CSPI07G17720 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTGGCAAGATGTTTCAAGCTCTTACCCACCCTTTTCTTAGTGTTTGTTTGGCAATATTGTGCTAAAGTTGGGGCCAGTGGCTTTTTCGACGACTTTGACAGCGGTTCATTTGGATCAAGTGGTGTTGGGATGCTAGTGATCAAGAATCGTGGCGTTGCACCTAACTCAAACATGATAGATCCTAAAGAATTAGCTCCCGAAACTACTCGTCCGATTGAGACTAAAACTACACAGAATAAAGATAACAAAGATTCATCATCCAATATCAAAATTACAGCTAATAACAGAAAGATTGGCACTACTGTTTCATATGATCGTATTAAAACTAATATGAAGATTGGTGGAAACATTGATCTTTTTGATCATGGAAGAATAATTATTCCAAAGATCCAAGTTTAA ATGGCTGTGGCAAGATGTTTCAAGCTCTTACCCACCCTTTTCTTAGTGTTTGTTTGGCAATATTGTGCTAAAGTTGGGGCCAGTGGCTTTTTCGACGACTTTGACAGCGGTTCATTTGGATCAAGTGGTGTTGGGATGCTAGTGATCAAGAATCGTGGCGTTGCACCTAACTCAAACATGATAGATCCTAAAGAATTAGCTCCCGAAACTACTCGTCCGATTGAGACTAAAACTACACAGAATAAAGATAACAAAGATTCATCATCCAATATCAAAATTACAGCTAATAACAGAAAGATTGGCACTACTGTTTCATATGATCGTATTAAAACTAATATGAAGATTGGTGGAAACATTGATCTTTTTGATCATGGAAGAATAATTATTCCAAAGATCCAAGTTTAA ATGGCTGTGGCAAGATGTTTCAAGCTCTTACCCACCCTTTTCTTAGTGTTTGTTTGGCAATATTGTGCTAAAGTTGGGGCCAGTGGCTTTTTCGACGACTTTGACAGCGGTTCATTTGGATCAAGTGGTGTTGGGATGCTAGTGATCAAGAATCGTGGCGTTGCACCTAACTCAAACATGATAGATCCTAAAGAATTAGCTCCCGAAACTACTCGTCCGATTGAGACTAAAACTACACAGAATAAAGATAACAAAGATTCATCATCCAATATCAAAATTACAGCTAATAACAGAAAGATTGGCACTACTGTTTCATATGATCGTATTAAAACTAATATGAAGATTGGTGGAAACATTGATCTTTTTGATCATGGAAGAATAATTATTCCAAAGATCCAAGTTTAA MAVARCFKLLPTLFLVFVWQYCAKVGASGFFDDFDSGSFGSSGVGMLVIKNRGVAPNSNMIDPKELAPETTRPIETKTTQNKDNKDSSSNIKITANNRKIGTTVSYDRIKTNMKIGGNIDLFDHGRIIIPKIQV* Homology
BLAST of CSPI07G17720 vs. ExPASy TrEMBL
Match: A0A0A0K668 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399270 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of CSPI07G17720 vs. ExPASy TrEMBL
Match: A0A5D3D1L6 (Keratin, type I cytoskeletal 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00710 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.2e-06 Identity = 49/126 (38.89%), Postives = 64/126 (50.79%), Query Frame = 0
BLAST of CSPI07G17720 vs. ExPASy TrEMBL
Match: A0A5A7VI20 (Keratin, type I cytoskeletal 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001710 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.8e-06 Identity = 49/126 (38.89%), Postives = 63/126 (50.00%), Query Frame = 0
BLAST of CSPI07G17720 vs. ExPASy TrEMBL
Match: A0A0A0K5G8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398120 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 7.8e-04 Identity = 45/126 (35.71%), Postives = 64/126 (50.79%), Query Frame = 0
BLAST of CSPI07G17720 vs. NCBI nr
Match: TYK18141.1 (keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa]) HSP 1 Score: 62.0 bits (149), Expect = 4.5e-06 Identity = 49/126 (38.89%), Postives = 64/126 (50.79%), Query Frame = 0
BLAST of CSPI07G17720 vs. NCBI nr
Match: KAA0067982.1 (keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa]) HSP 1 Score: 61.2 bits (147), Expect = 7.7e-06 Identity = 49/126 (38.89%), Postives = 63/126 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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