CSPI07G18160 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G18160
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	cytochrome c oxidase subunit 5C-like
Location	Chr7: 16283434 .. 16285383 (-)
RNA-Seq Expression	CSPI07G18160
Synteny	CSPI07G18160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGTGGCTTGACGTGTTCAAGTGGGCCCACTCGCTCGCTTCCAATCGGCAAAGCGAAAATTGAGTCTTAAAAGAGAGTTTGGACGCAGCAGACCATAAACAAAGTTTCCAGGCGCCATCCCATCGCTTCTCATCTCCTCCGGTATAAACCCTAACTTTTCTTCTAGATCCACCCTTCTTCTTTATTTTCCCATCTTTCTCTCTGCTTTCCTTTTCCTTAATCTTTGGTTTTTTTATTTTTATTTCATCGTTTAATTTCATCTGATTTTGGGTATGTTGAATCTATGCCGTTCATGTATTTCTCTTTATTTGTTGAAATGAGGATTCGTATTCTTTTCGATTTGGATTTTTTGTATCTGAATTTGATTTGGGGTTGGTGTAAGGATTGGGTTCTGTTTTGGGCCTTGCCCCCTTTTTTTGGGCAAAACCTAGTTTCGATTTTCCTTGGGTATAGATTTTGAGAGACTGCGATTGTATGCTGATTTGTTTGAATGGATTTCTCGGGTTTTGATGTGTTGACTTAGTGGCAGACTCTTTTTTTCTTTTTCTGGATACTTTGGAGTTTTTTCGAATGGATTAATCGCTCCCCTTTGGTAACCGATTTATGCATTTTATGTGAGCGGAAGCCTATCCTAGGGTTCGTTGTCATGTGCGTTTTCCTTAACGTAGAGAAATGCAGTGTTGGAATAGAGGAAATACAATACAACATAGGATGAGTGGATGAGAAATTCAATCATAACAGCAAGAGGCTAGATTAGTAGGTGCTCAGGGGATTCATCGTAATATCAACAAAGTTAGTACAGAATGTTGTTGAATAAGACTGCCAGCCATCATCCATTGTCTCTCAATCGAGATTCTGTGATAGATTACATTGTTTGATGGTGGAGAAAGTTGTCTCATTTTCTTTTCAAGGATAAGGGAGGCGTCTTGTCTTGTGGATGATGCTCTTTTGAGCTATTGTGTAGTGCATTTGAGTTAAGGGAACAGAGTGAACATGAAGGGGTGATTATAACTTGGGAGGAGGTTAGATCCTTAGGGAGGTCCAGACCTCCTCCCTTTGGTTGTGTGTAACTAGAAAATTTTGTGATTATTTTTTATTTTGTACCATTGGACCCTTTTTCTTTAGAGGCTTTTGACTTTTTCCTTTACTCCCTTCGACTTGGGCTGATTTATTTTTTGTATTGCAAGTAAAATAATAATAATAACTACAAACGAACTCCAAAGTTTTGGTACTGAAGTAGTGAGAATTAGCATTATTTCTTCTTAAATGATGAAGGTTTTCGTTGAACTTTCCCTTTGTCCTTGCAACTAGTTCTGAACTATGCTGGTGCAAGTACTTCTTAACAGATGAAAGTAGAAAACATTATGTGTTTAAATGTTTTCTTGTTCTTATGAGTGTTTTTCTTTAATCACCTTGGGCAGATTTTCTTACCGTTTTCAAACGTGAAAAGCAAATGGCTGCAGGCAGGGTGGCTCATGTCACACTACAAGGACCGAGTGTTGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATTTACTGGAGAAGGGTGAGATCAGTGTCGTTGTTGATGAAGAATAGATCTTACACTCTTATCATGATATTATGGAACACATTCACCAGCTTGTGTTTATCATTTTAATTTTTTTGAAAACCTCTTTGTATTGCTCTTGGAACAGAGATGACATGTTTACGTTTTGCAACAAATTCTGCAAATAAGAGATGCGTGAGACAGATTTTGGTGGATTAATAAACCTTATTTCATGATTTGTTATTCTTTTGTGAATCACATTCGAATTCTCATTAGAGCCGGAAGCTGTCCTGGAATTCTGCAATGCGCTTTTTTTAGCAAATAATAGTAGTCGTGAATTTTTGTGGAGATC

mRNA sequence

CGGTGGCTTGACGTGTTCAAGTGGGCCCACTCGCTCGCTTCCAATCGGCAAAGCGAAAATTGAGTCTTAAAAGAGAGTTTGGACGCAGCAGACCATAAACAAAGTTTCCAGGCGCCATCCCATCGCTTCTCATCTCCTCCGATTTTCTTACCGTTTTCAAACGTGAAAAGCAAATGGCTGCAGGCAGGGTGGCTCATGTCACACTACAAGGACCGAGTGTTGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATTTACTGGAGAAGGGTGAGATCAGTGTCGTTGTTGATGAAGAATAGATCTTACACTCTTATCATGATATTATGGAACACATTCACCAGCTTGTGTTTATCATTTTAATTTTTTTGAAAACCTCTTTGTATTGCTCTTGGAACAGAGATGACATGTTTACGTTTTGCAACAAATTCTGCAAATAAGAGATGCGTGAGACAGATTTTGGTGGATTAATAAACCTTATTTCATGATTTGTTATTCTTTTGTGAATCACATTCGAATTCTCATTAGAGCCGGAAGCTGTCCTGGAATTCTGCAATGCGCTTTTTTTAGCAAATAATAGTAGTCGTGAATTTTTGTGGAGATC

Coding sequence (CDS)

ATGGCTGCAGGCAGGGTGGCTCATGTCACACTACAAGGACCGAGTGTTGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATTTACTGGAGAAGGGTGAGATCAGTGTCGTTGTTGATGAAGAATAG

Protein sequence

MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVVVDEE*

Homology

[Close]

BLAST of CSPI07G18160 vs. ExPASy Swiss-Prot
Match: Q42841 (Cytochrome c oxidase subunit 5C OS=Hordeum vulgare OX=4513 GN=COX5C PE=3 SV=3)

HSP 1 Score: 101.7 bits (252), Expect = 3.3e-21
Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MA GRVAH TL+GPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+ISVV
Sbjct: 1  MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVV 60

Query: 61 VDE 64
          V+E
Sbjct: 61 VEE 63

[Close]

BLAST of CSPI07G18160 vs. ExPASy Swiss-Prot
Match: Q8VY39 (Cytochrome c oxidase subunit 5C-2 OS=Helianthus annuus OX=4232 GN=COX5C2 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.3e-21
Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          M  GRVAH  L+GPSVVKE++ G  L L AG  WKMH WNEQRK RAFYDLLEKGEISVV
Sbjct: 1  MGGGRVAHPVLKGPSVVKELVIGTVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVV 60

Query: 61 VDEE 65
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of CSPI07G18160 vs. ExPASy Swiss-Prot
Match: Q9SXX7 (Cytochrome c oxidase subunit 5C OS=Oryza sativa subsp. japonica OX=39947 GN=COX5C PE=3 SV=3)

HSP 1 Score: 100.9 bits (250), Expect = 5.6e-21
Identity = 45/63 (71.43%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MA GR+AH TL+GPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+ISVV
Sbjct: 1  MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVV 60

Query: 61 VDE 64
          V+E
Sbjct: 61 VEE 63

[Close]

BLAST of CSPI07G18160 vs. ExPASy Swiss-Prot
Match: O22912 (Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana OX=3702 GN=At2g47380 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.8e-19
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MA  +VAH TL+GPSVVKE+  G+ L L AG  WKMH WNEQRK R FYDLLE+GEISVV
Sbjct: 1  MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 61 VDEE 65
            EE
Sbjct: 61 AAEE 64

[Close]

BLAST of CSPI07G18160 vs. ExPASy Swiss-Prot
Match: Q8VY40 (Cytochrome c oxidase subunit 5C-1 OS=Helianthus annuus OX=4232 GN=COX5C1 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.3e-19
Identity = 45/63 (71.43%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          M  GRVAH  L+GPS VKE++ G  L L AG  WKMH WNEQRK RAFYDLLEKGEISVV
Sbjct: 1  MVGGRVAHPVLKGPSEVKELIIGSVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVV 60

Query: 61 VDE 64
          V E
Sbjct: 61 VQE 63

[Close]

BLAST of CSPI07G18160 vs. ExPASy TrEMBL
Match: A0A1S3BRM0 (cytochrome c oxidase subunit 5C-like OS=Cucumis melo OX=3656 GN=LOC103492755 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.3e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 61 VDEE 65
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of CSPI07G18160 vs. ExPASy TrEMBL
Match: A0A5D3D2T3 (Cytochrome c oxidase subunit Vc OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001720 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.3e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 61 VDEE 65
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of CSPI07G18160 vs. ExPASy TrEMBL
Match: A0A0A0KB82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407690 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.3e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 61 VDEE 65
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of CSPI07G18160 vs. ExPASy TrEMBL
Match: A0A6J1D0G3 (cytochrome c oxidase subunit 5C-like OS=Momordica charantia OX=3673 GN=LOC111015881 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.0e-26
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          M AGRVAHVTL+GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 1  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 60

Query: 61 VDE 64
          VDE
Sbjct: 61 VDE 63

[Close]

BLAST of CSPI07G18160 vs. ExPASy TrEMBL
Match: A0A6J1L0D4 (cytochrome c oxidase subunit 5C-like OS=Cucurbita maxima OX=3661 GN=LOC111497928 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.8e-26
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MAAGRVAHVTL+GPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 1  MAAGRVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 60

Query: 61 VDEE 65
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of CSPI07G18160 vs. NCBI nr
Match: XP_004135996.1 (cytochrome c oxidase subunit 5C [Cucumis sativus] >XP_008451480.1 PREDICTED: cytochrome c oxidase subunit 5C-like [Cucumis melo] >XP_016901077.1 PREDICTED: cytochrome c oxidase subunit 5C-like [Cucumis melo] >KAA0046696.1 Cytochrome c oxidase subunit Vc [Cucumis melo var. makuwa] >TYK18232.1 Cytochrome c oxidase subunit Vc [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 1.7e-27
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 61 VDEE 65
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of CSPI07G18160 vs. NCBI nr
Match: KAE8646364.1 (hypothetical protein Csa_016441 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.7e-27
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
           MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 48  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 107

Query: 61  VDEE 65
           VDEE
Sbjct: 108 VDEE 111

[Close]

BLAST of CSPI07G18160 vs. NCBI nr
Match: XP_038897009.1 (cytochrome c oxidase subunit 5C-like [Benincasa hispida])

HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MAAGRVAHVTL+GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 1  MAAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 60

Query: 61 VDEE 65
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of CSPI07G18160 vs. NCBI nr
Match: XP_023548933.1 (cytochrome c oxidase subunit 5C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127.9 bits (320), Expect = 3.2e-26
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MAAGRVAHVTL+GPSVVKEILTGMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 1  MAAGRVAHVTLKGPSVVKEILTGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 60

Query: 61 VDEE 65
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of CSPI07G18160 vs. NCBI nr
Match: KAG6575770.1 (Multifunctional methyltransferase subunit TRM112-like B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127.1 bits (318), Expect = 5.5e-26
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1   MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
           MAAGRVAHVTLQGPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 114 MAAGRVAHVTLQGPSVVKEILIGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 173

Query: 61  VDEE 65
           VDEE
Sbjct: 174 VDEE 177

[Close]

BLAST of CSPI07G18160 vs. TAIR 10
Match: AT2G47380.1 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-20
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MA  +VAH TL+GPSVVKE+  G+ L L AG  WKMH WNEQRK R FYDLLE+GEISVV
Sbjct: 1  MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 61 VDEE 65
            EE
Sbjct: 61 AAEE 64

[Close]

BLAST of CSPI07G18160 vs. TAIR 10
Match: AT5G61310.1 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 95.5 bits (236), Expect = 1.7e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 61 VDEE 65
          V EE
Sbjct: 61 VTEE 64

[Close]

BLAST of CSPI07G18160 vs. TAIR 10
Match: AT5G61310.2 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 95.5 bits (236), Expect = 1.7e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 61 VDEE 65
          V EE
Sbjct: 61 VTEE 64

[Close]

BLAST of CSPI07G18160 vs. TAIR 10
Match: AT5G61310.3 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 95.5 bits (236), Expect = 1.7e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 61 VDEE 65
          V EE
Sbjct: 61 VTEE 64

[Close]

BLAST of CSPI07G18160 vs. TAIR 10
Match: AT5G61310.4 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 95.5 bits (236), Expect = 1.7e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 61 VDEE 65
          V EE
Sbjct: 61 VTEE 64

The following BLAST results are available for this feature:

BLAST of CSPI07G18160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42841	3.3e-21	73.02	Cytochrome c oxidase subunit 5C OS=Hordeum vulgare OX=4513 GN=COX5C PE=3 SV=3	[more]
Q8VY39	4.3e-21	75.00	Cytochrome c oxidase subunit 5C-2 OS=Helianthus annuus OX=4232 GN=COX5C2 PE=3 SV...	[more]
Q9SXX7	5.6e-21	71.43	Cytochrome c oxidase subunit 5C OS=Oryza sativa subsp. japonica OX=39947 GN=COX5...	[more]
O22912	1.8e-19	68.75	Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q8VY40	2.3e-19	71.43	Cytochrome c oxidase subunit 5C-1 OS=Helianthus annuus OX=4232 GN=COX5C1 PE=3 SV...	[more]

BLAST of CSPI07G18160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRM0	8.3e-28	100.00	cytochrome c oxidase subunit 5C-like OS=Cucumis melo OX=3656 GN=LOC103492755 PE=...	[more]
A0A5D3D2T3	8.3e-28	100.00	Cytochrome c oxidase subunit Vc OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KB82	8.3e-28	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407690 PE=3 SV=1	[more]
A0A6J1D0G3	6.0e-26	95.24	cytochrome c oxidase subunit 5C-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1L0D4	7.8e-26	93.75	cytochrome c oxidase subunit 5C-like OS=Cucurbita maxima OX=3661 GN=LOC111497928...	[more]

BLAST of CSPI07G18160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135996.1	1.7e-27	100.00	cytochrome c oxidase subunit 5C [Cucumis sativus] >XP_008451480.1 PREDICTED: cyt...	[more]
KAE8646364.1	1.7e-27	100.00	hypothetical protein Csa_016441 [Cucumis sativus]	[more]
XP_038897009.1	1.5e-26	96.88	cytochrome c oxidase subunit 5C-like [Benincasa hispida]	[more]
XP_023548933.1	3.2e-26	95.31	cytochrome c oxidase subunit 5C-like [Cucurbita pepo subsp. pepo]	[more]
KAG6575770.1	5.5e-26	95.31	Multifunctional methyltransferase subunit TRM112-like B, partial [Cucurbita argy...	[more]

BLAST of CSPI07G18160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47380.1	1.3e-20	68.75	Cytochrome c oxidase subunit Vc family protein	[more]
AT5G61310.1	1.7e-20	67.19	Cytochrome c oxidase subunit Vc family protein	[more]
AT5G61310.2	1.7e-20	67.19	Cytochrome c oxidase subunit Vc family protein	[more]
AT5G61310.3	1.7e-20	67.19	Cytochrome c oxidase subunit Vc family protein	[more]
AT5G61310.4	1.7e-20	67.19	Cytochrome c oxidase subunit Vc family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34372:SF2	CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED	coord: 1..64
IPR008432	Cytochrome c oxidase subunit 5c	PANTHER	PTHR34372	CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED	coord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G18160.2	CSPI07G18160.2	mRNA
CSPI07G18160.1	CSPI07G18160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005746	mitochondrial respirasome