CSPI07G13910 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G13910
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	NBS-LRR type resistance protein
Location	Chr7: 12421630 .. 12421959 (+)
RNA-Seq Expression	CSPI07G13910
Synteny	CSPI07G13910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGAAAGCAAGATCTTACCAAAGCCCTTAAGAAATACCAAGCCACTGTTGGCAAAGCAAGCCCATTCAGTGATGGAGTTGAGCATTCTCCATTTGGCAGTCTTGTGCTGGAGCAAAGAAAAGAAGAAATACAACTTAAAATGGTGGTCATCAATGGAGTAAAAATCCAACTTCTTGAGGATAAGTTGGGCGACCTACTCGCCATAGTCTCTAGAGAGACTTCCAAAAGAGAAAAAGAGCAGAAGGAACAAGAAGAGCGAGAAATGTTAGAAAAAGAAGGAATGGGAAAGGAGAGGGTTGAGGAAGAGCAAAAAGAAAGAGAATAA

mRNA sequence

ATGTTTGGAAAGCAAGATCTTACCAAAGCCCTTAAGAAATACCAAGCCACTGTTGGCAAAGCAAGCCCATTCAGTGATGGAGTTGAGCATTCTCCATTTGGCAGTCTTGTGCTGGAGCAAAGAAAAGAAGAAATACAACTTAAAATGGTGGTCATCAATGGAGTAAAAATCCAACTTCTTGAGGATAAGTTGGGCGACCTACTCGCCATAGTCTCTAGAGAGACTTCCAAAAGAGAAAAAGAGCAGAAGGAACAAGAAGAGCGAGAAATGTTAGAAAAAGAAGGAATGGGAAAGGAGAGGGTTGAGGAAGAGCAAAAAGAAAGAGAATAA

Coding sequence (CDS)

ATGTTTGGAAAGCAAGATCTTACCAAAGCCCTTAAGAAATACCAAGCCACTGTTGGCAAAGCAAGCCCATTCAGTGATGGAGTTGAGCATTCTCCATTTGGCAGTCTTGTGCTGGAGCAAAGAAAAGAAGAAATACAACTTAAAATGGTGGTCATCAATGGAGTAAAAATCCAACTTCTTGAGGATAAGTTGGGCGACCTACTCGCCATAGTCTCTAGAGAGACTTCCAAAAGAGAAAAAGAGCAGAAGGAACAAGAAGAGCGAGAAATGTTAGAAAAAGAAGGAATGGGAAAGGAGAGGGTTGAGGAAGAGCAAAAAGAAAGAGAATAA

Protein sequence

MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLLEDKLGDLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE*

Homology

[Close]

BLAST of CSPI07G13910 vs. ExPASy TrEMBL
Match: A0A0A0K8A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336460 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.8e-46
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60
           MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL
Sbjct: 1   MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60

Query: 61  EDKLGDLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 110
           EDKLG+LLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE
Sbjct: 61  EDKLGNLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 109

[Close]

BLAST of CSPI07G13910 vs. ExPASy TrEMBL
Match: A0A5D3BZ15 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00270 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.5e-21
Identity = 67/109 (61.47%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 1   MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60
           M+GKQ LT+AL KYQ  + K SP+++GVE + F  L+ EQ +EE  LKMVVIN V IQLL
Sbjct: 1   MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60

Query: 61  EDKLGDLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 110
           EDK GDLLAI+  ET KRE+EQK+QEERE L+KE + KER  +E K+RE
Sbjct: 61  EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKRE 109

[Close]

BLAST of CSPI07G13910 vs. ExPASy TrEMBL
Match: A0A5A7SUZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00150 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.9e-20
Identity = 71/109 (65.14%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 1   MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60
           MFGKQ    ALKKYQ TVGKAS  ++G E +P   LV EQRKE+  LKMV+INGV+IQL 
Sbjct: 1   MFGKQ----ALKKYQGTVGKASLSNEGAEKTPSDGLVSEQRKEKRPLKMVIINGVEIQLT 60

Query: 61  EDKLGDLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 110
           EDKLGDLLAI+  ETSKRE EQK QE    LEKE + KE  E+EQ+ERE
Sbjct: 61  EDKLGDLLAIIFGETSKREDEQKVQER---LEKEKVEKEEAEKEQRERE 102

[Close]

BLAST of CSPI07G13910 vs. ExPASy TrEMBL
Match: A0A5D3BW29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00040 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.6e-15
Identity = 50/73 (68.49%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 1  MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60
          MFG+Q L +ALKKYQAT+G+ASP +  +EHSP    +LE +K EIQLK VVINGVKIQL 
Sbjct: 1  MFGEQSLIEALKKYQATLGEASPSNKVIEHSPVDGPMLE-KKGEIQLKTVVINGVKIQLP 60

Query: 61 EDKLGDLLAIVSR 74
          +DKLGDLL IVSR
Sbjct: 61 KDKLGDLLTIVSR 72

[Close]

BLAST of CSPI07G13910 vs. ExPASy TrEMBL
Match: A0A5D3C865 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001870 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.9e-14
Identity = 57/101 (56.44%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 9   KALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLLEDKLGDLL 68
           +ALKKYQAT+GKASP ++ VEHSP    VLE+ KE+I LK+V IN VKIQL EDKL DLL
Sbjct: 21  QALKKYQATLGKASPSNEAVEHSPASGPVLEE-KEKIPLKIVFINRVKIQLPEDKLQDLL 80

Query: 69  AIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 110
           AIVS ETS++E++++E+E+ E  ++E   K+   +++K RE
Sbjct: 81  AIVSGETSRKEEDREEKEKEEKNKEEHEEKKEEAKKKKNRE 120

[Close]

BLAST of CSPI07G13910 vs. NCBI nr
Match: KGN44567.1 (hypothetical protein Csa_016483 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 1.8e-45
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60
           MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL
Sbjct: 1   MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60

Query: 61  EDKLGDLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 110
           EDKLG+LLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE
Sbjct: 61  EDKLGNLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 109

[Close]

BLAST of CSPI07G13910 vs. NCBI nr
Match: TYK04360.1 (hypothetical protein E5676_scaffold675G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 112.1 bits (279), Expect = 3.1e-21
Identity = 67/109 (61.47%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 1   MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60
           M+GKQ LT+AL KYQ  + K SP+++GVE + F  L+ EQ +EE  LKMVVIN V IQLL
Sbjct: 1   MYGKQPLTEALMKYQEIIAKTSPYNEGVEKTSFDGLMPEQGREERPLKMVVINEVAIQLL 60

Query: 61  EDKLGDLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 110
           EDK GDLLAI+  ET KRE+EQK+QEERE L+KE + KER  +E K+RE
Sbjct: 61  EDKSGDLLAIIFGETLKREEEQKDQEERERLDKEKVEKERANKESKKRE 109

[Close]

BLAST of CSPI07G13910 vs. NCBI nr
Match: KAA0033147.1 (hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa] >TYK17087.1 hypothetical protein E5676_scaffold1032G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-19
Identity = 71/109 (65.14%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 1   MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60
           MFGKQ    ALKKYQ TVGKAS  ++G E +P   LV EQRKE+  LKMV+INGV+IQL 
Sbjct: 1   MFGKQ----ALKKYQGTVGKASLSNEGAEKTPSDGLVSEQRKEKRPLKMVIINGVEIQLT 60

Query: 61  EDKLGDLLAIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 110
           EDKLGDLLAI+  ETSKRE EQK QE    LEKE + KE  E+EQ+ERE
Sbjct: 61  EDKLGDLLAIIFGETSKREDEQKVQER---LEKEKVEKEEAEKEQRERE 102

[Close]

BLAST of CSPI07G13910 vs. NCBI nr
Match: KAA0034977.1 (hypothetical protein E6C27_scaffold57G00110 [Cucumis melo var. makuwa] >TYK02319.1 hypothetical protein E5676_scaffold155G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-15
Identity = 50/73 (68.49%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 1  MFGKQDLTKALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLL 60
          MFG+Q L +ALKKYQAT+G+ASP +  +EHSP    +LE +K EIQLK VVINGVKIQL 
Sbjct: 1  MFGEQSLIEALKKYQATLGEASPSNKVIEHSPVDGPMLE-KKGEIQLKTVVINGVKIQLP 60

Query: 61 EDKLGDLLAIVSR 74
          +DKLGDLL IVSR
Sbjct: 61 KDKLGDLLTIVSR 72

[Close]

BLAST of CSPI07G13910 vs. NCBI nr
Match: KAA0048215.1 (hypothetical protein E6C27_scaffold63G001290 [Cucumis melo var. makuwa] >TYK08041.1 hypothetical protein E5676_scaffold265G001870 [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-13
Identity = 57/101 (56.44%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 9   KALKKYQATVGKASPFSDGVEHSPFGSLVLEQRKEEIQLKMVVINGVKIQLLEDKLGDLL 68
           +ALKKYQAT+GKASP ++ VEHSP    VLE+ KE+I LK+V IN VKIQL EDKL DLL
Sbjct: 21  QALKKYQATLGKASPSNEAVEHSPASGPVLEE-KEKIPLKIVFINRVKIQLPEDKLQDLL 80

Query: 69  AIVSRETSKREKEQKEQEEREMLEKEGMGKERVEEEQKERE 110
           AIVS ETS++E++++E+E+ E  ++E   K+   +++K RE
Sbjct: 81  AIVSGETSRKEEDREEKEKEEKNKEEHEEKKEEAKKKKNRE 120

The following BLAST results are available for this feature:

BLAST of CSPI07G13910 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G13910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8A0	8.8e-46	99.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336460 PE=4 SV=1	[more]
A0A5D3BZ15	1.5e-21	61.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SUZ4	4.9e-20	65.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BW29	3.6e-15	68.49	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C865	8.9e-14	56.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CSPI07G13910 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44567.1	1.8e-45	99.08	hypothetical protein Csa_016483 [Cucumis sativus]	[more]
TYK04360.1	3.1e-21	61.47	hypothetical protein E5676_scaffold675G00270 [Cucumis melo var. makuwa]	[more]
KAA0033147.1	1.0e-19	65.14	hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa] >TYK170...	[more]
KAA0034977.1	7.4e-15	68.49	hypothetical protein E6C27_scaffold57G00110 [Cucumis melo var. makuwa] >TYK02319...	[more]
KAA0048215.1	1.8e-13	56.44	hypothetical protein E6C27_scaffold63G001290 [Cucumis melo var. makuwa] >TYK0804...	[more]

BLAST of CSPI07G13910 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G13910.1	CSPI07G13910.1	mRNA