CSPI07G11270 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G11270
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 9483786 .. 9484158 (-)
RNA-Seq ExpressionCSPI07G11270
SyntenyCSPI07G11270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACAACTTGCTCACCAGCTTGAAGTAGCATTGACGGCACTTCCCCAGCAACAGAAAATCGACAACGACAATCACCAAGAACTTCGATGCATTGTCGCCTGAAATTTCGACTAATCAGGCTGCAAAAATCACCGGAGTTCATTAGAAATGTTCGACCAAGGTGGAAACCACCTTAGAGACTGTCGACTACAAGAACCCAATATGGGTCTTCAAGATACGGAGGCTTCTGAAGAGGAAGAATAGCACTTTCGGCCACGCCCAAGAGAAAGAAGACATGGCCGATGACAGAGAGAGTTTAGATTTTAAAACCCAGTTTTCAGAAGGGGCCGAAATAGAGGAGTATCTTGAAGACCATTTGCAACCTGCCTGA

mRNA sequence

ATGGAACAACTTGCTCACCAGCTTGAAGTAGCATTGACGGCACTTCCCCAGCAACAGAAAATCGACAACGACAATCACCAAGAACTTCGATGCATTGTGGAAACCACCTTAGAGACTGTCGACTACAAGAACCCAATATGGGTCTTCAAGATACGGAGGCTTCTGAAGAGGAAGAATAGCACTTTCGGCCACGCCCAAGAGAAAGAAGACATGGCCGATGACAGAGAGAGTTTAGATTTTAAAACCCAGTTTTCAGAAGGGGCCGAAATAGAGGAGTATCTTGAAGACCATTTGCAACCTGCCTGA

Coding sequence (CDS)

ATGGAACAACTTGCTCACCAGCTTGAAGTAGCATTGACGGCACTTCCCCAGCAACAGAAAATCGACAACGACAATCACCAAGAACTTCGATGCATTGTGGAAACCACCTTAGAGACTGTCGACTACAAGAACCCAATATGGGTCTTCAAGATACGGAGGCTTCTGAAGAGGAAGAATAGCACTTTCGGCCACGCCCAAGAGAAAGAAGACATGGCCGATGACAGAGAGAGTTTAGATTTTAAAACCCAGTTTTCAGAAGGGGCCGAAATAGAGGAGTATCTTGAAGACCATTTGCAACCTGCCTGA

Protein sequence

MEQLAHQLEVALTALPQQQKIDNDNHQELRCIVETTLETVDYKNPIWVFKIRRLLKRKNSTFGHAQEKEDMADDRESLDFKTQFSEGAEIEEYLEDHLQPA*
Homology
[Close]
BLAST of CSPI07G11270 vs. ExPASy TrEMBL
Match: A0A5D3CPR5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00370 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 37 LETVDYKNPIWVFKIRRLLKRKNSTFGHAQEKEDMADDRESLDFKTQFSEGAEIEE 93
          +ET D KNP+WVFKI + L +K  T  HA+EKE+  DDR+     TQF+EG E+EE
Sbjct: 6  IETADCKNPLWVFKIWKPLMKKKRTSSHAKEKEEGTDDRDKSYIITQFTEGVEMEE 61

[Close]
BLAST of CSPI07G11270 vs. NCBI nr
Match: TYK13853.1 (uncharacterized protein E5676_scaffold832G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-06
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 37 LETVDYKNPIWVFKIRRLLKRKNSTFGHAQEKEDMADDRESLDFKTQFSEGAEIEE 93
          +ET D KNP+WVFKI + L +K  T  HA+EKE+  DDR+     TQF+EG E+EE
Sbjct: 6  IETADCKNPLWVFKIWKPLMKKKRTSSHAKEKEEGTDDRDKSYIITQFTEGVEMEE 61

The following BLAST results are available for this feature:
BLAST of CSPI07G11270 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G11270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CPR51.3e-0653.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CSPI07G11270 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK13853.12.6e-0653.57uncharacterized protein E5676_scaffold832G00370 [Cucumis melo var. makuwa][more]
BLAST of CSPI07G11270 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G11270.1CSPI07G11270.1mRNA