CSPI07G16350 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTGACCCTTTGCATTATTTATTTCATCTTCCTTTCAATCTCTAAAGTTTGTAGTTAGAAAAAGTTGTTGTTCCTAGAATTTCCCAAGTGTCCATGTGAAGATGTATAGAGAGAGAAGGAAAAGAAGAATACTTGAAAACCCAATATTTCTCTAAATCCAAAAGTTTGAGCAAAAAAAGCAAAAGGGGGAAGGAACATGGAAGGTAGAGCACATAACAAGCTTCATTACAATTTCTTAATCCTTCTTCTTCCATCTCATTCAGATTCTCTTCTCCTTCCCCTTTTTTGCCTCTAATGTAGCTCAAACAACCATCCCATTTACTCTCTTCCATTATTATTCCCTCTTCTGTAAGTTTCTTCTTCTTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTGTGTTTTTCAGATTTGATTTGGGTTTTATTGGAAATTGTTGGACTCATTGAAGTTTCTGTTTTTGGGATCTGGGACTTGGATGCAAATTTGAATTTGTTTTCAACTTTTTAGGGATTAGGTTACTCTGTTGGTACTAGGATTTGGGGTTTGTTTCTTTTGGCTTCTTGAGTTGTATGTTGGTTCTTGTTAACTTTATGAACTTGAGTTGTGTAATATTCAAATCTCTTCTAGTACTACAGAGAATACTGGAAATGATTTGTTTCCCCTGTTTTTCTTTTTTGTTATTATACTTGATGATGGAAGTTAGATTTGGCTTGTTCTAGGCTGTTTTTGGATAAGAACTTGGGATTCCTGGTCATTCTAAGTTGAATTGAAAGTGAAATTATATCTCAGACTAAAACTTGAAGGAACCTGAAATTCCTGTTGGCTACACTTGAGAACATGAAAGAAAAGAAGAACTTGTAACCTCCAAGTTGAAAAACTTAGTCTCCTTTTGATAACTATTTTATTTTTAGTTTTGGGTTCTTGAAAATTAAGCTTATACGCACTTCAGTCTCCTAAGCTTTTGTGTTTAGTTATCTGTTTGCTAATGTTTAAGCAAAGTTTTGAAAGCTGAAAGATAGTAGTTTTGGAAAAGGTTGTTTTTGTTTTTCGAAATTGACTTGTAACTTCAAATGTTTCTTTGACGAAGGTGAAGACCATAATTAAAATATTGGAAGGAAATGAGCATAAATTTTAAATAACATACAAAACTAAAAACAAAAAAAAATTCAAACATGATCTTAATGAATTAACAACATCCTTGGTGTTTCTCAATGTCGATTTAGGGTGGACGTAACCTTTGAGTTGGGAACTTAGTTACTTAATATGCTTGCTGTGTCTTGAAGCTGAATATGGAGCTTTCCTTTGGTCCATATAGTTCGAACGGAGTCGCCTTGTATTCAAAAACAATGATACAGATTTTCCTCCTTTTTTCAACACTTAACTTATATGACTCTCTCATGTTGTACATTCACATTTTATTTTCGCTACTACAGTCATACAATCTCTTACTATCTATCCATTGCAAAAGTTTTTTTTTCTTTTGTAATTTCTTTGGCAATGCTTCCCAGCCTCATCTTATCGATAAATGAAGGAATCGTCAAAGAAGTTGGGTTTAGAGTTGGTGGAGTCTCATGTGAAATTAGTAAGGGTAGGGCATGAGCATAATGCTAGGAGTGAGTTCATGAAATAGGGATTGAAAGGAAAATTGTTTACTTTTGATGAATAGTTTATATACAGAAGGGTCATCCACTTAGATTCTTGAATGTGCTGAGTTTTCCTGTGATTGCAGGAAACCTTTTCTCATTTTATCTTGAGCTTACGCCGAATGTACTACATAGTTTAGTTAGTTTTGAGTCATTCTCAGTTGAAAAGTTTACTGGAACTTGTGTGAAGACTTTGCAAAAAAAATTCAGCCAGGCCTTGAAATCATGATTTACTTGAGGCGTTTAACTGATAACCTTAAGCAGTCTTTCTCTTCCACTTGTGTTTAAAAAACCAAAAATTTGAACGTCAATCTGCCCTGTCCTTGTCTTTGAATAGCGTTTCTTCTGTTTATAATCATTCAATTGTATATCAATGAACTCGCATCTGGACTTGCATTGCTGTCTTTGGCTTACTTCGATCACTGAATTTAACAAAAAATTTACTATGCAGTATGCAGATTGGAGATGGCAGCTTCAGAACTCGAAGCCGAAGATGTTTGCTCTGATATCTACATTAACCTGGGCCTTAAGTCGTTGCGCAAAGGAGTCCGGAAAAATCCTCGGGTTCTCACGCTTCTTTCTTCACTTCTAGAAAGATCTGTAAAAAAGAATGAATTACTAATGGAGGCCACACAAGTTAAAGATGCTCGCACAATGTTTCATGGTCTACGAGCTCCTACCTTGAGTATTCGATGTTACATAGACCGGATCTTCAAGTATTTTGGCTGCAGTCCATCATGCTTTGTCATTGCTAATATTTATGTTGATCGATTCCTCAAGTGCACAGAGATTCAGTTAACTTCTCTCAACGTTCATCGACTGCTGATAACGAGCATAATGCTGGCTGCAAAGTTCATTGACGACTCGTAAGTGCCAATCATACAGAATTTGCACCTCTCGAATATTCTATCTTGTGATCCTTTGTTAACTTGATTTACTCGATTCTGCAGGTTCTTCAACAATGCCTATTATGCGAAAGTTGGGGGAGTAAGCACAGCGGAGATAAACAAACTGGAGATGAAGTTTTTGTTTAGTATCGACTTCCGACTTCAGGTGAATATACAGACATTCAGTCGATACTGTTATCAGTTGGAAAAAGAATGCACTGAAACACGTCAGATTGAACGCTCGATTCGAGCCTGTAGGATTAAGGAGAACTGGTCAAATAAAGATGAGAAATCTTGTGCTTCCACGACAGCCAGATGATTTTTTTACCACAAACCACTGTATGTAAAATCAATCACAACTTCCTTCAATTGCTTCATATATGATTCATTTAGAAAATTTGCATTGTTGATAAAGTTGGCCATTATTTCCGATGGTTTTTTTTTAAAAAAATTCTATTTTCTTGTGACTTTGTCTACATGTATGCATCGGTGAGAGTTCATTGGAGAAGTAGAAGAATACTGTTTGAAAATATATATATATATTTATAAATTGAATGGGGCAGTTCGCCACTTTTTATTTCATTACGAATTAGAATAAGGAGATATATGAACGTATGATTAAGGGATGTATCATTCATTCACTATTCAGATTGCAGTAATTATGATTTATTTTGGTGAGTTTGAGC AATTTGACCCTTTGCATTATTTATTTCATCTTCCTTTCAATCTCTAAAGTTTGTAGTTAGAAAAAGTTGTTGTTCCTAGAATTTCCCAAGTGTCCATGTGAAGATGTATAGAGAGAGAAGGAAAAGAAGAATACTTGAAAACCCAATATTTCTCTAAATCCAAAAGTTTGAGCAAAAAAAGCAAAAGGGGGAAGGAACATGGAAGGTAGAGCACATAACAAGCTTCATTACAATTTCTTAATCCTTCTTCTTCCATCTCATTCAGATTCTCTTCTCCTTCCCCTTTTTTGCCTCTAATGTAGCTCAAACAACCATCCCATTTACTCTCTTCCATTATTATTCCCTCTTCTTATGCAGATTGGAGATGGCAGCTTCAGAACTCGAAGCCGAAGATGTTTGCTCTGATATCTACATTAACCTGGGCCTTAAGTCGTTGCGCAAAGGAGTCCGGAAAAATCCTCGGGTTCTCACGCTTCTTTCTTCACTTCTAGAAAGATCTGTAAAAAAGAATGAATTACTAATGGAGGCCACACAAGTTAAAGATGCTCGCACAATGTTTCATGGTCTACGAGCTCCTACCTTGAGTATTCGATGTTACATAGACCGGATCTTCAAGTATTTTGGCTGCAGTCCATCATGCTTTGTCATTGCTAATATTTATGTTGATCGATTCCTCAAGTGCACAGAGATTCAGTTAACTTCTCTCAACGTTCATCGACTGCTGATAACGAGCATAATGCTGGCTGCAAAGTTCATTGACGACTCGTTCTTCAACAATGCCTATTATGCGAAAGTTGGGGGAGTAAGCACAGCGGAGATAAACAAACTGGAGATGAAGTTTTTGTTTAGTATCGACTTCCGACTTCAGGTGAATATACAGACATTCAGTCGATACTGTTATCAGTTGGAAAAAGAATGCACTGAAACACGTCAGATTGAACGCTCGATTCGAGCCTGTAGGATTAAGGAGAACTGGTCAAATAAAGATGAGAAATCTTGTGCTTCCACGACAGCCAGATGATTTTTTTACCACAAACCACTGTATGTAAAATCAATCACAACTTCCTTCAATTGCTTCATATATGATTCATTTAGAAAATTTGCATTGTTGATAAAGTTGGCCATTATTTCCGATGGTTTTTTTTTAAAAAAATTCTATTTTCTTGTGACTTTGTCTACATGTATGCATCGGTGAGAGTTCATTGGAGAAGTAGAAGAATACTGTTTGAAAATATATATATATATTTATAAATTGAATGGGGCAGTTCGCCACTTTTTATTTCATTACGAATTAGAATAAGGAGATATATGAACGTATGATTAAGGGATGTATCATTCATTCACTATTCAGATTGCAGTAATTATGATTTATTTTGGTGAGTTTGAGC ATGGCAGCTTCAGAACTCGAAGCCGAAGATGTTTGCTCTGATATCTACATTAACCTGGGCCTTAAGTCGTTGCGCAAAGGAGTCCGGAAAAATCCTCGGGTTCTCACGCTTCTTTCTTCACTTCTAGAAAGATCTGTAAAAAAGAATGAATTACTAATGGAGGCCACACAAGTTAAAGATGCTCGCACAATGTTTCATGGTCTACGAGCTCCTACCTTGAGTATTCGATGTTACATAGACCGGATCTTCAAGTATTTTGGCTGCAGTCCATCATGCTTTGTCATTGCTAATATTTATGTTGATCGATTCCTCAAGTGCACAGAGATTCAGTTAACTTCTCTCAACGTTCATCGACTGCTGATAACGAGCATAATGCTGGCTGCAAAGTTCATTGACGACTCGTTCTTCAACAATGCCTATTATGCGAAAGTTGGGGGAGTAAGCACAGCGGAGATAAACAAACTGGAGATGAAGTTTTTGTTTAGTATCGACTTCCGACTTCAGGTGAATATACAGACATTCAGTCGATACTGTTATCAGTTGGAAAAAGAATGCACTGAAACACGTCAGATTGAACGCTCGATTCGAGCCTGTAGGATTAAGGAGAACTGGTCAAATAAAGATGAGAAATCTTGTGCTTCCACGACAGCCAGATGA MAASELEAEDVCSDIYINLGLKSLRKGVRKNPRVLTLLSSLLERSVKKNELLMEATQVKDARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLLITSIMLAAKFIDDSFFNNAYYAKVGGVSTAEINKLEMKFLFSIDFRLQVNIQTFSRYCYQLEKECTETRQIERSIRACRIKENWSNKDEKSCASTTAR* Homology
BLAST of CSPI07G16350 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.6e-51 Identity = 103/198 (52.02%), Postives = 149/198 (75.25%), Query Frame = 0
BLAST of CSPI07G16350 vs. ExPASy Swiss-Prot
Match: Q8LB60 (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2) HSP 1 Score: 195.3 bits (495), Expect = 7.3e-49 Identity = 112/209 (53.59%), Postives = 143/209 (68.42%), Query Frame = 0
BLAST of CSPI07G16350 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 5.3e-39 Identity = 80/155 (51.61%), Postives = 109/155 (70.32%), Query Frame = 0
BLAST of CSPI07G16350 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.7e-37 Identity = 76/155 (49.03%), Postives = 113/155 (72.90%), Query Frame = 0
BLAST of CSPI07G16350 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.3e-34 Identity = 73/154 (47.40%), Postives = 110/154 (71.43%), Query Frame = 0
BLAST of CSPI07G16350 vs. ExPASy TrEMBL
Match: A0A0A0K7D6 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_7G389460 PE=3 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115 Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of CSPI07G16350 vs. ExPASy TrEMBL
Match: A0A1S3BRA2 (Cyclin OS=Cucumis melo OX=3656 GN=LOC103492671 PE=3 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 6.3e-112 Identity = 209/218 (95.87%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of CSPI07G16350 vs. ExPASy TrEMBL
Match: A0A5D3D4N5 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2032G00210 PE=3 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 1.8e-111 Identity = 208/218 (95.41%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of CSPI07G16350 vs. ExPASy TrEMBL
Match: A0A6J1GQB2 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111456524 PE=3 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 8.8e-106 Identity = 199/216 (92.13%), Postives = 207/216 (95.83%), Query Frame = 0
BLAST of CSPI07G16350 vs. ExPASy TrEMBL
Match: A0A6J1JZK0 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111488841 PE=3 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 7.5e-105 Identity = 200/219 (91.32%), Postives = 207/219 (94.52%), Query Frame = 0
BLAST of CSPI07G16350 vs. NCBI nr
Match: XP_011659305.1 (cyclin-P3-1 [Cucumis sativus] >XP_031745045.1 cyclin-P3-1 [Cucumis sativus] >KGN44814.1 hypothetical protein Csa_016034 [Cucumis sativus]) HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115 Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of CSPI07G16350 vs. NCBI nr
Match: XP_008451358.1 (PREDICTED: cyclin-P3-1 [Cucumis melo]) HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111 Identity = 209/218 (95.87%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of CSPI07G16350 vs. NCBI nr
Match: XP_038899829.1 (cyclin-P3-1 [Benincasa hispida]) HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111 Identity = 208/218 (95.41%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of CSPI07G16350 vs. NCBI nr
Match: KAA0064079.1 (cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18502.1 cyclin-P3-1 [Cucumis melo var. makuwa]) HSP 1 Score: 411.8 bits (1057), Expect = 3.8e-111 Identity = 208/218 (95.41%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of CSPI07G16350 vs. NCBI nr
Match: KAG6575905.1 (Cyclin-P3-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105 Identity = 202/219 (92.24%), Postives = 209/219 (95.43%), Query Frame = 0
BLAST of CSPI07G16350 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 ) HSP 1 Score: 195.3 bits (495), Expect = 5.2e-50 Identity = 112/209 (53.59%), Postives = 143/209 (68.42%), Query Frame = 0
BLAST of CSPI07G16350 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 ) HSP 1 Score: 162.5 bits (410), Expect = 3.7e-40 Identity = 80/155 (51.61%), Postives = 109/155 (70.32%), Query Frame = 0
BLAST of CSPI07G16350 vs. TAIR 10
Match: AT3G05327.1 (Cyclin family protein ) HSP 1 Score: 158.3 bits (399), Expect = 7.0e-39 Identity = 83/159 (52.20%), Postives = 112/159 (70.44%), Query Frame = 0
BLAST of CSPI07G16350 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 ) HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38 Identity = 76/155 (49.03%), Postives = 113/155 (72.90%), Query Frame = 0
BLAST of CSPI07G16350 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 ) HSP 1 Score: 147.9 bits (372), Expect = 9.5e-36 Identity = 73/154 (47.40%), Postives = 110/154 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|