CSPI07G11150 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G11150
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 9351618 .. 9352067 (-)
RNA-Seq ExpressionCSPI07G11150
SyntenyCSPI07G11150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTTGAAGGACTTCTATTACATCTCCTCGTCGCTCTCCTCATGGTTCCTTTCACCCCACAGAGAAGGTTTCTGCTACCTCTGCAAATTTTCTGCTCCAAATGTTGATGACTCTACCCCTGACGTTACTATCAAAACCACTGCTCTTGGCATTCCTGACCCTACGCTTGTGAATAATGTTGCACCCCTTAGTTCATCTGCTCATGTAGTGGGCACTCCTACTTCAACAGAAAGGGTGTCTCCTTCAGTTAGTTCTTTTGTGCCTTCACCTCCTAAGCCTCCACGACGTCCTGTTTTCAAGGGTAAAAAAGTTATCATTACAAAGGTTGGAAGAAGAAAGCTGCCACCAAGTTTCCTTTTGTTCCAATTGATGGGGTGTCATTCCATTTGTAGGATAATGTCCAAAAATGGAAGTATGTGGTCCAACGATGCATTGCAAATAAGGTAA

mRNA sequence

ATGTACTTGAAGGACTTCTATTACATCTCCTCGTCGCTCTCCTCATGGTTCCTTTCACCCCACAGAGAAGGTTTCTGCTACCTCTGCAAATTTTCTGCTCCAAATGTTGATGACTCTACCCCTGACGTTACTATCAAAACCACTGCTCTTGGCATTCCTGACCCTACGCTTGTGAATAATGTTGCACCCCTTAGTTCATCTGCTCATGTAGTGGGCACTCCTACTTCAACAGAAAGGGTGTCTCCTTCAGTTAGTTCTTTTGTGCCTTCACCTCCTAAGCCTCCACGACGTCCTGTTTTCAAGGGTAAAAAAGTTATCATTACAAAGGTTGGAAGAAGAAAGCTGCCACCAAGTTTCCTTTTGTTCCAATTGATGGGGTGTCATTCCATTTGTAGGATAATGTCCAAAAATGGAAGTATGTGGTCCAACGATGCATTGCAAATAAGGTAA

Coding sequence (CDS)

ATGTACTTGAAGGACTTCTATTACATCTCCTCGTCGCTCTCCTCATGGTTCCTTTCACCCCACAGAGAAGGTTTCTGCTACCTCTGCAAATTTTCTGCTCCAAATGTTGATGACTCTACCCCTGACGTTACTATCAAAACCACTGCTCTTGGCATTCCTGACCCTACGCTTGTGAATAATGTTGCACCCCTTAGTTCATCTGCTCATGTAGTGGGCACTCCTACTTCAACAGAAAGGGTGTCTCCTTCAGTTAGTTCTTTTGTGCCTTCACCTCCTAAGCCTCCACGACGTCCTGTTTTCAAGGGTAAAAAAGTTATCATTACAAAGGTTGGAAGAAGAAAGCTGCCACCAAGTTTCCTTTTGTTCCAATTGATGGGGTGTCATTCCATTTGTAGGATAATGTCCAAAAATGGAAGTATGTGGTCCAACGATGCATTGCAAATAAGGTAA

Protein sequence

MYLKDFYYISSSLSSWFLSPHREGFCYLCKFSAPNVDDSTPDVTIKTTALGIPDPTLVNNVAPLSSSAHVVGTPTSTERVSPSVSSFVPSPPKPPRRPVFKGKKVIITKVGRRKLPPSFLLFQLMGCHSICRIMSKNGSMWSNDALQIR*
Homology
[Close]
BLAST of CSPI07G11150 vs. ExPASy TrEMBL
Match: A0A5A7SJ51 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G00830 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.4e-14
Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 0 

Query: 33  APNVDDSTPDVTIKTTALGIPDPTLVNNVAPLSSSAHVVGTPTSTERVSPSVSSFVPSPP 92
           AP VDDSTP  TI TTA  + D T V+N  P SS AH  G PTST+RVSP V S VP P 
Sbjct: 61  APFVDDSTPSDTIDTTAPRLLDSTPVDNSTPPSSYAHAKGAPTSTKRVSPLVGSSVPLPY 120

Query: 93  KPPRRPVFKGKKVIITKVGRRK 115
           KPP+RP FKG+KVI TK  +RK
Sbjct: 121 KPPQRPSFKGQKVITTKARQRK 142

[Close]
BLAST of CSPI07G11150 vs. ExPASy TrEMBL
Match: A0A5D3CE62 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00260 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.4e-14
Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 0 

Query: 33  APNVDDSTPDVTIKTTALGIPDPTLVNNVAPLSSSAHVVGTPTSTERVSPSVSSFVPSPP 92
           AP VDDSTP  TI TTA  + D T V+N  P SS AH  G PTST+RVSP V S VP P 
Sbjct: 228 APFVDDSTPSDTIDTTAPRLLDSTPVDNSTPPSSYAHAKGAPTSTKRVSPLVGSSVPLPY 287

Query: 93  KPPRRPVFKGKKVIITKVGRRK 115
           KPP+RP FKG+KVI TK  +RK
Sbjct: 288 KPPQRPSFKGQKVITTKARQRK 309

[Close]
BLAST of CSPI07G11150 vs. NCBI nr
Match: XP_031744394.1 (uncharacterized protein LOC116405024 [Cucumis sativus] >KAE8646122.1 hypothetical protein Csa_016296 [Cucumis sativus])

HSP 1 Score: 302.0 bits (772), Expect = 2.9e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 

Query: 1   MYLKDFYYISSSLSSWFLSPHREGFCYLCKFSAPNVDDSTPDVTIKTTALGIPDPTLVNN 60
           MYLKDFYYISSSLSSWFLSPHREGFCYLCKFSAPNVDDSTPDVTIKTTALGIPDPTLVNN
Sbjct: 1   MYLKDFYYISSSLSSWFLSPHREGFCYLCKFSAPNVDDSTPDVTIKTTALGIPDPTLVNN 60

Query: 61  VAPLSSSAHVVGTPTSTERVSPSVSSFVPSPPKPPRRPVFKGKKVIITKVGRRKLPPSFL 120
           VAPLSSSAHVVGTPTSTERVSPSVSSFVPSPPKPPRRPVFKGKKVIITKVGRRKLPPSFL
Sbjct: 61  VAPLSSSAHVVGTPTSTERVSPSVSSFVPSPPKPPRRPVFKGKKVIITKVGRRKLPPSFL 120

Query: 121 LFQLMGCHSICRIMSKNGSMWSNDALQIR 150
           LFQLMGCHSICRIMSKNGSMWSNDALQIR
Sbjct: 121 LFQLMGCHSICRIMSKNGSMWSNDALQIR 149

[Close]
BLAST of CSPI07G11150 vs. NCBI nr
Match: TYK09630.1 (hypothetical protein E5676_scaffold447G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-13
Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 0 

Query: 33  APNVDDSTPDVTIKTTALGIPDPTLVNNVAPLSSSAHVVGTPTSTERVSPSVSSFVPSPP 92
           AP VDDSTP  TI TTA  + D T V+N  P SS AH  G PTST+RVSP V S VP P 
Sbjct: 228 APFVDDSTPSDTIDTTAPRLLDSTPVDNSTPPSSYAHAKGAPTSTKRVSPLVGSSVPLPY 287

Query: 93  KPPRRPVFKGKKVIITKVGRRK 115
           KPP+RP FKG+KVI TK  +RK
Sbjct: 288 KPPQRPSFKGQKVITTKARQRK 309

[Close]
BLAST of CSPI07G11150 vs. NCBI nr
Match: KAA0025826.1 (hypothetical protein E6C27_scaffold34G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-13
Identity = 51/82 (62.20%), Postives = 57/82 (69.51%), Query Frame = 0 

Query: 33  APNVDDSTPDVTIKTTALGIPDPTLVNNVAPLSSSAHVVGTPTSTERVSPSVSSFVPSPP 92
           AP VDDSTP  TI TTA  + D T V+N  P SS AH  G PTST+RVSP V S VP P 
Sbjct: 61  APFVDDSTPSDTIDTTAPRLLDSTPVDNSTPPSSYAHAKGAPTSTKRVSPLVGSSVPLPY 120

Query: 93  KPPRRPVFKGKKVIITKVGRRK 115
           KPP+RP FKG+KVI TK  +RK
Sbjct: 121 KPPQRPSFKGQKVITTKARQRK 142

The following BLAST results are available for this feature:
BLAST of CSPI07G11150 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G11150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SJ515.4e-1462.20Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CE625.4e-1462.20Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CSPI07G11150 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031744394.12.9e-78100.00uncharacterized protein LOC116405024 [Cucumis sativus] >KAE8646122.1 hypothetica... [more]
TYK09630.11.1e-1362.20hypothetical protein E5676_scaffold447G00260 [Cucumis melo var. makuwa][more]
KAA0025826.11.1e-1362.20hypothetical protein E6C27_scaffold34G00830 [Cucumis melo var. makuwa][more]
BLAST of CSPI07G11150 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G11150.1CSPI07G11150.1mRNA