CSPI07G15310 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G15310
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	transcription factor bHLH74-like
Location	Chr7: 13999740 .. 14000126 (-)
RNA-Seq Expression	CSPI07G15310
Synteny	CSPI07G15310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGTGTTGCTGGGCAGATTCTTGGTGGGTGTTCTTCAAATTACAAACATGGAGGAACTACAAACACTACACAAACATCACAAGAAAATTTACCATTATCTGTAGGATCGCCAACTGGTAAAATCAGAAAACGAGGCCTTGATTCAACTTTCCCATTTAACTCAAGTAAGGATTGTTCCAGTACAGAAGAAGAGAAAAATGCAGAAATGGAGCAAAATTTAGGTGGGAATTCACGTGGAAAATCAACTGGAAAACAAACTACTAAAGAGAAATCTAATAATAGTGTTGACTCTGATCCTAAGGAAAGTTATATTCATGTGAGAGCTAGAAGAGGGCAATTAGCCACAAATAGCCATAGCCTTGCTGAGAGGGTAAATTTCTAG

mRNA sequence

ATGTTTGGTGTTGCTGGGCAGATTCTTGGTGGGTGTTCTTCAAATTACAAACATGGAGGAACTACAAACACTACACAAACATCACAAGAAAATTTACCATTATCTGTAGGATCGCCAACTGGTAAAATCAGAAAACGAGGCCTTGATTCAACTTTCCCATTTAACTCAAGTAAGGATTGTTCCAGTACAGAAGAAGAGAAAAATGCAGAAATGGAGCAAAATTTAGGTGGGAATTCACGTGGAAAATCAACTGGAAAACAAACTACTAAAGAGAAATCTAATAATAGTGTTGACTCTGATCCTAAGGAAAGTTATATTCATGTGAGAGCTAGAAGAGGGCAATTAGCCACAAATAGCCATAGCCTTGCTGAGAGGGTAAATTTCTAG

Coding sequence (CDS)

ATGTTTGGTGTTGCTGGGCAGATTCTTGGTGGGTGTTCTTCAAATTACAAACATGGAGGAACTACAAACACTACACAAACATCACAAGAAAATTTACCATTATCTGTAGGATCGCCAACTGGTAAAATCAGAAAACGAGGCCTTGATTCAACTTTCCCATTTAACTCAAGTAAGGATTGTTCCAGTACAGAAGAAGAGAAAAATGCAGAAATGGAGCAAAATTTAGGTGGGAATTCACGTGGAAAATCAACTGGAAAACAAACTACTAAAGAGAAATCTAATAATAGTGTTGACTCTGATCCTAAGGAAAGTTATATTCATGTGAGAGCTAGAAGAGGGCAATTAGCCACAAATAGCCATAGCCTTGCTGAGAGGGTAAATTTCTAG

Protein sequence

MFGVAGQILGGCSSNYKHGGTTNTTQTSQENLPLSVGSPTGKIRKRGLDSTFPFNSSKDCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDPKESYIHVRARRGQLATNSHSLAERVNF*

Homology

[Close]

BLAST of CSPI07G15310 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-05
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 28  SQENLPLSVGSPTGKIRKRGLDSTFPFNSSKDCSSTEEEKNAEMEQNLGGNSRGKSTGKQ 87
           S+EN P+S  SP+    K     T   N  K  S + EEK  +  +    +   +  G+ 
Sbjct: 230 SKEN-PISTASPSPSFSK-----TAEKNGGKGGSKSSEEKGGKRRREEEDDEEEEGEGE- 289

Query: 88  TTKEKSNNSVDSDPKESYIHVRARRGQLATNSHSLAERV 127
               KSNN+   +P + YIHVRARRGQ AT+SHSLAERV
Sbjct: 290 --GNKSNNTKPPEPPKDYIHVRARRGQ-ATDSHSLAERV 318

[Close]

BLAST of CSPI07G15310 vs. ExPASy Swiss-Prot
Match: Q9CAA9 (Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.5e-05
Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 19  GGTTNTTQTSQEN--LPLSVGSPTGKIRKRGLDSTFPFNSSKDCSSTEE-EKNAEMEQN- 78
           G  +  TQ+S  N        S T K ++ G  ++    S +   S EE + N + ++N 
Sbjct: 212 GNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRND 271

Query: 79  -LGGNSRGK--STGKQTTKEKSNNSVDSDPKESYIHVRARRGQLATNSHSLAERV 127
               NS GK  ++GKQ  K+ S+      PK+ YIHVRARRGQ ATNSHSLAERV
Sbjct: 272 EQSPNSPGKKSNSGKQQGKQSSD-----PPKDGYIHVRARRGQ-ATNSHSLAERV 320

[Close]

BLAST of CSPI07G15310 vs. ExPASy Swiss-Prot
Match: Q6NKN9 (Transcription factor bHLH74 OS=Arabidopsis thaliana OX=3702 GN=BHLH74 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.5e-04
Identity = 35/89 (39.33%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 38  SPTGKIRKRGLDSTFPFNSSKDCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSV 97
           SP GK R    +S +      +  + EE +      N     + K+   + T  K ++  
Sbjct: 142 SPVGKRRLPEAESQW------NKKAVEEFQEDPQRGNDQSQKKHKNDQSKETVNKESSQS 201

Query: 98  DSDPKESYIHVRARRGQLATNSHSLAERV 127
           +  PKE+YIH+RARRGQ ATNSHSLAERV
Sbjct: 202 EEAPKENYIHMRARRGQ-ATNSHSLAERV 223

[Close]

BLAST of CSPI07G15310 vs. ExPASy Swiss-Prot
Match: Q9C670 (Transcription factor bHLH76 OS=Arabidopsis thaliana OX=3702 GN=BHLH76 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.2e-04
Identity = 35/86 (40.70%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 41  GKIRKRGLDSTFPFNSSKDCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSD 100
           G+   +G  S       KDC   EE+K  + EQ+   N+   ++ KQ +           
Sbjct: 166 GQTSSKGFSSKKRKRIGKDCEE-EEDKKQKDEQSPTSNANKTNSEKQPS---------DS 225

Query: 101 PKESYIHVRARRGQLATNSHSLAERV 127
            K+ YIH+RARRGQ ATNSHSLAERV
Sbjct: 226 LKDGYIHMRARRGQ-ATNSHSLAERV 240

[Close]

BLAST of CSPI07G15310 vs. ExPASy TrEMBL
Match: A0A5A7VFJ6 (Transcription factor bHLH74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001860 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.7e-45
Identity = 112/145 (77.24%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 2   FGVAGQILGGCSSNYKHGGTTNTTQTSQ--------ENLPLSVGSPTGKIRKRGLDSTFP 61
           FGVAGQILGGCSSNY++GGTTNTTQTSQ        ENLPLSVGSP GKIRKRGLDSTFP
Sbjct: 108 FGVAGQILGGCSSNYRNGGTTNTTQTSQENLPLTGEENLPLSVGSPNGKIRKRGLDSTFP 167

Query: 62  FNSSK------------DCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDP 121
           FNS+K            D SST+EEKNAEMEQNLGGNSRGKSTGKQ TKEKSNNS ++ P
Sbjct: 168 FNSNKKSDMKLKKDVSGDSSSTQEEKNAEMEQNLGGNSRGKSTGKQ-TKEKSNNSAEA-P 227

Query: 122 KESYIHVRARRGQLATNSHSLAERV 127
           KE+YIHVRARRGQ ATNSHSLAERV
Sbjct: 228 KENYIHVRARRGQ-ATNSHSLAERV 249

[Close]

BLAST of CSPI07G15310 vs. ExPASy TrEMBL
Match: A0A1S3BV77 (transcription factor bHLH74-like OS=Cucumis melo OX=3656 GN=LOC103493626 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.7e-45
Identity = 112/145 (77.24%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 2   FGVAGQILGGCSSNYKHGGTTNTTQTSQ--------ENLPLSVGSPTGKIRKRGLDSTFP 61
           FGVAGQILGGCSSNY++GGTTNTTQTSQ        ENLPLSVGSP GKIRKRGLDSTFP
Sbjct: 108 FGVAGQILGGCSSNYRNGGTTNTTQTSQENLPLTGEENLPLSVGSPNGKIRKRGLDSTFP 167

Query: 62  FNSSK------------DCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDP 121
           FNS+K            D SST+EEKNAEMEQNLGGNSRGKSTGKQ TKEKSNNS ++ P
Sbjct: 168 FNSNKKSDMKLKKDVSGDSSSTQEEKNAEMEQNLGGNSRGKSTGKQ-TKEKSNNSAEA-P 227

Query: 122 KESYIHVRARRGQLATNSHSLAERV 127
           KE+YIHVRARRGQ ATNSHSLAERV
Sbjct: 228 KENYIHVRARRGQ-ATNSHSLAERV 249

[Close]

BLAST of CSPI07G15310 vs. ExPASy TrEMBL
Match: A0A5D3D971 (Transcription factor bHLH74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002420 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.3e-44
Identity = 111/145 (76.55%), Postives = 118/145 (81.38%), Query Frame = 0


Query: 2   FGVAGQILGGCSSNYKHGGTTNTTQTSQ--------ENLPLSVGSPTGKIRKRGLDSTFP 61
           FGVAGQILGGCSSNY++GGTTNTTQTSQ        ENLPLSVGSP GKIRKRGLDSTFP
Sbjct: 108 FGVAGQILGGCSSNYRNGGTTNTTQTSQENLPLTGEENLPLSVGSPNGKIRKRGLDSTFP 167

Query: 62  FNSSK------------DCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDP 121
           FNS+K            D SST+EEKNAE EQNLGGNSRGKSTGKQ TKEKSNNS ++ P
Sbjct: 168 FNSNKKSDMKLKKDVSGDSSSTQEEKNAETEQNLGGNSRGKSTGKQ-TKEKSNNSAEA-P 227

Query: 122 KESYIHVRARRGQLATNSHSLAERV 127
           KE+YIHVRARRGQ ATNSHSLAERV
Sbjct: 228 KENYIHVRARRGQ-ATNSHSLAERV 249

[Close]

BLAST of CSPI07G15310 vs. ExPASy TrEMBL
Match: A0A0A0L0K5 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G645240 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.1e-43
Identity = 109/145 (75.17%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 2   FGVAGQILGGCSSNYKHGGTTNTTQTSQEN--------LPLSVGSPTGKIRKRGLDSTFP 61
           FGVAGQILGGCSSNY++GGTTNTTQTSQEN        LPLSVGSP GKIRKRGLDSTFP
Sbjct: 108 FGVAGQILGGCSSNYRNGGTTNTTQTSQENLPLAGEEILPLSVGSPNGKIRKRGLDSTFP 167

Query: 62  FNSSK------------DCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDP 121
           F+S+K            D SST+EEKNAEMEQN+GGNSRGKSTGKQ TKEKS+NS ++ P
Sbjct: 168 FSSNKKSDMKLKKDVSGDSSSTQEEKNAEMEQNIGGNSRGKSTGKQ-TKEKSSNSAEA-P 227

Query: 122 KESYIHVRARRGQLATNSHSLAERV 127
           KE+YIHVRARRGQ ATNSHSLAERV
Sbjct: 228 KENYIHVRARRGQ-ATNSHSLAERV 249

[Close]

BLAST of CSPI07G15310 vs. ExPASy TrEMBL
Match: A0A6J1CCD8 (transcription factor bHLH74 OS=Momordica charantia OX=3673 GN=LOC111010288 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.7e-36
Identity = 98/142 (69.01%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 2   FGVAGQILGGCSSNYKHGGTTNTTQTSQENLPLS-----VGSPTGKIRKRGLDSTFPFNS 61
           FG++GQILG C SNY++GGTTNT QT QENLPLS      GSP+GK RKR LDSTFPF+ 
Sbjct: 124 FGLSGQILGACPSNYRNGGTTNTAQT-QENLPLSGEDAAGGSPSGKTRKRALDSTFPFSP 183

Query: 62  SK------------DCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDPKES 121
           +K            D SST+EEKNAEMEQNLGGN RGK+TGKQ TK+KSNNS ++ PKE+
Sbjct: 184 NKKSEGKLKKDVSGDSSSTQEEKNAEMEQNLGGNFRGKATGKQ-TKDKSNNSGEA-PKEN 243

Query: 122 YIHVRARRGQLATNSHSLAERV 127
           YIHVRARRGQ ATNSHSLAERV
Sbjct: 244 YIHVRARRGQ-ATNSHSLAERV 261

[Close]

BLAST of CSPI07G15310 vs. NCBI nr
Match: XP_008452681.1 (PREDICTED: transcription factor bHLH74-like [Cucumis melo] >KAA0064471.1 transcription factor bHLH74-like [Cucumis melo var. makuwa])

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44
Identity = 112/145 (77.24%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 2   FGVAGQILGGCSSNYKHGGTTNTTQTSQ--------ENLPLSVGSPTGKIRKRGLDSTFP 61
           FGVAGQILGGCSSNY++GGTTNTTQTSQ        ENLPLSVGSP GKIRKRGLDSTFP
Sbjct: 108 FGVAGQILGGCSSNYRNGGTTNTTQTSQENLPLTGEENLPLSVGSPNGKIRKRGLDSTFP 167

Query: 62  FNSSK------------DCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDP 121
           FNS+K            D SST+EEKNAEMEQNLGGNSRGKSTGKQ TKEKSNNS ++ P
Sbjct: 168 FNSNKKSDMKLKKDVSGDSSSTQEEKNAEMEQNLGGNSRGKSTGKQ-TKEKSNNSAEA-P 227

Query: 122 KESYIHVRARRGQLATNSHSLAERV 127
           KE+YIHVRARRGQ ATNSHSLAERV
Sbjct: 228 KENYIHVRARRGQ-ATNSHSLAERV 249

[Close]

BLAST of CSPI07G15310 vs. NCBI nr
Match: TYK20117.1 (transcription factor bHLH74-like [Cucumis melo var. makuwa])

HSP 1 Score: 187.2 bits (474), Expect = 8.9e-44
Identity = 111/145 (76.55%), Postives = 118/145 (81.38%), Query Frame = 0


Query: 2   FGVAGQILGGCSSNYKHGGTTNTTQTSQ--------ENLPLSVGSPTGKIRKRGLDSTFP 61
           FGVAGQILGGCSSNY++GGTTNTTQTSQ        ENLPLSVGSP GKIRKRGLDSTFP
Sbjct: 108 FGVAGQILGGCSSNYRNGGTTNTTQTSQENLPLTGEENLPLSVGSPNGKIRKRGLDSTFP 167

Query: 62  FNSSK------------DCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDP 121
           FNS+K            D SST+EEKNAE EQNLGGNSRGKSTGKQ TKEKSNNS ++ P
Sbjct: 168 FNSNKKSDMKLKKDVSGDSSSTQEEKNAETEQNLGGNSRGKSTGKQ-TKEKSNNSAEA-P 227

Query: 122 KESYIHVRARRGQLATNSHSLAERV 127
           KE+YIHVRARRGQ ATNSHSLAERV
Sbjct: 228 KENYIHVRARRGQ-ATNSHSLAERV 249

[Close]

BLAST of CSPI07G15310 vs. NCBI nr
Match: XP_004141299.3 (transcription factor bHLH74 [Cucumis sativus] >KAE8649897.1 hypothetical protein Csa_012949 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 2.6e-43
Identity = 110/145 (75.86%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 2   FGVAGQILGGCSSNYKHGGTTNTTQTSQEN--------LPLSVGSPTGKIRKRGLDSTFP 61
           FGVAGQILGGCSSNY++GGTTNTTQTSQEN        LPLSVGSP GKIRKRGLDSTFP
Sbjct: 108 FGVAGQILGGCSSNYRNGGTTNTTQTSQENLPLAGEEILPLSVGSPNGKIRKRGLDSTFP 167

Query: 62  FNSSK------------DCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDP 121
           F+S+K            D SST+EEKNAEMEQNLGGNSRGKSTGKQ TKEKS+NS ++ P
Sbjct: 168 FSSNKKSDMKLKKDVSGDSSSTQEEKNAEMEQNLGGNSRGKSTGKQ-TKEKSSNSAEA-P 227

Query: 122 KESYIHVRARRGQLATNSHSLAERV 127
           KE+YIHVRARRGQ ATNSHSLAERV
Sbjct: 228 KENYIHVRARRGQ-ATNSHSLAERV 249

[Close]

BLAST of CSPI07G15310 vs. NCBI nr
Match: XP_038896915.1 (transcription factor bHLH74 [Benincasa hispida])

HSP 1 Score: 162.2 bits (409), Expect = 3.1e-36
Identity = 102/144 (70.83%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 2   FGVAGQILGGCSSNYKHGGT-TNTTQTSQENLPLS-----VG-SPTGKIRKRGLDSTFPF 61
           FG+AGQILGGCSSNY++G T  NT QTSQENLPLS     VG SP GKIRKR LDST PF
Sbjct: 108 FGLAGQILGGCSSNYRNGETNNNTAQTSQENLPLSGEETAVGSSPNGKIRKRALDSTLPF 167

Query: 62  NSSK------------DCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDPK 121
           + +K            D SST+EEKN EMEQNLGGNSRGK+TGKQ TKEKSNNS ++ PK
Sbjct: 168 SPNKKSDMKLKKDVSGDSSSTQEEKNVEMEQNLGGNSRGKATGKQ-TKEKSNNSAEA-PK 227

Query: 122 ESYIHVRARRGQLATNSHSLAERV 127
           E+YIHVRARRGQ ATNSHSLAERV
Sbjct: 228 ENYIHVRARRGQ-ATNSHSLAERV 248

[Close]

BLAST of CSPI07G15310 vs. NCBI nr
Match: XP_022139346.1 (transcription factor bHLH74 [Momordica charantia])

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-35
Identity = 98/142 (69.01%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 2   FGVAGQILGGCSSNYKHGGTTNTTQTSQENLPLS-----VGSPTGKIRKRGLDSTFPFNS 61
           FG++GQILG C SNY++GGTTNT QT QENLPLS      GSP+GK RKR LDSTFPF+ 
Sbjct: 124 FGLSGQILGACPSNYRNGGTTNTAQT-QENLPLSGEDAAGGSPSGKTRKRALDSTFPFSP 183

Query: 62  SK------------DCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSVDSDPKES 121
           +K            D SST+EEKNAEMEQNLGGN RGK+TGKQ TK+KSNNS ++ PKE+
Sbjct: 184 NKKSEGKLKKDVSGDSSSTQEEKNAEMEQNLGGNFRGKATGKQ-TKDKSNNSGEA-PKEN 243

Query: 122 YIHVRARRGQLATNSHSLAERV 127
           YIHVRARRGQ ATNSHSLAERV
Sbjct: 244 YIHVRARRGQ-ATNSHSLAERV 261

[Close]

BLAST of CSPI07G15310 vs. TAIR 10
Match: AT5G48560.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 28  SQENLPLSVGSPTGKIRKRGLDSTFPFNSSKDCSSTEEEKNAEMEQNLGGNSRGKSTGKQ 87
           S+EN P+S  SP+    K     T   N  K  S + EEK  +  +    +   +  G+ 
Sbjct: 230 SKEN-PISTASPSPSFSK-----TAEKNGGKGGSKSSEEKGGKRRREEEDDEEEEGEGE- 289

Query: 88  TTKEKSNNSVDSDPKESYIHVRARRGQLATNSHSLAERV 127
               KSNN+   +P + YIHVRARRGQ AT+SHSLAERV
Sbjct: 290 --GNKSNNTKPPEPPKDYIHVRARRGQ-ATDSHSLAERV 318

[Close]

BLAST of CSPI07G15310 vs. TAIR 10
Match: AT1G68920.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06
Identity = 46/114 (40.35%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 19  GGTTNTTQTSQEN--LPLSVGSPTGKIRKRGLDSTFPFNSSKDCSSTEEEKNAEMEQN-- 78
           G  +  TQ+S  N        S T K ++ G +S    +     S  E + N + ++N  
Sbjct: 212 GNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQNSEAAQSHRSQQSEEEPDNNGDEKRNDE 271

Query: 79  LGGNSRGK--STGKQTTKEKSNNSVDSDPKESYIHVRARRGQLATNSHSLAERV 127
              NS GK  ++GKQ  K+ S+      PK+ YIHVRARRGQ ATNSHSLAERV
Sbjct: 272 QSPNSPGKKSNSGKQQGKQSSD-----PPKDGYIHVRARRGQ-ATNSHSLAERV 319

[Close]

BLAST of CSPI07G15310 vs. TAIR 10
Match: AT1G68920.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 4.6e-06
Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 19  GGTTNTTQTSQEN--LPLSVGSPTGKIRKRGLDSTFPFNSSKDCSSTEE-EKNAEMEQN- 78
           G  +  TQ+S  N        S T K ++ G  ++    S +   S EE + N + ++N 
Sbjct: 212 GNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRND 271

Query: 79  -LGGNSRGK--STGKQTTKEKSNNSVDSDPKESYIHVRARRGQLATNSHSLAERV 127
               NS GK  ++GKQ  K+ S+      PK+ YIHVRARRGQ ATNSHSLAERV
Sbjct: 272 EQSPNSPGKKSNSGKQQGKQSSD-----PPKDGYIHVRARRGQ-ATNSHSLAERV 320

[Close]

BLAST of CSPI07G15310 vs. TAIR 10
Match: AT1G68920.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 4.6e-06
Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 19  GGTTNTTQTSQEN--LPLSVGSPTGKIRKRGLDSTFPFNSSKDCSSTEE-EKNAEMEQN- 78
           G  +  TQ+S  N        S T K ++ G  ++    S +   S EE + N + ++N 
Sbjct: 212 GNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRND 271

Query: 79  -LGGNSRGK--STGKQTTKEKSNNSVDSDPKESYIHVRARRGQLATNSHSLAERV 127
               NS GK  ++GKQ  K+ S+      PK+ YIHVRARRGQ ATNSHSLAERV
Sbjct: 272 EQSPNSPGKKSNSGKQQGKQSSD-----PPKDGYIHVRARRGQ-ATNSHSLAERV 320

[Close]

BLAST of CSPI07G15310 vs. TAIR 10
Match: AT1G10120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 3.9e-05
Identity = 35/89 (39.33%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 38  SPTGKIRKRGLDSTFPFNSSKDCSSTEEEKNAEMEQNLGGNSRGKSTGKQTTKEKSNNSV 97
           SP GK R    +S +      +  + EE +      N     + K+   + T  K ++  
Sbjct: 142 SPVGKRRLPEAESQW------NKKAVEEFQEDPQRGNDQSQKKHKNDQSKETVNKESSQS 201

Query: 98  DSDPKESYIHVRARRGQLATNSHSLAERV 127
           +  PKE+YIH+RARRGQ ATNSHSLAERV
Sbjct: 202 EEAPKENYIHMRARRGQ-ATNSHSLAERV 223

The following BLAST results are available for this feature:

BLAST of CSPI07G15310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJL4	1.7e-05	41.41	Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1	[more]
Q9CAA9	6.5e-05	40.87	Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1	[more]
Q6NKN9	5.5e-04	39.33	Transcription factor bHLH74 OS=Arabidopsis thaliana OX=3702 GN=BHLH74 PE=1 SV=1	[more]
Q9C670	7.2e-04	40.70	Transcription factor bHLH76 OS=Arabidopsis thaliana OX=3702 GN=BHLH76 PE=1 SV=1	[more]

BLAST of CSPI07G15310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFJ6	8.7e-45	77.24	Transcription factor bHLH74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BV77	8.7e-45	77.24	transcription factor bHLH74-like OS=Cucumis melo OX=3656 GN=LOC103493626 PE=4 SV...	[more]
A0A5D3D971	4.3e-44	76.55	Transcription factor bHLH74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0L0K5	2.1e-43	75.17	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G645240 PE=4 S...	[more]
A0A6J1CCD8	5.7e-36	69.01	transcription factor bHLH74 OS=Momordica charantia OX=3673 GN=LOC111010288 PE=4 ...	[more]

BLAST of CSPI07G15310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452681.1	1.8e-44	77.24	PREDICTED: transcription factor bHLH74-like [Cucumis melo] >KAA0064471.1 transcr...	[more]
TYK20117.1	8.9e-44	76.55	transcription factor bHLH74-like [Cucumis melo var. makuwa]	[more]
XP_004141299.3	2.6e-43	75.86	transcription factor bHLH74 [Cucumis sativus] >KAE8649897.1 hypothetical protein...	[more]
XP_038896915.1	3.1e-36	70.83	transcription factor bHLH74 [Benincasa hispida]	[more]
XP_022139346.1	1.2e-35	69.01	transcription factor bHLH74 [Momordica charantia]	[more]

BLAST of CSPI07G15310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48560.1	1.2e-06	41.41	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.3	2.1e-06	40.35	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.1	4.6e-06	40.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.2	4.6e-06	40.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10120.1	3.9e-05	39.33	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..36
None	No IPR available	PANTHER	PTHR12565:SF405	TRANSCRIPTION FACTOR BHLH49	coord: 21..126
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 21..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G15310.1	CSPI07G15310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity