CSPI07G13310 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G13310
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 11752010 .. 11752243 (-)
RNA-Seq ExpressionCSPI07G13310
SyntenyCSPI07G13310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGAGTCTCAGTCGCGTTGCCCTCCTCCGTCTGATTCTCCTTCGTTTGCCGACCGTCTATTTTCGTATGGAAGCTCACGACATCGACCGTTCCTGCCTTTGCAGCCACATGTAGGCTACGTAGCCTCCCTTCACACAGCGCCATCGACCATCGTCGCGTTTTACGGTCAAGGATGCAAATTGAGTCGGTCTTCTTTTCGTGAGCCACGCGTCCAAGCCGTGTTAGTCTGA

mRNA sequence

ATGTGTGAGTCTCAGTCGCGTTGCCCTCCTCCGTCTGATTCTCCTTCGTTTGCCGACCGTCTATTTTCGTATGGAAGCTCACGACATCGACCGTTCCTGCCTTTGCAGCCACATGTAGGCTACGTAGCCTCCCTTCACACAGCGCCATCGACCATCGTCGCGTTTTACGGTCAAGGATGCAAATTGAGTCGGTCTTCTTTTCGTGAGCCACGCGTCCAAGCCGTGTTAGTCTGA

Coding sequence (CDS)

ATGTGTGAGTCTCAGTCGCGTTGCCCTCCTCCGTCTGATTCTCCTTCGTTTGCCGACCGTCTATTTTCGTATGGAAGCTCACGACATCGACCGTTCCTGCCTTTGCAGCCACATGTAGGCTACGTAGCCTCCCTTCACACAGCGCCATCGACCATCGTCGCGTTTTACGGTCAAGGATGCAAATTGAGTCGGTCTTCTTTTCGTGAGCCACGCGTCCAAGCCGTGTTAGTCTGA

Protein sequence

MCESQSRCPPPSDSPSFADRLFSYGSSRHRPFLPLQPHVGYVASLHTAPSTIVAFYGQGCKLSRSSFREPRVQAVLV*
Homology
[Close]
BLAST of CSPI07G13310 vs. NCBI nr
Match: KAE8646210.1 (hypothetical protein Csa_015967, partial [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 5.8e-30
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0 

Query: 9  PPPSDSPSFADRLFSYGSSRHRPFLPLQPHVGYVASLHTAPSTIVAFYGQGCKLSRSSFR 68
          PPPSDSPSFADRLFSYGSSRHRPF PLQPHVGYVASLHTAPSTIVAFYGQGCK SRSSFR
Sbjct: 6  PPPSDSPSFADRLFSYGSSRHRPFPPLQPHVGYVASLHTAPSTIVAFYGQGCKSSRSSFR 65

Query: 69 EPRVQAVLV 78
          EPRVQAVLV
Sbjct: 66 EPRVQAVLV 74

The following BLAST results are available for this feature:
BLAST of CSPI07G13310 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G13310 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G13310 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646210.15.8e-3097.10hypothetical protein Csa_015967, partial [Cucumis sativus][more]
BLAST of CSPI07G13310 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G13310.1CSPI07G13310.1mRNA