CSPI07G12010 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G12010
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr7: 10259282 .. 10260342 (+)
RNA-Seq Expression	CSPI07G12010
Synteny	CSPI07G12010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTCTGGCCTGAAGTGTCTTGATTCTGCTACATTCTATAGGTGATTGTAATCTGGCTTCGACCAAGAGTCGAGAGGTCCCCACATAGTTTCTAATACAAAAGAACCTGACGCATTCTAGCATGAATCAGCATCGCTCTCCTTCCTTCTAAGGGCGATTATAATGTGGCTTCAGCCAAGAGATGAGAGTTCCCCACGCAGTTTCTGATACCAAAGAAATTCAACGGATCCTGCCCAAAGCGACTTCACTCGCTTGCGTTCTACAAACGACTATGGCTTTGAGCGAGAGTCGAGAGTTCCCTATGCAAATTCTGATATCGATGGAACCTGATTCATTCTAACTCGAAGCGGTTTGGCTCTTCTACTTTCTACGATTGAATGTATTGTGGCTCCAGTCGAGAGTCAAGAGTTCCCCGCGCAGGCTCTCACACTTAAGGAACCCAACGCATTTTTTCTCCGAAGTGGCTTGGCTCTCTTACTTTCTTCGGGCGATGGTCATGAGGCTTGGGCTAAGAGTCGAGAGTTCCCCATGCAAATTCTAATATTTGGAACCTTATGCATTCTAGCCCGAAGCAGCTTGGCTCGCCTACGTTCTACGGGCAATGGTCATGTGGCTTGGGCCAAGACTCGAGAGTTCCCAAGCAATTTCTAATAACAAAGGAACCCGACCCATTCTAGTTGAAATGGCTTGACACTCGTACTCCCTTCGAACGATTATTATATGGTTTTGGACAATAGTTAAGAGTTCCCCACGCAATTTCAAATAACGAAGGAATCCGACACATTCTAGCTCGAAACGACTTGATTCTCCTACTTTCTATAGGCGATTATGGCTTCAAGCGAGAGTCGAGAGTTCCTTACGTGGGTTCTGATATCGATGCAACCCACTTCATTCTAGTCAAAAGCAACTTGGCTCTCCTACTTTCTACGAGTGATTGTATTGAGGCTTCAATTTTGAGTCGAGAGTTCCCAAAGCGGATTCTGATACCTAAGGAACTTGACTCATTCTGGCCTGAAATGGCTTGGCTCTCCTACTTTCTACGTGTGATTGTAATGTAG

mRNA sequence

ATGCATTCTGGCCTGAAGTGTCTTGATTCTGCTACATTCTATAGCCAAGAGATGAGAGTTCCCCACGCAGTTTCTGATACCAAAGAAATTCAACGGATCCTGCCCAAAGCGACTTCACTCGCTTGCGTTCTACAAACGACTATGGCTTTGAGCGAGATCGAGAGTCAAGAGTTCCCCGCGCAGGCTCTCACACTTAAGGAACCCAACGCATTTTTTCTCCGAAGTGGCTTGGCTCTCTTACTTTCTTCGGGCGATGGTCATGAGGCTTGGGCTAAGAGTCGAGAGTTCCCCATGCAAATTCTAATATTTGGAACCTTATGCATTCTAGCCCGAAGCAGCTTGGCTCGCCTACGTTCTACGGGCAATGGTCATTTAAGAGTTCCCCACGCAATTTCAAATAACGAAGGAATCCGACACATTCTAGCTCGAAACGACTTGATTCTCCTACTTTCTATAGGCGATTATGGCTTCAAGCGAGAGTCGAGAGTTCCTTACGTGGGTTCTGATATCGATGCAACCCACTTCATTCTAGTCAAAAGCAACTTGGCTCTCCTACTTTCTACGAGTGATTGTATTGAGGCTTCAATTTTGAGTCGAGAGTTCCCAAAGCGGATTCTGATACCTAAGGAACTTGACTCATTCTGGCCTGAAATGGCTTGGCTCTCCTACTTTCTACGTGTGATTGTAATGTAG

Coding sequence (CDS)

ATGCATTCTGGCCTGAAGTGTCTTGATTCTGCTACATTCTATAGCCAAGAGATGAGAGTTCCCCACGCAGTTTCTGATACCAAAGAAATTCAACGGATCCTGCCCAAAGCGACTTCACTCGCTTGCGTTCTACAAACGACTATGGCTTTGAGCGAGATCGAGAGTCAAGAGTTCCCCGCGCAGGCTCTCACACTTAAGGAACCCAACGCATTTTTTCTCCGAAGTGGCTTGGCTCTCTTACTTTCTTCGGGCGATGGTCATGAGGCTTGGGCTAAGAGTCGAGAGTTCCCCATGCAAATTCTAATATTTGGAACCTTATGCATTCTAGCCCGAAGCAGCTTGGCTCGCCTACGTTCTACGGGCAATGGTCATTTAAGAGTTCCCCACGCAATTTCAAATAACGAAGGAATCCGACACATTCTAGCTCGAAACGACTTGATTCTCCTACTTTCTATAGGCGATTATGGCTTCAAGCGAGAGTCGAGAGTTCCTTACGTGGGTTCTGATATCGATGCAACCCACTTCATTCTAGTCAAAAGCAACTTGGCTCTCCTACTTTCTACGAGTGATTGTATTGAGGCTTCAATTTTGAGTCGAGAGTTCCCAAAGCGGATTCTGATACCTAAGGAACTTGACTCATTCTGGCCTGAAATGGCTTGGCTCTCCTACTTTCTACGTGTGATTGTAATGTAG

Protein sequence

MHSGLKCLDSATFYSQEMRVPHAVSDTKEIQRILPKATSLACVLQTTMALSEIESQEFPAQALTLKEPNAFFLRSGLALLLSSGDGHEAWAKSREFPMQILIFGTLCILARSSLARLRSTGNGHLRVPHAISNNEGIRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDATHFILVKSNLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVIVM*

Homology

[Close]

BLAST of CSPI07G12010 vs. ExPASy TrEMBL
Match: A0A0A0K7T2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279790 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.6e-124
Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MHSGLKCLDSATFYSQEMRVPHAVSDTKEIQRILPKATSLACVLQTTMALSEIESQEFPA 60
           MHSGLKCLDSATFYSQEMRVPHAVSDTKEIQRILPKATSL+CVLQTTMALSEIESQEFPA
Sbjct: 1   MHSGLKCLDSATFYSQEMRVPHAVSDTKEIQRILPKATSLSCVLQTTMALSEIESQEFPA 60

Query: 61  QALTLKEPNAFFLRSGLALLLSSGDGHEAWAKSREFPMQILIFGTLCILARSSLARLRST 120
           QALTLKEPNAFFLRSGLALLLSSGDGHEAWAKSREFPMQILIFGTLCILARSSLARLRST
Sbjct: 61  QALTLKEPNAFFLRSGLALLLSSGDGHEAWAKSREFPMQILIFGTLCILARSSLARLRST 120

Query: 121 GNGHLRVPHAISNNEGIRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDATHFILVKS 180
           GNGHLRVPHAISNNEGIRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDATHFILVKS
Sbjct: 121 GNGHLRVPHAISNNEGIRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDATHFILVKS 180

Query: 181 NLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVIVM 231
           NLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVIVM
Sbjct: 181 NLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVIVM 230

[Close]

BLAST of CSPI07G12010 vs. ExPASy TrEMBL
Match: A0A0A0K4J2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279850 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.6e-27
Identity = 78/152 (51.32%), Postives = 93/152 (61.18%), Query Frame = 0


Query: 88  EAWAKSREFPMQILI------FGTLCILARSSLARLR---STGNGHLRVPHAISNNEGIR 147
           E++  S+EFP ++LI              R+ +  LR    +     RVPHAISN    +
Sbjct: 176 ESFLYSQEFPTKVLIPKEPDALWPNYFFLRAIVMWLRPRVESSPRKSRVPHAISNT---K 235

Query: 148 HILARNDLILLLSIGDYGFKRESRVPYVGSDIDATHFILVKSNLALLLSTSDCIEASILS 207
            I AR+ L LLLS GDYGF+RES VP  GS IDAT  IL  S  ALLLST DC  AS  S
Sbjct: 236 EIQARSGLDLLLSKGDYGFRRESEVPDAGSSIDATRCILAHSGFALLLSTGDCNVASTKS 295

Query: 208 REFPKRILIPKELDSFWPEMAWLSYFLRVIVM 231
           REFP ++LIPKE D+ WP+ AWLSYFLR I M
Sbjct: 296 REFPTKVLIPKEPDALWPKAAWLSYFLRAIFM 324

[Close]

BLAST of CSPI07G12010 vs. ExPASy TrEMBL
Match: A0A0A0K328 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G140940 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.3e-18
Identity = 67/150 (44.67%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 89  AWAKSREFPMQILIFGTLCILARSSLARLRSTGNGHL---RVPHAISNNEG--------- 148
           AWAKSRE PMQ LI      LA S LA L STG+ ++   +V  +  ++E          
Sbjct: 2   AWAKSRELPMQFLISKEPTHLAESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYPK 61

Query: 149 ------IRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDATHFILVKSNLALLLSTSD 208
                 +  ILAR+DL LLL  GDYGF RE RVPY   D + T  IL +S LALL+S  +
Sbjct: 62  RLGSLTLYRILARSDLALLLFTGDYGFGRELRVPYENFDNNGTRCILARSGLALLISRGE 121

Query: 209 CIEASILSREFPKRILIPKELDSFWPEMAW 221
            I AS+ SREF  + L  KE ++F  E+AW
Sbjct: 122 FIVASVESREFNTQDLTLKEPNTFLLEVAW 151

[Close]

BLAST of CSPI07G12010 vs. ExPASy TrEMBL
Match: A0A0A0K9A9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279830 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-13
Identity = 79/235 (33.62%), Postives = 101/235 (42.98%), Query Frame = 0


Query: 1   MHSGLKCLDSATFY-------SQEMRVPHAVSDTKEIQRILPKATSLACVLQTTMALSEI 60
           +HS  K L + TFY        QE RVPHA+ + +  Q IL                   
Sbjct: 36  IHSSPKRLGTPTFYERFLCGFGQESRVPHAIYNIEGTQSIL------------------- 95

Query: 61  ESQEFPAQALTLKEPNAFFLRSGLALLLSSGDGHEAWAKSREFPMQILIFGTLCILARSS 120
                               +SGLALLLS+ D + A AKSREFPMQ LI      +A   
Sbjct: 96  -------------------AQSGLALLLSTSDFYVASAKSREFPMQFLIPKKFKPVAAWI 155

Query: 121 LARLRSTGNGHLRVPHAISNNEGIRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDAT 180
              LR+           +++ E  +    R    L L      F+RESRV +   +I+ T
Sbjct: 156 SYFLRA----------IMASGESQKFPTQRLRSPLFLGQLYCSFRRESRVLHTSFNIEGT 215

Query: 181 HFILVKSNLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVI 229
             IL     ALLLSTSD   AS  S E     LIPKE D+F PE A LS+   ++
Sbjct: 216 RHILAWIGFALLLSTSDFYVASAKSPELHTHFLIPKEPDAFLPEAACLSFIQTIM 222

[Close]

BLAST of CSPI07G12010 vs. ExPASy TrEMBL
Match: A0A0A0K653 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279810 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-08
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 181 NLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVI 229
           +LALLLS SDCI A + +REFP+ I IPKELD+ W E AWLSYFLR+I
Sbjct: 69  SLALLLSASDCIVALVENREFPRDIQIPKELDALWSEAAWLSYFLRLI 116

[Close]

BLAST of CSPI07G12010 vs. NCBI nr
Match: KGN44397.1 (hypothetical protein Csa_016042 [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123
Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MHSGLKCLDSATFYSQEMRVPHAVSDTKEIQRILPKATSLACVLQTTMALSEIESQEFPA 60
           MHSGLKCLDSATFYSQEMRVPHAVSDTKEIQRILPKATSL+CVLQTTMALSEIESQEFPA
Sbjct: 1   MHSGLKCLDSATFYSQEMRVPHAVSDTKEIQRILPKATSLSCVLQTTMALSEIESQEFPA 60

Query: 61  QALTLKEPNAFFLRSGLALLLSSGDGHEAWAKSREFPMQILIFGTLCILARSSLARLRST 120
           QALTLKEPNAFFLRSGLALLLSSGDGHEAWAKSREFPMQILIFGTLCILARSSLARLRST
Sbjct: 61  QALTLKEPNAFFLRSGLALLLSSGDGHEAWAKSREFPMQILIFGTLCILARSSLARLRST 120

Query: 121 GNGHLRVPHAISNNEGIRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDATHFILVKS 180
           GNGHLRVPHAISNNEGIRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDATHFILVKS
Sbjct: 121 GNGHLRVPHAISNNEGIRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDATHFILVKS 180

Query: 181 NLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVIVM 231
           NLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVIVM
Sbjct: 181 NLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVIVM 230

[Close]

BLAST of CSPI07G12010 vs. NCBI nr
Match: KGN44050.1 (hypothetical protein Csa_011881 [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-17
Identity = 67/150 (44.67%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 89  AWAKSREFPMQILIFGTLCILARSSLARLRSTGNGHL---RVPHAISNNEG--------- 148
           AWAKSRE PMQ LI      LA S LA L STG+ ++   +V  +  ++E          
Sbjct: 2   AWAKSRELPMQFLISKEPTHLAESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYPK 61

Query: 149 ------IRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDATHFILVKSNLALLLSTSD 208
                 +  ILAR+DL LLL  GDYGF RE RVPY   D + T  IL +S LALL+S  +
Sbjct: 62  RLGSLTLYRILARSDLALLLFTGDYGFGRELRVPYENFDNNGTRCILARSGLALLISRGE 121

Query: 209 CIEASILSREFPKRILIPKELDSFWPEMAW 221
            I AS+ SREF  + L  KE ++F  E+AW
Sbjct: 122 FIVASVESREFNTQDLTLKEPNTFLLEVAW 151

[Close]

BLAST of CSPI07G12010 vs. NCBI nr
Match: KGN44662.2 (hypothetical protein Csa_023846, partial [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 2.9e-08
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 181 NLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVI 229
           +LALLLS SDCI A + +REFP+ I IPKELD+ W E AWLSYFLR+I
Sbjct: 62  SLALLLSASDCIVALVENREFPRDIQIPKELDALWSEAAWLSYFLRLI 109

[Close]

BLAST of CSPI07G12010 vs. NCBI nr
Match: KGN44395.1 (hypothetical protein Csa_016306 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 2.4e-07
Identity = 61/172 (35.47%), Postives = 77/172 (44.77%), Query Frame = 0


Query: 54  ESQEFPAQALTLKEPNAFFLR-SGLALLLSSGDGHEAWAKSREFPMQILIFGTLCILARS 113
           ES+EF  Q LTLKEP+AFF + + L+  L         A SREF  Q  I       ++ 
Sbjct: 83  ESREFNTQDLTLKEPDAFFTKVAWLSYFLR--------AMSREFSTQFHI-------SKE 142

Query: 114 SLARLRSTGNGHLRVPHAISNNEGIRHILARNDLILLLSIGDYGFKRESRVPYVGSDIDA 173
           S A L          P A             +  I  ++       RE RV ++G + + 
Sbjct: 143 SDAFL----------PEA----------AWLSYFIWAIADSSESRDREPRVLHIGFNTEG 202

Query: 174 THFILVKSNLALLLSTSDCIEASILSREFPKRILIPKELDSFWPEMAWLSYF 225
           T  IL   + ALL ST D   AS  SR FP   L  KE D+ W E AWLSYF
Sbjct: 203 TPSILALLDFALLPSTCDYYVASTKSRGFPTHFLKSKESDALWHEAAWLSYF 219

[Close]

BLAST of CSPI07G12010 vs. NCBI nr
Match: KAE8652988.1 (hypothetical protein Csa_023488 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 7.8e-06
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 190 DCIEASILSREFPKRILIPKELDSFWPEMAWLSYFLRVIVM 231
           DCI AS  SREFP +ILIPK+ D+FW E AWLSYFLR IV+
Sbjct: 3   DCIVASAESREFPMQILIPKKPDTFWHEEAWLSYFLREIVL 43

The following BLAST results are available for this feature:

BLAST of CSPI07G12010 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G12010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7T2	7.6e-124	99.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279790 PE=4 SV=1	[more]
A0A0A0K4J2	8.6e-27	51.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279850 PE=4 SV=1	[more]
A0A0A0K328	7.3e-18	44.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G140940 PE=4 SV=1	[more]
A0A0A0K9A9	1.9e-13	33.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279830 PE=4 SV=1	[more]
A0A0A0K653	1.4e-08	68.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279810 PE=4 SV=1	[more]

BLAST of CSPI07G12010 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44397.1	1.6e-123	99.57	hypothetical protein Csa_016042 [Cucumis sativus]	[more]
KGN44050.1	1.5e-17	44.67	hypothetical protein Csa_011881 [Cucumis sativus]	[more]
KGN44662.2	2.9e-08	68.75	hypothetical protein Csa_023846, partial [Cucumis sativus]	[more]
KGN44395.1	2.4e-07	35.47	hypothetical protein Csa_016306 [Cucumis sativus]	[more]
KAE8652988.1	7.8e-06	70.73	hypothetical protein Csa_023488 [Cucumis sativus]	[more]

BLAST of CSPI07G12010 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G12010.1	CSPI07G12010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding