CSPI07G10620 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G10620
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 8697404 .. 8698122 (+)
RNA-Seq ExpressionCSPI07G10620
SyntenyCSPI07G10620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGGAAATTTTTCCCTGCGAAAAACTTGATGCTTGAAGAATTTCCGTGAAAAATCCCCGCCTAGTTCCCCATGGGGAATTTGGTGGGGATGGGGAATGGAATAGGGGAGTGGGGGTGGGGACGAGGAGTGACATCCCTAGCCCCGCCCTGCCTCGTGGACATCTCTAGCGGCAGTTGGAGACAAGGGTGGCACAGGCGGCGAATGACGGGCGACAGGTGGTGGGCTTCCTTGATTCTAGAATGTATGCGGCAGCTGTTCGACTCTCGTTCTTCCTTTCTCTTCCTCTCTTCCAAATTTGGGAGGGTTTTTATAGGGGAACTCTCGACGCACCACAAAATTGTCGGGAGTTCCCATCCATTTTCGACGCCATTAGTAACATGTCAAAAGTAACCACACAACTCATGACGTGTACATGCATGGCGTTAGACAAAACACAATAATTGTTTAATTGTTTTCTTTTTTTTCGATGCCTTGCATTTGCATGGCAGGAGTTGTGTGGCTATTCCCGATGTGTTACTAATGGCGTTGAGAATACCCCCACAACTCTCAACAGTTTAAACGCAACGTCGACGAATATTGAGGTGACCGACGCTCACCTTACAACATTAGAGGAGACACGTTATCTCCCGACGCCTTATAGTCTGGCGTTCTAGATAAAGGTCGAGATATCCCCATTTTCTTCTAGTAATGTTTGCCTTGGAACGACCTTACTAATCAG

mRNA sequence

CGGGAAATTTTTCCCTGCGAAAAACTTGATGCTTGAAGAATTTCCGTGAAAAATCCCCGCCTAGTTCCCCATGGGGAATTTGGTGGGGATGGGGAATGGAATAGGGGAGTGGGGGTGGGGACGAGGAGTGACATCCCTAGCCCCGCCCTGCCTCGTGGACATCTCTAGCGGCAGTTGGAGACAAGGGTGGCACAGGCGGCGAATGACGGGCGACAGGTGGTGGGCTTCCTTGATTCTAGAATGTATGCGGCAGCTGTTCGACTCTCGTTCTTCCTTTCTCTTCCTCTCTTCCAAATTTGGGAGGGTTTTTATAGGGGAACTCTCGACGCACCACAAAATTGTCGGGAGTTCCCATCCATTTTCGACGCCATTAGTAACATGTCAAAAGTAACCACACAACTCATGACGTGTACATGCATGGCGTTAGACAAAACACAATAATTGTTTAATTGTTTTCTTTTTTTTCGATGCCTTGCATTTGCATGGCAGGAGTTGTGTGGCTATTCCCGATGTGTTACTAATGGCGTTGAGAATACCCCCACAACTCTCAACAGTTTAAACGCAACGTCGACGAATATTGAGGTGACCGACGCTCACCTTACAACATTAGAGGAGACACGTTATCTCCCGACGCCTTATAGTCTGGCGTTCTAGATAAAGGTCGAGATATCCCCATTTTCTTCTAGTAATGTTTGCCTTGGAACGACCTTACTAATCAG

Coding sequence (CDS)

ATGGGGAATTTGGTGGGGATGGGGAATGGAATAGGGGAGTGGGGGTGGGGACGAGGAGTGACATCCCTAGCCCCGCCCTGCCTCGTGGACATCTCTAGCGGCAGTTGGAGACAAGGGTGGCACAGGCGGCGAATGACGGGCGACAGGTGGTGGGCTTCCTTGATTCTAGAATGTATGCGGCAGCTGTTCGACTCTCGTTCTTCCTTTCTCTTCCTCTCTTCCAAATTTGGGAGGGTTTTTATAGGGGAACTCTCGACGCACCACAAAATTGTCGGGAGTTCCCATCCATTTTCGACGCCATTAGTAACATGTCAAAAGTAA

Protein sequence

MGNLVGMGNGIGEWGWGRGVTSLAPPCLVDISSGSWRQGWHRRRMTGDRWWASLILECMRQLFDSRSSFLFLSSKFGRVFIGELSTHHKIVGSSHPFSTPLVTCQK*
Homology
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BLAST of CSPI07G10620 vs. ExPASy TrEMBL
Match: A0A0A0K5M8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G235240 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.3e-29
Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 0 

Query: 1  MGNLVGMGNGIGEWGWGRGVTSLAPPCLVDISSGSWRQGWHRRRMTGDRWWASLILECMR 60
          MGNLVGMGNGIGEWGWGRGVTSLAPPCLVDISSGSWRQGWHRRRMTGD+WWASLILECM+
Sbjct: 1  MGNLVGMGNGIGEWGWGRGVTSLAPPCLVDISSGSWRQGWHRRRMTGDKWWASLILECMQ 60

Query: 61 QLFDSRSSFLFLSS 75
          +L    ++   L+S
Sbjct: 61 RLNGVENTLTTLNS 74

The following BLAST results are available for this feature:
BLAST of CSPI07G10620 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G10620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5M83.3e-2982.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G235240 PE=4 SV=1[more]
BLAST of CSPI07G10620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI07G10620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G10620.1CSPI07G10620.1mRNA