPVSSSLHHDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120
           GPVSSSLH DFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP
Sbjct: 61  GPVSSSLHRDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP 120

Query: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP 180
           NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRR +L+REA Q +PS 
Sbjct: 121 NTPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRSNLAREANQAVPSS 180

Query: 181 SKKPQRVVEKTSHLKPHEPEIAQSRRSNFSRDCFSPSKLKKWAIDDYHKTLSWLESQEEK 240
           SKKPQ+ VEK S LKPHE EIAQSR  N SR+CFSP KLKKWAIDDYHKTLSWLESQEEK
Sbjct: 181 SKKPQKPVEKASRLKPHEQEIAQSREINSSRECFSPLKLKKWAIDDYHKTLSWLESQEEK 240

Query: 241 PDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLSNKKESISK 300
           PDP EIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKL NKKESISK
Sbjct: 241 PDPCEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLGNKKESISK 300

Query: 301 EELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEMTEEEI 360
           EELCR A+DSK IYE+ELNSLL+SS ERKKK  V KE KNG + KEYDSDDTIEMTE+EI
Sbjct: 301 EELCRHASDSKRIYEIELNSLLDSSTERKKKPNVNKEPKNGRKPKEYDSDDTIEMTEDEI 360

Query: 361 DVAFHKVVCKNS 373
           D+AF KV CK S
Sbjct: 361 DIAFQKVACKKS 370

[Close]

BLAST of CSPI07G21130 vs. TAIR 10
Match: AT1G80420.1 (BRCT domain-containing DNA repair protein )

HSP 1 Score: 332.4 bits (851), Expect = 4.6e-91
Identity = 195/373 (52.28%), Postives = 247/373 (66.22%), Query Frame = 0


Query: 12  SAKRSLPSWMSGKD---DGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGEGPVSSSLH 71
           S KR+LPSWMS +D     S S  KKP              E P +E  +   P + S H
Sbjct: 2   SQKRNLPSWMSSRDPEITPSKSHCKKPKD------------EGPTEEHNSRNAPSNKSEH 61

Query: 72  -------HDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPN 131
                   +FS+L+EGVVFVLSGFVNPERS LRSQAL MGA Y+PDWN+  TLLICAFPN
Sbjct: 62  AEPSSNTTEFSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPN 121

Query: 132 TPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP- 191
           TPKFRQVE++ GTI+SKEWI+ECYAQK+LVDIE YL++AGKPWR+    ++A ++     
Sbjct: 122 TPKFRQVETNGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHL 181

Query: 192 SKKPQRVVEKTSHLKPHEPEIAQSRRS--NFSRDCFSPSKLKKWAIDDYHKTLSWLESQE 251
           SKKP++ VEK +  +   P  +   RS  N  ++ F  +++KKWA DD  +T+SWLESQE
Sbjct: 182 SKKPEKQVEKKTETR-GTPSTSSKNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQE 241

Query: 252 EKPDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKL--SNKKE 311
           EKP+P EIK+IAAEG+LTCLQDAIDSL Q QDI  +TE W FVP+VV+EL K+  S+KKE
Sbjct: 242 EKPEPGEIKRIAAEGVLTCLQDAIDSLEQKQDIGSVTELWSFVPRVVKELGKMESSSKKE 301

Query: 312 --SISKEELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIE 368
             + SKEE+C+QA   K IYE EL     + P         ++         YDSD T+E
Sbjct: 302 NSTASKEEVCKQAKSWKKIYEAEL-----AKP--------GEDESTSRVACGYDSDMTVE 348

[Close]

BLAST of CSPI07G21130 vs. TAIR 10
Match: AT1G80420.2 (BRCT domain-containing DNA repair protein )

HSP 1 Score: 332.4 bits (851), Expect = 4.6e-91
Identity = 195/373 (52.28%), Postives = 247/373 (66.22%), Query Frame = 0


Query: 12  SAKRSLPSWMSGKD---DGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGEGPVSSSLH 71
           S KR+LPSWMS +D     S S  KKP              E P +E  +   P + S H
Sbjct: 2   SQKRNLPSWMSSRDPEITPSKSHCKKPKD------------EGPTEEHNSRNAPSNKSEH 61

Query: 72  -------HDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPN 131
                   +FS+L+EGVVFVLSGFVNPERS LRSQAL MGA Y+PDWN+  TLLICAFPN
Sbjct: 62  AEPSSNTTEFSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPN 121

Query: 132 TPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP- 191
           TPKFRQVE++ GTI+SKEWI+ECYAQK+LVDIE YL++AGKPWR+    ++A ++     
Sbjct: 122 TPKFRQVETNGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHL 181

Query: 192 SKKPQRVVEKTSHLKPHEPEIAQSRRS--NFSRDCFSPSKLKKWAIDDYHKTLSWLESQE 251
           SKKP++ VEK +  +   P  +   RS  N  ++ F  +++KKWA DD  +T+SWLESQE
Sbjct: 182 SKKPEKQVEKKTETR-GTPSTSSKNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQE 241

Query: 252 EKPDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKL--SNKKE 311
           EKP+P EIK+IAAEG+LTCLQDAIDSL Q QDI  +TE W FVP+VV+EL K+  S+KKE
Sbjct: 242 EKPEPGEIKRIAAEGVLTCLQDAIDSLEQKQDIGSVTELWSFVPRVVKELGKMESSSKKE 301

Query: 312 --SISKEELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIE 368
             + SKEE+C+QA   K IYE EL     + P         ++         YDSD T+E
Sbjct: 302 NSTASKEEVCKQAKSWKKIYEAEL-----AKP--------GEDESTSRVACGYDSDMTVE 348

[Close]

BLAST of CSPI07G21130 vs. TAIR 10
Match: AT1G80420.3 (BRCT domain-containing DNA repair protein )

HSP 1 Score: 332.4 bits (851), Expect = 4.6e-91
Identity = 195/373 (52.28%), Postives = 247/373 (66.22%), Query Frame = 0


Query: 12  SAKRSLPSWMSGKD---DGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGEGPVSSSLH 71
           S KR+LPSWMS +D     S S  KKP              E P +E  +   P + S H
Sbjct: 2   SQKRNLPSWMSSRDPEITPSKSHCKKPKD------------EGPTEEHNSRNAPSNKSEH 61

Query: 72  -------HDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPN 131
                   +FS+L+EGVVFVLSGFVNPERS LRSQAL MGA Y+PDWN+  TLLICAFPN
Sbjct: 62  AEPSSNTTEFSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPN 121

Query: 132 TPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSP- 191
           TPKFRQVE++ GTI+SKEWI+ECYAQK+LVDIE YL++AGKPWR+    ++A ++     
Sbjct: 122 TPKFRQVETNGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHL 181

Query: 192 SKKPQRVVEKTSHLKPHEPEIAQSRRS--NFSRDCFSPSKLKKWAIDDYHKTLSWLESQE 251
           SKKP++ VEK +  +   P  +   RS  N  ++ F  +++KKWA DD  +T+SWLESQE
Sbjct: 182 SKKPEKQVEKKTETR-GTPSTSSKNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQE 241

Query: 252 EKPDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKL--SNKKE 311
           EKP+P EIK+IAAEG+LTCLQDAIDSL Q QDI  +TE W FVP+VV+EL K+  S+KKE
Sbjct: 242 EKPEPGEIKRIAAEGVLTCLQDAIDSLEQKQDIGSVTELWSFVPRVVKELGKMESSSKKE 301

Query: 312 --SISKEELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIE 368
             + SKEE+C+QA   K IYE EL     + P         ++         YDSD T+E
Sbjct: 302 NSTASKEEVCKQAKSWKKIYEAEL-----AKP--------GEDESTSRVACGYDSDMTVE 348

[Close]

BLAST of CSPI07G21130 vs. TAIR 10
Match: AT1G80420.4 (BRCT domain-containing DNA repair protein )

HSP 1 Score: 319.3 bits (817), Expect = 4.1e-87
Identity = 189/372 (50.81%), Postives = 239/372 (64.25%), Query Frame = 0


Query: 12  SAKRSLPSWMSGKD---DGSTSRGKKPNSSASVGNDLMVEAEEPKQEKGNGEGPVSSSLH 71
           S KR+LPSWMS +D     S S  KKP              E P +E  +   P + S H
Sbjct: 2   SQKRNLPSWMSSRDPEITPSKSHCKKPKD------------EGPTEEHNSRNAPSNKSEH 61

Query: 72  -------HDFSRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFPN 131
                   +FS+L+EGVVFVLSGFVNPERS LRSQAL MGA Y+PDWN+  TLLICAFPN
Sbjct: 62  AEPSSNTTEFSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPN 121

Query: 132 TPKFRQVESDCGTIVSKEWISECYAQKRLVDIESYLLYAGKPWRRCDLSREATQDIPSPS 191
           TPKFRQVE++ GTI+SKEWI+ECYAQK+LVDIE YL++AGKPWR+    ++A ++     
Sbjct: 122 TPKFRQVETNGGTIISKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANRE----- 181

Query: 192 KKPQRVVEKTSHLKPHEPEIAQSRRS--NFSRDCFSPSKLKKWAIDDYHKTLSWLESQEE 251
                  +  S+       +  S RS  N  ++ F  +++KKWA DD  +T+SWLESQEE
Sbjct: 182 -------KSFSYCTASLRCLVDSNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQEE 241

Query: 252 KPDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKL--SNKKE- 311
           KP+P EIK+IAAEG+LTCLQDAIDSL Q QDI  +TE W FVP+VV+EL K+  S+KKE 
Sbjct: 242 KPEPGEIKRIAAEGVLTCLQDAIDSLEQKQDIGSVTELWSFVPRVVKELGKMESSSKKEN 301

Query: 312 -SISKEELCRQATDSKSIYEVELNSLLESSPERKKKRIVKKESKNGHETKEYDSDDTIEM 368
            + SKEE+C+QA   K IYE EL     + P         ++         YDSD T+EM
Sbjct: 302 STASKEEVCKQAKSWKKIYEAEL-----AKP--------GEDESTSRVACGYDSDMTVEM 336

The following BLAST results are available for this feature:

BLAST of CSPI07G21130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q24JK4	6.5e-90	52.28	DNA-repair protein XRCC1 OS=Arabidopsis thaliana OX=3702 GN=XRCC1 PE=1 SV=1	[more]
Q9ESZ0	2.6e-22	48.15	DNA repair protein XRCC1 OS=Rattus norvegicus OX=10116 GN=Xrcc1 PE=1 SV=2	[more]
P18887	1.7e-21	38.85	DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=2	[more]
Q60596	2.4e-20	37.97	DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2	[more]
O54935	2.1e-19	35.82	DNA repair protein XRCC1 OS=Cricetulus griseus OX=10029 GN=XRCC1 PE=2 SV=1	[more]

BLAST of CSPI07G21130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAC1	4.2e-209	100.00	BRCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G440580 PE=4 S...	[more]
A0A1S4E338	3.9e-194	93.55	DNA-repair protein XRCC1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499750 PE=4...	[more]
A0A5A7USA9	3.3e-193	93.28	DNA-repair protein XRCC1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S4E335	1.9e-188	93.35	DNA-repair protein XRCC1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499750 PE=4...	[more]
A0A6J1GQV2	3.1e-175	86.52	DNA-repair protein XRCC1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11145664...	[more]

BLAST of CSPI07G21130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135823.1	8.8e-209	100.00	DNA-repair protein XRCC1 [Cucumis sativus] >XP_031745260.1 DNA-repair protein XR...	[more]
XP_016902642.1	8.0e-194	93.55	PREDICTED: DNA-repair protein XRCC1 isoform X2 [Cucumis melo]	[more]
KAA0058803.1	6.7e-193	93.28	DNA-repair protein XRCC1 isoform X2 [Cucumis melo var. makuwa] >TYK10598.1 DNA-r...	[more]
XP_016902641.1	3.8e-188	93.35	PREDICTED: DNA-repair protein XRCC1 isoform X1 [Cucumis melo]	[more]
XP_038899733.1	2.5e-179	87.63	DNA-repair protein XRCC1 [Benincasa hispida] >XP_038899734.1 DNA-repair protein ...	[more]

BLAST of CSPI07G21130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80420.1	4.6e-91	52.28	BRCT domain-containing DNA repair protein	[more]
AT1G80420.2	4.6e-91	52.28	BRCT domain-containing DNA repair protein	[more]
AT1G80420.3	4.6e-91	52.28	BRCT domain-containing DNA repair protein	[more]
AT1G80420.4	4.1e-87	50.81	BRCT domain-containing DNA repair protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001357	BRCT domain	SMART	SM00292	BRCT_7	coord: 1..75 e-value: 6.9E-4 score: 28.9
IPR001357	BRCT domain	PFAM	PF00533	BRCT	coord: 3..71 e-value: 8.7E-9 score: 35.6
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 1..85 score: 16.371981
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 1..85 e-value: 3.1E-24 score: 87.2
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 3..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..281
None	No IPR available	PANTHER	PTHR11370:SF5	DNA REPAIR PROTEIN XRCC1	coord: 3..299
None	No IPR available	PANTHER	PTHR11370	DNA-REPAIR PROTEIN XRCC1	coord: 3..299
IPR045080	XRCC1, first (central) BRCT domain	CDD	cd17725	BRCT_XRCC1_rpt1	coord: 4..83 e-value: 1.86669E-48 score: 154.356

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G21130.1	CSPI07G21130.1	mRNA
CSPI07G21130.2	CSPI07G21130.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006303	double-strand break repair via nonhomologous end joining
biological_process	GO:0000012	single strand break repair
molecular_function	GO:0003684	damaged DNA binding