CSPI07G13650 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G13650
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNACHT, LRR and PYD domains-containing protein 5 isoform X3
LocationChr7: 12175705 .. 12176139 (+)
RNA-Seq ExpressionCSPI07G13650
SyntenyCSPI07G13650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAGCCCAAAATCGACAACAACGATATCGCACAGTGAGAGGAACTCCCGGTGACGTCTCCCTCCGGTCATTATATACAATCTTGCAGCTCTCACTGACCACTAAACCATTTCAATTCCCAACTTCATTGTTTCTCATTCCAGTTTTCATGGCGGAAGCTCCTTCGCTTCTCTCTCTATGCATCGCCCTAGTCAGAGACGAGATTCTTCAAAGTAATCATCTCCATACTTCTTCTATATCTTATACTCCATTCCTACTCCCGATTCGTTTCTCTGCCCTGTTTTCTTAATTCGTTGTTCTTTTTTACTTTCAGGGGATGACGTTCCACCGGCTCTCTATGACCTTCCTCCTCACTTGTTGGATACCCTGGCATTGCGGCTGCCGCCCTTGGCTTTACGCAATTTACAATCTGGAATGTACGTTTTCCCTCCCTAA

mRNA sequence

TTGAGCCCAAAATCGACAACAACGATATCGCACAGTGAGAGGAACTCCCGGTGACGTCTCCCTCCGGTCATTATATACAATCTTGCAGCTCTCACTGACCACTAAACCATTTCAATTCCCAACTTCATTGTTTCTCATTCCAGTTTTCATGGCGGAAGCTCCTTCGCTTCTCTCTCTATGCATCGCCCTAGTCAGAGACGAGATTCTTCAAAGGGATGACGTTCCACCGGCTCTCTATGACCTTCCTCCTCACTTGTTGGATACCCTGGCATTGCGGCTGCCGCCCTTGGCTTTACGCAATTTACAATCTGGAATGTACGTTTTCCCTCCCTAA

Coding sequence (CDS)

ATGGCGGAAGCTCCTTCGCTTCTCTCTCTATGCATCGCCCTAGTCAGAGACGAGATTCTTCAAAGGGATGACGTTCCACCGGCTCTCTATGACCTTCCTCCTCACTTGTTGGATACCCTGGCATTGCGGCTGCCGCCCTTGGCTTTACGCAATTTACAATCTGGAATGTACGTTTTCCCTCCCTAA

Protein sequence

MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGMYVFPP*
Homology
[Close]
BLAST of CSPI07G13650 vs. ExPASy TrEMBL
Match: A0A0A0K6N3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G330380 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-25
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGMYVFP 60
          MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGMYVFP
Sbjct: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGMYVFP 60

Query: 61 P 62
          P
Sbjct: 61 P 61

[Close]
BLAST of CSPI07G13650 vs. ExPASy TrEMBL
Match: A0A5D3C7E3 (NACHT, LRR and PYD domains-containing protein 5 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00940 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.2e-21
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGMYVFP 60
          MAEAPSLLSLCIAL+ DEI+QRDDVPP+LYDLPP LLDTLAL+LPPLAL NLQSGMYV P
Sbjct: 1  MAEAPSLLSLCIALITDEIVQRDDVPPSLYDLPPDLLDTLALQLPPLALHNLQSGMYVLP 60

Query: 61 P 62
          P
Sbjct: 61 P 61

[Close]
BLAST of CSPI07G13650 vs. ExPASy TrEMBL
Match: A0A1S3CFT7 (uncharacterized protein LOC103500467 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500467 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.8e-19
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM 57
          MAEAPSLLSLCIALV DEI+QRDDVPPALYDLPP LLDTLAL+LPPLAL NLQSGM
Sbjct: 1  MAEAPSLLSLCIALVTDEIVQRDDVPPALYDLPPDLLDTLALQLPPLALHNLQSGM 56

[Close]
BLAST of CSPI07G13650 vs. ExPASy TrEMBL
Match: A0A1S3CFV1 (uncharacterized protein LOC103500467 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500467 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.8e-19
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM 57
          MAEAPSLLSLCIALV DEI+QRDDVPPALYDLPP LLDTLAL+LPPLAL NLQSGM
Sbjct: 1  MAEAPSLLSLCIALVTDEIVQRDDVPPALYDLPPDLLDTLALQLPPLALHNLQSGM 56

[Close]
BLAST of CSPI07G13650 vs. ExPASy TrEMBL
Match: A0A1S3CFY9 (uncharacterized protein LOC103500467 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500467 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.8e-19
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM 57
          MAEAPSLLSLCIALV DEI+QRDDVPPALYDLPP LLDTLAL+LPPLAL NLQSGM
Sbjct: 1  MAEAPSLLSLCIALVTDEIVQRDDVPPALYDLPPDLLDTLALQLPPLALHNLQSGM 56

[Close]
BLAST of CSPI07G13650 vs. NCBI nr
Match: XP_004139728.1 (protein NLRC3 isoform X2 [Cucumis sativus] >KGN44867.2 hypothetical protein Csa_016637 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM 57
          MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM
Sbjct: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM 56

[Close]
BLAST of CSPI07G13650 vs. NCBI nr
Match: XP_031744906.1 (NACHT, LRR and PYD domains-containing protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM 57
          MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM
Sbjct: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM 56

[Close]
BLAST of CSPI07G13650 vs. NCBI nr
Match: KAA0050632.1 (NACHT, LRR and PYD domains-containing protein 5 isoform X3 [Cucumis melo var. makuwa] >TYK07801.1 NACHT, LRR and PYD domains-containing protein 5 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 6.7e-21
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGMYVFP 60
          MAEAPSLLSLCIAL+ DEI+QRDDVPP+LYDLPP LLDTLAL+LPPLAL NLQSGMYV P
Sbjct: 1  MAEAPSLLSLCIALITDEIVQRDDVPPSLYDLPPDLLDTLALQLPPLALHNLQSGMYVLP 60

Query: 61 P 62
          P
Sbjct: 61 P 61

[Close]
BLAST of CSPI07G13650 vs. NCBI nr
Match: XP_008461991.1 (PREDICTED: uncharacterized protein LOC103500467 isoform X2 [Cucumis melo])

HSP 1 Score: 102.1 bits (253), Expect = 1.8e-18
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM 57
          MAEAPSLLSLCIALV DEI+QRDDVPPALYDLPP LLDTLAL+LPPLAL NLQSGM
Sbjct: 1  MAEAPSLLSLCIALVTDEIVQRDDVPPALYDLPPDLLDTLALQLPPLALHNLQSGM 56

[Close]
BLAST of CSPI07G13650 vs. NCBI nr
Match: XP_008461992.1 (PREDICTED: uncharacterized protein LOC103500467 isoform X3 [Cucumis melo])

HSP 1 Score: 102.1 bits (253), Expect = 1.8e-18
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM 57
          MAEAPSLLSLCIALV DEI+QRDDVPPALYDLPP LLDTLAL+LPPLAL NLQSGM
Sbjct: 1  MAEAPSLLSLCIALVTDEIVQRDDVPPALYDLPPDLLDTLALQLPPLALHNLQSGM 56

[Close]
BLAST of CSPI07G13650 vs. TAIR 10
Match: AT2G20210.1 (RNI-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 4.5e-07
Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 0 

Query: 1  MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGM 57
          M +APSL  LCI  ++ ++L+ D+  P LY+LP  LLD +   LP LAL+  Q+ M
Sbjct: 1  MTKAPSLAFLCIQSLKIQLLESDNPIPDLYELPSELLDGIVAHLPALALQKFQTNM 56

The following BLAST results are available for this feature:
BLAST of CSPI07G13650 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G13650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6N31.7e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G330380 PE=4 SV=1[more]
A0A5D3C7E33.2e-2186.89NACHT, LRR and PYD domains-containing protein 5 isoform X3 OS=Cucumis melo var. ... [more]
A0A1S3CFT78.8e-1991.07uncharacterized protein LOC103500467 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CFV18.8e-1991.07uncharacterized protein LOC103500467 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CFY98.8e-1991.07uncharacterized protein LOC103500467 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of CSPI07G13650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139728.11.3e-21100.00protein NLRC3 isoform X2 [Cucumis sativus] >KGN44867.2 hypothetical protein Csa_... [more]
XP_031744906.11.3e-21100.00NACHT, LRR and PYD domains-containing protein 5 isoform X1 [Cucumis sativus][more]
KAA0050632.16.7e-2186.89NACHT, LRR and PYD domains-containing protein 5 isoform X3 [Cucumis melo var. ma... [more]
XP_008461991.11.8e-1891.07PREDICTED: uncharacterized protein LOC103500467 isoform X2 [Cucumis melo][more]
XP_008461992.11.8e-1891.07PREDICTED: uncharacterized protein LOC103500467 isoform X3 [Cucumis melo][more]
BLAST of CSPI07G13650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G20210.14.5e-0744.64RNI-like superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G13650.1CSPI07G13650.1mRNA