CSPI07G17960 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G17960
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	zinc finger protein 6-like
Location	Chr7: 16137745 .. 16138486 (+)
RNA-Seq Expression	CSPI07G17960
Synteny	CSPI07G17960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTTTTAAAAAGGATTTAAATTAAGTTAGTACCTTTTTAATAAGTTGAAAAATAAAATTGTACAATGTGCAATGCTTTCAAAATTCACATCAACAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGGCTATAAATGTAGCCTACATCATCATCATCATCATCAATAAATAAGAGAAAAAAACCATACAAAAACAAATTAAGCTCCGTCCAATAAAATGTCCAATCACAACCCCTCCTCCATCCTAAAGCTTTTTGGCTTCCCATTGGTCGAACACGACGACAATCCCCCGGAGACACCTGACGGCGCCGGTGGCGCTGACACTACTATTTCCGAAGACGATAGAAAGTTTCGCTGCCAGTTCTGCCGCCGAGTTTTCGCCAACTCCCAAGCCCTCGGTGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAGCGCGCCCTTTATTTCCACGCCGCCGCACTTCGACCACCATCGCTTTATTCCAGTGTTTTCCCTTCCAACATTGGCGGTGATGGGGGTGCTTCTAGAATTCTGCATCGGAACAATAACAGTAACGGGTACTTCACGGAGACGGCGGCGTACGGCGGCGTATCGGCATCATCAGGGAGGTGGATGTTTGGGAATTCGAGTGAAGGAAATATGGAAAATTCAGGTTGTAAATTGGGAGGTGAAAAGGGATTGTGTGTTGATCTTCATCTTAAACTCTCTCCATCTAATTCCTCAACTTAA

mRNA sequence

AAGTTTTAAAAAGGATTTAAATTAAGTTAGTACCTTTTTAATAAGTTGAAAAATAAAATTGTACAATGTGCAATGCTTTCAAAATTCACATCAACAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATGGCTATAAATGTAGCCTACATCATCATCATCATCATCAATAAATAAGAGAAAAAAACCATACAAAAACAAATTAAGCTCCGTCCAATAAAATGTCCAATCACAACCCCTCCTCCATCCTAAAGCTTTTTGGCTTCCCATTGGTCGAACACGACGACAATCCCCCGGAGACACCTGACGGCGCCGGTGGCGCTGACACTACTATTTCCGAAGACGATAGAAAGTTTCGCTGCCAGTTCTGCCGCCGAGTTTTCGCCAACTCCCAAGCCCTCGGTGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAGCGCGCCCTTTATTTCCACGCCGCCGCACTTCGACCACCATCGCTTTATTCCAGTGTTTTCCCTTCCAACATTGGCGGTGATGGGGGTGCTTCTAGAATTCTGCATCGGAACAATAACAGTAACGGGTACTTCACGGAGACGGCGGCGTACGGCGGCGTATCGGCATCATCAGGGAGGTGGATGTTTGGGAATTCGAGTGAAGGAAATATGGAAAATTCAGGTTGTAAATTGGGAGGTGAAAAGGGATTGTGTGTTGATCTTCATCTTAAACTCTCTCCATCTAATTCCTCAACTTAA

Coding sequence (CDS)

ATGTCCAATCACAACCCCTCCTCCATCCTAAAGCTTTTTGGCTTCCCATTGGTCGAACACGACGACAATCCCCCGGAGACACCTGACGGCGCCGGTGGCGCTGACACTACTATTTCCGAAGACGATAGAAAGTTTCGCTGCCAGTTCTGCCGCCGAGTTTTCGCCAACTCCCAAGCCCTCGGTGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAGCGCGCCCTTTATTTCCACGCCGCCGCACTTCGACCACCATCGCTTTATTCCAGTGTTTTCCCTTCCAACATTGGCGGTGATGGGGGTGCTTCTAGAATTCTGCATCGGAACAATAACAGTAACGGGTACTTCACGGAGACGGCGGCGTACGGCGGCGTATCGGCATCATCAGGGAGGTGGATGTTTGGGAATTCGAGTGAAGGAAATATGGAAAATTCAGGTTGTAAATTGGGAGGTGAAAAGGGATTGTGTGTTGATCTTCATCTTAAACTCTCTCCATCTAATTCCTCAACTTAA

Protein sequence

MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST*

Homology

[Close]

BLAST of CSPI07G17960 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10
Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 7  SSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNA 66
          +S LKLFG  L+E      ++ +   G+ +    + RK+ CQ+C R FANSQALGGHQNA
Sbjct: 5  TSSLKLFGINLLETTSVQNQSSEPRPGSGS--GSESRKYECQYCCREFANSQALGGHQNA 64

Query: 67 HKRERQRAKRA 78
          HK+ERQ  KRA
Sbjct: 65 HKKERQLLKRA 73

[Close]

BLAST of CSPI07G17960 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-09
Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 10 LKLFGFPL-VEHDDNPPETPDGAGGADTTISED--DRKFRCQFCRRVFANSQALGGHQNA 69
          ++LFGF     H+++  E+ D     + +I +D  +++F+C +C R F  SQALGGHQNA
Sbjct: 19 IRLFGFEFGASHEES--ESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNA 78

Query: 70 HKRERQRAKR-ALYFHAAA 85
          HKRERQ+ KR  L+ +AAA
Sbjct: 79 HKRERQQTKRFNLHSNAAA 95

[Close]

BLAST of CSPI07G17960 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-08
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 2  SNHNPSSILKLFGFPLVEHDDNPPET--PDGAGGADTTISEDDRKFRCQFCRRVFANSQA 61
          S  +    +KLFGF L+     P  T     +   +TT     ++  CQ+C + FANSQA
Sbjct: 15 SGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQA 74

Query: 62 LGGHQNAHKRERQRAKR 77
          LGGHQNAHK+ER + KR
Sbjct: 75 LGGHQNAHKKERLKKKR 91

[Close]

BLAST of CSPI07G17960 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.9e-08
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 42  DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA 78
           +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Sbjct: 70  ERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRA 105

[Close]

BLAST of CSPI07G17960 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.5e-08
Identity = 40/112 (35.71%), Postives = 51/112 (45.54%), Query Frame = 0


Query: 21  DDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL-- 80
           ++   E   G    D      +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  
Sbjct: 67  EEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSS 126

Query: 81  YFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYFTETAAYGGVSA 131
           YF+     P S                    H  + +NG  T   +YGG S+
Sbjct: 127 YFYHPDNNPYS------------------YRHYPSWTNGPLTAARSYGGFSS 160

[Close]

BLAST of CSPI07G17960 vs. ExPASy TrEMBL
Match: A0A0A0K5R1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G406990 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 9.5e-95
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQAL 60
           MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQAL
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQAL 60

Query: 61  GGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYFT 120
           GGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYFT
Sbjct: 61  GGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYFT 120

Query: 121 ETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST 174
           ETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST
Sbjct: 121 ETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST 173

[Close]

BLAST of CSPI07G17960 vs. ExPASy TrEMBL
Match: A0A1S3BSU1 (zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103492887 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.7e-83
Identity = 163/177 (92.09%), Postives = 164/177 (92.66%), Query Frame = 0


Query: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQ 60
           MSNHNPSSILKLFGFPLVEHDDNPPETPDG  GGADTTI S+DDRKFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGD--GGASRILHRNNNSN 120
           ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN GGD  GG SRIL R  N N
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNFGGDGGGGGSRILPR--NGN 120

Query: 121 GYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST 174
           GYF ETAAYGGVSASSGRWMFGNSSEG MENSGCKLGGEKGLCVDLHLKLSPSNSST
Sbjct: 121 GYFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGLCVDLHLKLSPSNSST 175

[Close]

BLAST of CSPI07G17960 vs. ExPASy TrEMBL
Match: A0A5D3D1T3 (Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001500 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.3e-83
Identity = 163/180 (90.56%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQ 60
           MSNHNPSSILKLFGFPLVEHDDNPPETPDG  GGADTTI S+DDRKFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGD-----GGASRILHRNN 120
           ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN GGD     GG SRIL R  
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNFGGDGGGGGGGGSRILPR-- 120

Query: 121 NSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST 174
           N NGYF ETAAYGGVSASSGRWMFGNSSEG MENSGCKLGGEKGLCVDLHLKLSPSNSST
Sbjct: 121 NGNGYFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGLCVDLHLKLSPSNSST 178

[Close]

BLAST of CSPI07G17960 vs. ExPASy TrEMBL
Match: A0A6J1KTC7 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111498055 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.6e-54
Identity = 125/180 (69.44%), Postives = 131/180 (72.78%), Query Frame = 0


Query: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQAL 60
           MSN NPS+ILKLFGFPLVEHDD PP TPDG GG DT  S+ DRKFRCQFC RVFANSQAL
Sbjct: 1   MSNQNPSTILKLFGFPLVEHDDLPPATPDGGGGDDTN-SDYDRKFRCQFCHRVFANSQAL 60

Query: 61  GGHQNAHKRERQRAKRALYFH------AAALRPPSLYSSVFPSNIGGDGGASRILHRNNN 120
           GGHQNAHKRERQRAKRALYFH      AAALRPP  YSSVFP++IGG GG         +
Sbjct: 61  GGHQNAHKRERQRAKRALYFHASDHHLAAALRPPPFYSSVFPAHIGGGGGHRGYRFLPRS 120

Query: 121 SNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGL-----CVDLHLKLSPS 170
            +GYF  TAAYGGVSA SGRWMFGNS E          GGEKG       VDLHLKLSPS
Sbjct: 121 DHGYF--TAAYGGVSAGSGRWMFGNSGE----------GGEKGSTDDVDVVDLHLKLSPS 167

[Close]

BLAST of CSPI07G17960 vs. ExPASy TrEMBL
Match: A0A6J1JX90 (zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488312 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.8e-51
Identity = 120/168 (71.43%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 5   NPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQ 64
           N  SILKLFGFPLVEH+   PETP+G+GG     S+DDRKFRCQFCRRVFANSQALGGHQ
Sbjct: 12  NKMSILKLFGFPLVEHNGVQPETPEGSGG--DINSDDDRKFRCQFCRRVFANSQALGGHQ 71

Query: 65  NAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYFTETAA 124
           NAHKRERQRAKRALYFH  ALRPP LY++V+P+NIG  G  SRIL R+ N   YF  TAA
Sbjct: 72  NAHKRERQRAKRALYFH--ALRPPPLYTNVYPANIGSSGD-SRILPRSRNE--YF--TAA 131

Query: 125 YGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGL-----CVDLHLKLS 168
           YGGVSASSGRWMF     G ME+SGCKL GEKGL      VDLHLKL+
Sbjct: 132 YGGVSASSGRWMF-----GKMESSGCKLDGEKGLPNHVGAVDLHLKLT 165

[Close]

BLAST of CSPI07G17960 vs. NCBI nr
Match: XP_011659780.1 (zinc finger protein 6 [Cucumis sativus] >KGN44995.1 hypothetical protein Csa_016555 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 2.0e-94
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQAL 60
           MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQAL
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQAL 60

Query: 61  GGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYFT 120
           GGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYFT
Sbjct: 61  GGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYFT 120

Query: 121 ETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST 174
           ETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST
Sbjct: 121 ETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST 173

[Close]

BLAST of CSPI07G17960 vs. NCBI nr
Match: XP_008451655.1 (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 317.4 bits (812), Expect = 7.7e-83
Identity = 163/177 (92.09%), Postives = 164/177 (92.66%), Query Frame = 0


Query: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQ 60
           MSNHNPSSILKLFGFPLVEHDDNPPETPDG  GGADTTI S+DDRKFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGD--GGASRILHRNNNSN 120
           ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN GGD  GG SRIL R  N N
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNFGGDGGGGGSRILPR--NGN 120

Query: 121 GYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST 174
           GYF ETAAYGGVSASSGRWMFGNSSEG MENSGCKLGGEKGLCVDLHLKLSPSNSST
Sbjct: 121 GYFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGLCVDLHLKLSPSNSST 175

[Close]

BLAST of CSPI07G17960 vs. NCBI nr
Match: KAA0046676.1 (zinc finger protein 6-like [Cucumis melo var. makuwa] >TYK18211.1 zinc finger protein 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82
Identity = 163/180 (90.56%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDG-AGGADTTI-SEDDRKFRCQFCRRVFANSQ 60
           MSNHNPSSILKLFGFPLVEHDDNPPETPDG  GGADTTI S+DDRKFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGD-----GGASRILHRNN 120
           ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSN GGD     GG SRIL R  
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNFGGDGGGGGGGGSRILPR-- 120

Query: 121 NSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSST 174
           N NGYF ETAAYGGVSASSGRWMFGNSSEG MENSGCKLGGEKGLCVDLHLKLSPSNSST
Sbjct: 121 NGNGYFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGLCVDLHLKLSPSNSST 178

[Close]

BLAST of CSPI07G17960 vs. NCBI nr
Match: XP_038896349.1 (zinc finger protein 6-like [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 6.1e-72
Identity = 148/175 (84.57%), Postives = 152/175 (86.86%), Query Frame = 0


Query: 1   MSNHNP-SSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQA 60
           MSN +P SSILKLFGFPLVEHDDNPPETP+ A G DT   +DDRKFRCQFCRRVFANSQA
Sbjct: 1   MSNQSPSSSILKLFGFPLVEHDDNPPETPN-AAGIDTNFDDDDRKFRCQFCRRVFANSQA 60

Query: 61  LGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNIGGDG-GASRILHRNNNSNGY 120
           LGGHQNAHKRERQRAKRALYFHAAALRPPSLYS VFP+NIGG G G SRIL R  N NGY
Sbjct: 61  LGGHQNAHKRERQRAKRALYFHAAALRPPSLYSGVFPTNIGGAGAGGSRILPR--NGNGY 120

Query: 121 F-TETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSS 173
           F    AAYGGVSASSGRWMFGNS E  MENSGCKLGGEKGLCVDLHLKLSPSNSS
Sbjct: 121 FAAAAAAYGGVSASSGRWMFGNSGEEKMENSGCKLGGEKGLCVDLHLKLSPSNSS 172

[Close]

BLAST of CSPI07G17960 vs. NCBI nr
Match: KAG7025578.1 (Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.0 bits (567), Expect = 2.0e-54
Identity = 126/182 (69.23%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQAL 60
           MSN NPSSILKLFGFPLVEHDD PP TPDG GG DT  S+ DRKFRCQFC RVFANSQAL
Sbjct: 1   MSNQNPSSILKLFGFPLVEHDDLPPATPDGGGGDDTN-SDYDRKFRCQFCHRVFANSQAL 60

Query: 61  GGHQNAHKRERQRAKRALYFHAA-------------ALRPPSLYSSVFPSNIGGDGGASR 120
           GGHQNAHKRERQRAKRALYFHA+             ALRPP  YSSVFP+NIGG     R
Sbjct: 61  GGHQNAHKRERQRAKRALYFHASDHHLAAAAAAAAVALRPPPFYSSVFPANIGGGHRGYR 120

Query: 121 ILHRNNNSNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLS 170
            L R  + NGYF  TAAYGGVSA SGRWMFGNS EG  + S   +G      VDLHLKLS
Sbjct: 121 FLPR--SENGYF--TAAYGGVSAGSGRWMFGNSGEGGEKGSTDDVG-----VVDLHLKLS 172

[Close]

BLAST of CSPI07G17960 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 67.8 bits (164), Expect = 9.9e-12
Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 7  SSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNA 66
          +S LKLFG  L+E      ++ +   G+ +    + RK+ CQ+C R FANSQALGGHQNA
Sbjct: 5  TSSLKLFGINLLETTSVQNQSSEPRPGSGS--GSESRKYECQYCCREFANSQALGGHQNA 64

Query: 67 HKRERQRAKRA 78
          HK+ERQ  KRA
Sbjct: 65 HKKERQLLKRA 73

[Close]

BLAST of CSPI07G17960 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.2e-10
Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 10 LKLFGFPL-VEHDDNPPETPDGAGGADTTISED--DRKFRCQFCRRVFANSQALGGHQNA 69
          ++LFGF     H+++  E+ D     + +I +D  +++F+C +C R F  SQALGGHQNA
Sbjct: 19 IRLFGFEFGASHEES--ESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNA 78

Query: 70 HKRERQRAKR-ALYFHAAA 85
          HKRERQ+ KR  L+ +AAA
Sbjct: 79 HKRERQQTKRFNLHSNAAA 95

[Close]

BLAST of CSPI07G17960 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 61.6 bits (148), Expect = 7.1e-10
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 2  SNHNPSSILKLFGFPLVEHDDNPPET--PDGAGGADTTISEDDRKFRCQFCRRVFANSQA 61
          S  +    +KLFGF L+     P  T     +   +TT     ++  CQ+C + FANSQA
Sbjct: 15 SGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQA 74

Query: 62 LGGHQNAHKRERQRAKR 77
          LGGHQNAHK+ER + KR
Sbjct: 75 LGGHQNAHKKERLKKKR 91

[Close]

BLAST of CSPI07G17960 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 42  DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA 78
           +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Sbjct: 70  ERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRA 105

[Close]

BLAST of CSPI07G17960 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 4.6e-09
Identity = 40/112 (35.71%), Postives = 51/112 (45.54%), Query Frame = 0


Query: 21  DDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL-- 80
           ++   E   G    D      +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  
Sbjct: 67  EEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSS 126

Query: 81  YFHAAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYFTETAAYGGVSA 131
           YF+     P S                    H  + +NG  T   +YGG S+
Sbjct: 127 YFYHPDNNPYS------------------YRHYPSWTNGPLTAARSYGGFSS 160

The following BLAST results are available for this feature:

BLAST of CSPI07G17960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39265	1.4e-10	50.70	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q9FG05	4.5e-09	45.57	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
Q39264	1.0e-08	42.86	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9C9H1	2.9e-08	72.22	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q84WI0	6.5e-08	35.71	Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1	[more]

BLAST of CSPI07G17960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5R1	9.5e-95	100.00	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G406990 P...	[more]
A0A1S3BSU1	3.7e-83	92.09	zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103492887 PE=4 SV=1	[more]
A0A5D3D1T3	8.3e-83	90.56	Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1KTC7	1.6e-54	69.44	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111498055 PE=4 S...	[more]
A0A6J1JX90	3.8e-51	71.43	zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488312 PE=4 SV=1	[more]

BLAST of CSPI07G17960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659780.1	2.0e-94	100.00	zinc finger protein 6 [Cucumis sativus] >KGN44995.1 hypothetical protein Csa_016...	[more]
XP_008451655.1	7.7e-83	92.09	PREDICTED: zinc finger protein 6-like [Cucumis melo]	[more]
KAA0046676.1	1.7e-82	90.56	zinc finger protein 6-like [Cucumis melo var. makuwa] >TYK18211.1 zinc finger pr...	[more]
XP_038896349.1	6.1e-72	84.57	zinc finger protein 6-like [Benincasa hispida]	[more]
KAG7025578.1	2.0e-54	69.23	Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CSPI07G17960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67030.1	9.9e-12	50.70	zinc finger protein 6	[more]
AT5G06650.1	3.2e-10	45.57	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G10480.1	7.1e-10	42.86	zinc finger protein 5	[more]
AT1G68360.1	2.1e-09	72.22	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G58070.1	4.6e-09	35.71	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 34..84 e-value: 5.7E-6 score: 28.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..37
None	No IPR available	PANTHER	PTHR46353:SF11	ZINC FINGER PROTEIN 6-LIKE	coord: 1..171
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 1..171
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 47..67
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 45..72 score: 11.447647
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 41..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G17960.1	CSPI07G17960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding