CSPI07G16030 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G16030
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type domain-containing protein
Location	Chr7: 14685886 .. 14686335 (+)
RNA-Seq Expression	CSPI07G16030
Synteny	CSPI07G16030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTTGTCACCGTCACCTATGTCGCCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTGACGGTCTCCATGCTTCTTCTCATTGTGCTATTTTCATTCATTCTCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCAATCTTTCATTACAGCGGAGTTGAAGGCGACGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGATGGTTTAAGGTGGATGGCCATTGTCCAATTTGTCGTACCTCCGTTTGTGTGGTAGTCGTTGATCACGGTGGAAATGCCATGACTTCTTCTTCATCTTTACCGACCCCTTTCATCAACCAAATTTAA

mRNA sequence

ATGCCGTTGTCACCGTCACCTATGTCGCCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTGACGGTCTCCATGCTTCTTCTCATTGTGCTATTTTCATTCATTCTCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCAATCTTTCATTACAGCGGAGTTGAAGGCGACGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGATGGTTTAAGGTGGATGGCCATTGTCCAATTTGTCGTACCTCCGTTTGTGTGGTAGTCGTTGATCACGGTGGAAATGCCATGACTTCTTCTTCATCTTTACCGACCCCTTTCATCAACCAAATTTAA

Coding sequence (CDS)

ATGCCGTTGTCACCGTCACCTATGTCGCCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTGACGGTCTCCATGCTTCTTCTCATTGTGCTATTTTCATTCATTCTCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCAATCTTTCATTACAGCGGAGTTGAAGGCGACGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGATGGTTTAAGGTGGATGGCCATTGTCCAATTTGTCGTACCTCCGTTTGTGTGGTAGTCGTTGATCACGGTGGAAATGCCATGACTTCTTCTTCATCTTTACCGACCCCTTTCATCAACCAAATTTAA

Protein sequence

MPLSPSPMSPLHSLILLPGFIMDLLTVSMLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYSGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMTSSSSLPTPFINQI*

Homology

[Close]

BLAST of CSPI07G16030 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.6e-13
Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 44  RKRSAKSDGEELPENLDIEAPIFHYSGVE----GDEQECAICLCEIEEGEKCRKMKTCGH 103
           R  SA    + L + +  + PIF YS        +++EC++CL E EE ++ R +  CGH
Sbjct: 70  RTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGH 129

Query: 104 VFHKDCIDRWFKVDGHCPICRTSV--CVVVVDHGGNAMTSSSSLPT 144
            FH DCID WF+    CP+CR  V     V++ G ++ +S  + PT
Sbjct: 130 SFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPT 175

[Close]

BLAST of CSPI07G16030 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 8.4e-12
Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 64  PIFHYSGVEGDEQ---ECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 123
           P+FHY  + G +    +CA+CLCE E  +K R +  C H FH DCID W      CP+CR
Sbjct: 117 PVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176

Query: 124 TSVCVVVVDH 131
           +S+   +  H
Sbjct: 177 SSLLSDLSSH 186

[Close]

BLAST of CSPI07G16030 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 64  PIFHYS--GVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRT 123
           PIF YS    E   +EC++CL E EE ++ R +  CGHVFH DCID WF+    CP+CR 
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRA 156

[Close]

BLAST of CSPI07G16030 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.2e-11
Identity = 30/66 (45.45%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 72  EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHG 131
           EGD  ECAICL +  +GE+ R +  CGH FH +CID+W      CP CR  +  V  D  
Sbjct: 96  EGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVRCDRC 155

Query: 132 GNAMTS 138
           G+A T+
Sbjct: 156 GHASTA 161

[Close]

BLAST of CSPI07G16030 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.1e-11
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 72  EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCV 126
           E +E+EC ICL   EEGEK + +  C H +H +C+DRW K +  CP+CR S+ V
Sbjct: 101 EEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]

BLAST of CSPI07G16030 vs. ExPASy TrEMBL
Match: A0A0A0K790 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MPLSPSPMSPLHSLILLPGFIMDLLTVSMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60
           MPLSPSP+  LHSLILLPGFIMDLLTV MLLLIVLFSFILILCRKRSAKSDGEELPENLD
Sbjct: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70

Query: 61  IEAPIFHYSGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 120
           IEAPIFHY+GVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR
Sbjct: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130

Query: 121 TSVCVVVVDHGGNAMTSSSSLPTPFINQI 150
           TSVCVVVVDHGGNAM SSSSLPTPFINQI
Sbjct: 131 TSVCVVVVDHGGNAMASSSSLPTPFINQI 159

[Close]

BLAST of CSPI07G16030 vs. ExPASy TrEMBL
Match: A0A0A0LY10 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 5.0e-60
Identity = 118/147 (80.27%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MPLSPSPMSPLHSLILLPGFIMDLLTVSMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60
           M LSPSP+  LHSLILLP +I DLL  SM L IVL  FI ILCRKRSAKSD EE PEN+D
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVD 60

Query: 61  IEAPIFHYSGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 120
           IEAPIFHY G EG EQ+CAICLCEIEEGEKCRKMKTCGHVFHKDCI RWFKVDGHCPICR
Sbjct: 61  IEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPICR 120

Query: 121 TSVCVVVVDHGGNAMTSSSSLPTPFIN 148
           TSVCVVVVD GGNA+TSS+SL  P++N
Sbjct: 121 TSVCVVVVDRGGNAITSSTSLLIPYMN 147

[Close]

BLAST of CSPI07G16030 vs. ExPASy TrEMBL
Match: A0A0A0LUU6 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G512470 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.8e-58
Identity = 111/128 (86.72%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 22  MDLLTVSMLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYSGVEGDEQECAIC 81
           M L+TVSMLLLIVLF FI ILC KRSAK DGEE  +NLDIEAPIFHYSGVEG EQEC IC
Sbjct: 1   MVLMTVSMLLLIVLFLFIAILCTKRSAKYDGEESSDNLDIEAPIFHYSGVEGGEQECVIC 60

Query: 82  LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMTSSSSL 141
           LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+GHCPICRTSVC+VV+D GGNAM SSSSL
Sbjct: 61  LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCMVVIDRGGNAMASSSSL 120

Query: 142 PTPFINQI 150
           PTPFIN+I
Sbjct: 121 PTPFINRI 128

[Close]

BLAST of CSPI07G16030 vs. ExPASy TrEMBL
Match: A0A0A0LY13 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G521990 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 6.1e-50
Identity = 97/121 (80.17%), Postives = 106/121 (87.60%), Query Frame = 0


Query: 27  VSMLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYSGVEGDEQECAICLCEIE 86
           VSM L IVL  FI I+C KR AKSD EELP+N+D+EA +FHY+G EG EQE AICLCEIE
Sbjct: 2   VSMFLPIVLLFFISIVCSKRFAKSDVEELPKNVDLEALVFHYNGDEGGEQEYAICLCEIE 61

Query: 87  EGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMTSSSSLPTPFI 146
           EGEKCRKMKTCGHVFHKDCIDRWFKVD HCPICRTSVCVVVVDHGGNAM SS+SLP P++
Sbjct: 62  EGEKCRKMKTCGHVFHKDCIDRWFKVDDHCPICRTSVCVVVVDHGGNAMASSTSLPIPYM 121

Query: 147 N 148
           N
Sbjct: 122 N 122

[Close]

BLAST of CSPI07G16030 vs. ExPASy TrEMBL
Match: A0A5D3BEE2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002240 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.6e-48
Identity = 108/145 (74.48%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 1   MPLSPSPMSPLHSLILLPGFIMDLLTVSMLLLIVLFSFILILCRKRSAKSDGEE-LPENL 60
           +PL PSP+ PLHS I+LP  I DLL +SMLLL+VL   I ILC KRSAKSD EE L +N+
Sbjct: 11  LPLPPSPVPPLHSPIVLPRSIEDLLMLSMLLLLVLILVITILCGKRSAKSDEEESLSKNI 70

Query: 61  DIEAPIFHYSGVEGD-EQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPI 120
           DI+APIFHYS V+GD EQECAICLCEIEEGEKCRK+KTCGHVFHKDCIDRWF V+ HCP+
Sbjct: 71  DIQAPIFHYS-VDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRWFTVELHCPL 130

Query: 121 CRTSVCVVVVDHGGNAMTSSSSLPT 144
           CRTSVC VVVD   NAM SSSS PT
Sbjct: 131 CRTSVC-VVVDCSENAMASSSSFPT 153

[Close]

BLAST of CSPI07G16030 vs. NCBI nr
Match: XP_011659772.1 (RING-H2 finger protein ATL39 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 4.6e-76
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MPLSPSPMSPLHSLILLPGFIMDLLTVSMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60
           MPLSPSP+  LHSLILLPGFIMDLLTV MLLLIVLFSFILILCRKRSAKSDGEELPENLD
Sbjct: 1   MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60

Query: 61  IEAPIFHYSGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 120
           IEAPIFHY+GVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR
Sbjct: 61  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 120

Query: 121 TSVCVVVVDHGGNAMTSSSSLPTPFINQI 150
           TSVCVVVVDHGGNAM SSSSLPTPFINQI
Sbjct: 121 TSVCVVVVDHGGNAMASSSSLPTPFINQI 149

[Close]

BLAST of CSPI07G16030 vs. NCBI nr
Match: XP_011648512.2 (RING-H2 finger protein ATL79 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 2.7e-68
Identity = 131/149 (87.92%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MPLSPSPMSPLHSLILLPGFIMDLLTVSMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60
           MPLSPSP+ PLHS ILLPGF M L+TVSMLLLIVLF FI ILC KRSAKSDGEE  ENLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60

Query: 61  IEAPIFHYSGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 120
           IEAPIFHYSGVEGDEQEC ICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+GHCPICR
Sbjct: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICR 120

Query: 121 TSVCVVVVDHGGNAMTSSSSLPTPFINQI 150
           TSVC+VV+D GGNAM SSSSL TPFINQI
Sbjct: 121 TSVCMVVIDRGGNAMASSSSLLTPFINQI 149

[Close]

BLAST of CSPI07G16030 vs. NCBI nr
Match: XP_011659858.1 (E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67
Identity = 130/149 (87.25%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MPLSPSPMSPLHSLILLPGFIMDLLTVSMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60
           MPLSPSP+ PLHS ILLPGF M LLT+SMLLLIVLF FI ILC KRSAKSD EEL ENLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLD 60

Query: 61  IEAPIFHYSGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 120
           IEAPIFHY+ VEG EQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+GHCPICR
Sbjct: 61  IEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICR 120

Query: 121 TSVCVVVVDHGGNAMTSSSSLPTPFINQI 150
           TSVCVVV+D GGNAM SSSSLPTPFIN+I
Sbjct: 121 TSVCVVVIDRGGNAMASSSSLPTPFINRI 149

[Close]

BLAST of CSPI07G16030 vs. NCBI nr
Match: XP_004153928.3 (RING-H2 finger protein ATL67 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 6.7e-67
Identity = 128/149 (85.91%), Postives = 135/149 (90.60%), Query Frame = 0


Query: 1   MPLSPSPMSPLHSLILLPGFIMDLLTVSMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60
           MPLSPSP+ PLHS ILLPGF M L+TVSMLLLIVLF FI ILC KRSAK DGEE  +NLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKYDGEESSDNLD 60

Query: 61  IEAPIFHYSGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 120
           IEAPIFHYSGVE  EQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+GHCPICR
Sbjct: 61  IEAPIFHYSGVESGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICR 120

Query: 121 TSVCVVVVDHGGNAMTSSSSLPTPFINQI 150
           TSVC+VV+D GGNAM SSSSLPTPFIN+I
Sbjct: 121 TSVCMVVIDRGGNAMASSSSLPTPFINRI 149

[Close]

BLAST of CSPI07G16030 vs. NCBI nr
Match: XP_011648513.1 (RING-H2 finger protein ATL39 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 1.0e-59
Identity = 118/147 (80.27%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MPLSPSPMSPLHSLILLPGFIMDLLTVSMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60
           M LSPSP+  LHSLILLP +I DLL  SM L IVL  FI ILCRKRSAKSD EE PEN+D
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVD 60

Query: 61  IEAPIFHYSGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 120
           IEAPIFHY G EG EQ+CAICLCEIEEGEKCRKMKTCGHVFHKDCI RWFKVDGHCPICR
Sbjct: 61  IEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPICR 120

Query: 121 TSVCVVVVDHGGNAMTSSSSLPTPFIN 148
           TSVCVVVVD GGNA+TSS+SL  P++N
Sbjct: 121 TSVCVVVVDRGGNAITSSTSLLIPYMN 147

[Close]

BLAST of CSPI07G16030 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 5.4e-14
Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 44  RKRSAKSDGEELPENLDIEAPIFHYSGVE----GDEQECAICLCEIEEGEKCRKMKTCGH 103
           R  SA    + L + +  + PIF YS        +++EC++CL E EE ++ R +  CGH
Sbjct: 70  RTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGH 129

Query: 104 VFHKDCIDRWFKVDGHCPICRTSV--CVVVVDHGGNAMTSSSSLPT 144
            FH DCID WF+    CP+CR  V     V++ G ++ +S  + PT
Sbjct: 130 SFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPT 175

[Close]

BLAST of CSPI07G16030 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 5.9e-13
Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 64  PIFHYSGVEGDEQ---ECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 123
           P+FHY  + G +    +CA+CLCE E  +K R +  C H FH DCID W      CP+CR
Sbjct: 117 PVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176

Query: 124 TSVCVVVVDH 131
           +S+   +  H
Sbjct: 177 SSLLSDLSSH 186

[Close]

BLAST of CSPI07G16030 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 64  PIFHYS--GVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRT 123
           PIF YS    E   +EC++CL E EE ++ R +  CGHVFH DCID WF+    CP+CR 
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRA 156

[Close]

BLAST of CSPI07G16030 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12
Identity = 30/66 (45.45%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 72  EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHG 131
           EGD  ECAICL +  +GE+ R +  CGH FH +CID+W      CP CR  +  V  D  
Sbjct: 96  EGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVRCDRC 155

Query: 132 GNAMTS 138
           G+A T+
Sbjct: 156 GHASTA 161

[Close]

BLAST of CSPI07G16030 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 2.9e-12
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 72  EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCV 126
           E +E+EC ICL   EEGEK + +  C H +H +C+DRW K +  CP+CR S+ V
Sbjct: 101 EEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

The following BLAST results are available for this feature:

BLAST of CSPI07G16030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22255	7.6e-13	35.85	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q940Q4	8.4e-12	41.43	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9LZJ6	1.9e-11	50.00	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
O22755	3.2e-11	45.45	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
Q9SRM0	4.1e-11	48.15	RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1	[more]

BLAST of CSPI07G16030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K790	2.2e-76	95.97	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 P...	[more]
A0A0A0LY10	5.0e-60	80.27	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE...	[more]
A0A0A0LUU6	2.8e-58	86.72	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G512470 PE...	[more]
A0A0A0LY13	6.1e-50	80.17	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G521990 PE...	[more]
A0A5D3BEE2	2.6e-48	74.48	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of CSPI07G16030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659772.1	4.6e-76	95.97	RING-H2 finger protein ATL39 [Cucumis sativus]	[more]
XP_011648512.2	2.7e-68	87.92	RING-H2 finger protein ATL79 [Cucumis sativus]	[more]
XP_011659858.1	1.3e-67	87.25	E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]	[more]
XP_004153928.3	6.7e-67	85.91	RING-H2 finger protein ATL67 [Cucumis sativus]	[more]
XP_011648513.1	1.0e-59	80.27	RING-H2 finger protein ATL39 [Cucumis sativus]	[more]

BLAST of CSPI07G16030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47560.1	5.4e-14	35.85	RING/U-box superfamily protein	[more]
AT4G30400.1	5.9e-13	41.43	RING/U-box superfamily protein	[more]
AT3G62690.1	1.3e-12	50.00	AtL5	[more]
AT2G17450.1	2.3e-12	45.45	RING-H2 finger A3A	[more]
AT3G11110.1	2.9e-12	48.15	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 78..119 e-value: 1.9E-5 score: 34.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 77..120 e-value: 1.6E-13 score: 50.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 78..120 score: 12.636808
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 60..126 e-value: 3.8E-19 score: 69.7
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 55..133
None	No IPR available	PANTHER	PTHR45676:SF98	RING-H2 FINGER PROTEIN ATL2	coord: 55..133
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 71..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G16030.1	CSPI07G16030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane