CSPI07G09630 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G09630
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMuDRA-like transposase
LocationChr7: 7610140 .. 7610553 (-)
RNA-Seq ExpressionCSPI07G09630
SyntenyCSPI07G09630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGTGAAACCAAGAAACCTGATTCCCCTAATCCTAACCTTAAGTGCTCACATGTATCAACTGAGGTCCACGAGCTGAGTCTATTGACTGCGAATGTGTGTCCCTTAGAGTTGGGAGACAACTGAAAATGGTTTCAGTGGCAATGCATTGACAATTACGAGTTAGTGAACAATTTTGGCCATGACAGTGGAATTGAACTCCGAGGTGATGATGAGAATATTGGTCTTCATATGGACTTGGAAGTAGAACTCGGAGGTGATTATAAGAATCTTGATCTTCGTGGTGTTGATATGTCTGAGGCAGATGCCCAAGTACATCATGAAGAATTGCCACTTGAGGAAGGTGCAGTGGAAAGTGATGACGAAAAAGTTCTTCCAATCAGTTGGCAAGAAAAAGTGAAAACATGTTGA

mRNA sequence

ATGGCGAGTGAAACCAAGAAACCTGATTCCCCTAATCCTAACCTTAAGTGCTCACATGTATCAACTGAGGTCCACGAGCTGAGTCTATTGACTGCGAATTGGCAATGCATTGACAATTACGAGTTAGTGAACAATTTTGGCCATGACAGTGGAATTGAACTCCGAGGTGATGATGAGAATATTGGTCTTCATATGGACTTGGAAGTAGAACTCGGAGGTGATTATAAGAATCTTGATCTTCGTGGTGTTGATATGTCTGAGGCAGATGCCCAAGTACATCATGAAGAATTGCCACTTGAGGAAGGTGCAGTGGAAAGTGATGACGAAAAAGTTCTTCCAATCAGTTGGCAAGAAAAAGTGAAAACATGTTGA

Coding sequence (CDS)

ATGGCGAGTGAAACCAAGAAACCTGATTCCCCTAATCCTAACCTTAAGTGCTCACATGTATCAACTGAGGTCCACGAGCTGAGTCTATTGACTGCGAATTGGCAATGCATTGACAATTACGAGTTAGTGAACAATTTTGGCCATGACAGTGGAATTGAACTCCGAGGTGATGATGAGAATATTGGTCTTCATATGGACTTGGAAGTAGAACTCGGAGGTGATTATAAGAATCTTGATCTTCGTGGTGTTGATATGTCTGAGGCAGATGCCCAAGTACATCATGAAGAATTGCCACTTGAGGAAGGTGCAGTGGAAAGTGATGACGAAAAAGTTCTTCCAATCAGTTGGCAAGAAAAAGTGAAAACATGTTGA

Protein sequence

MASETKKPDSPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIELRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLPISWQEKVKTC*
Homology
[Close]
BLAST of CSPI07G09630 vs. ExPASy TrEMBL
Match: A0A0A0K393 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G206960 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.6e-57
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MASETKKPDSPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIELRGDDEN 60
           MASETKKP+SPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIE RGDDEN
Sbjct: 1   MASETKKPNSPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIEHRGDDEN 60

Query: 61  IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLPISWQEK 120
           IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLP   ++K
Sbjct: 61  IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLPSVGKKK 119

[Close]
BLAST of CSPI07G09630 vs. ExPASy TrEMBL
Match: A0A5D3CWR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001190 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10
Identity = 44/77 (57.14%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 1  MASETKKPDSPNPNLKCSHVSTEVHELSLLTAN------------WQCIDNYELVNNFGH 60
          MASE+KKP SPNPN K SHVS E+ ELS LT N            +  IDN E V+N G 
Sbjct: 1  MASESKKPHSPNPNPKHSHVSNEIRELSPLTTNMCPLELEDNGYGFGNIDNDEFVDNVGP 60

Query: 61 DSGIELRGDDENIGLHM 66
          DSG EL+GDDEN+GL M
Sbjct: 61 DSGSELQGDDENLGLLM 77

[Close]
BLAST of CSPI07G09630 vs. ExPASy TrEMBL
Match: A0A5A7V6Z2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001120 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10
Identity = 44/77 (57.14%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 1  MASETKKPDSPNPNLKCSHVSTEVHELSLLTAN------------WQCIDNYELVNNFGH 60
          MASE+KKP SPNPN K SHVS E+ ELS LT N            +  IDN E V+N G 
Sbjct: 1  MASESKKPHSPNPNPKHSHVSNEIRELSPLTTNMCPLELEDNGYGFGNIDNDEFVDNVGP 60

Query: 61 DSGIELRGDDENIGLHM 66
          DSG EL+GDDEN+GL M
Sbjct: 61 DSGSELQGDDENLGLLM 77

[Close]
BLAST of CSPI07G09630 vs. ExPASy TrEMBL
Match: A0A0A0K9J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057140 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.3e-08
Identity = 47/113 (41.59%), Postives = 56/113 (49.56%), Query Frame = 0 

Query: 1   MASETKKPDSPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIELRGDDEN 60
           MA E+ KPD+PNPNLKCSH+ T+V EL L T N                  +EL GD+EN
Sbjct: 1   MARESNKPDAPNPNLKCSHILTKVCELILFTTNM---------------CPLEL-GDNEN 60

Query: 61  IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLP 114
                                       D QV HEE+PL+EGAVESDDE+V P
Sbjct: 61  --------------------------GFDVQVDHEEVPLKEGAVESDDEEVPP 71

[Close]
BLAST of CSPI07G09630 vs. ExPASy TrEMBL
Match: A0A5D3C7U6 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001830 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-05
Identity = 44/134 (32.84%), Postives = 65/134 (48.51%), Query Frame = 0 

Query: 1   MASETKKPDSPNPNLKCSHVSTEVHELSLLTAN------------WQCIDNYELVNNFGH 60
           M S++KK D P PNL CSHVS E   L  L  N               IDN E V++ GH
Sbjct: 10  MVSKSKKLDFPTPNLNCSHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVDDGGH 69

Query: 61  DSGIELRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHE-ELPLEEGAVESD 120
           +S IE +GDD+  GLH                    M +++AQ+H+E  +  E   ++SD
Sbjct: 70  ESDIEFKGDDDVHGLH--------------------MFDSNAQLHYEVNIDNEHEILKSD 123

Query: 121 DEKVLPISWQEKVK 122
           +++   +  ++K K
Sbjct: 130 EDESPHLITKKKQK 123

[Close]
BLAST of CSPI07G09630 vs. NCBI nr
Match: KAE8646045.1 (hypothetical protein Csa_016067, partial [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 2.1e-37
Identity = 80/86 (93.02%), Postives = 82/86 (95.35%), Query Frame = 0 

Query: 34  WQCIDNYELVNNFGHDSGIELRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVH 93
           WQCIDNYELVNNFGHDSGIE RGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVH
Sbjct: 1   WQCIDNYELVNNFGHDSGIEHRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVH 60

Query: 94  HEELPLEEGAVESDDEKVLPISWQEK 120
           HEELPLEEGAVESDDEKVLP   ++K
Sbjct: 61  HEELPLEEGAVESDDEKVLPSVGKKK 86

[Close]
BLAST of CSPI07G09630 vs. NCBI nr
Match: TYK16337.1 (hypothetical protein E5676_scaffold21G001190 [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-10
Identity = 44/77 (57.14%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 1  MASETKKPDSPNPNLKCSHVSTEVHELSLLTAN------------WQCIDNYELVNNFGH 60
          MASE+KKP SPNPN K SHVS E+ ELS LT N            +  IDN E V+N G 
Sbjct: 1  MASESKKPHSPNPNPKHSHVSNEIRELSPLTTNMCPLELEDNGYGFGNIDNDEFVDNVGP 60

Query: 61 DSGIELRGDDENIGLHM 66
          DSG EL+GDDEN+GL M
Sbjct: 61 DSGSELQGDDENLGLLM 77

[Close]
BLAST of CSPI07G09630 vs. NCBI nr
Match: KAA0063010.1 (hypothetical protein E6C27_scaffold468G001120 [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-10
Identity = 44/77 (57.14%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 1  MASETKKPDSPNPNLKCSHVSTEVHELSLLTAN------------WQCIDNYELVNNFGH 60
          MASE+KKP SPNPN K SHVS E+ ELS LT N            +  IDN E V+N G 
Sbjct: 1  MASESKKPHSPNPNPKHSHVSNEIRELSPLTTNMCPLELEDNGYGFGNIDNDEFVDNVGP 60

Query: 61 DSGIELRGDDENIGLHM 66
          DSG EL+GDDEN+GL M
Sbjct: 61 DSGSELQGDDENLGLLM 77

[Close]
BLAST of CSPI07G09630 vs. NCBI nr
Match: KAE8652907.1 (hypothetical protein Csa_022657 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-07
Identity = 47/113 (41.59%), Postives = 56/113 (49.56%), Query Frame = 0 

Query: 1   MASETKKPDSPNPNLKCSHVSTEVHELSLLTANWQCIDNYELVNNFGHDSGIELRGDDEN 60
           MA E+ KPD+PNPNLKCSH+ T+V EL L T N                  +EL GD+EN
Sbjct: 1   MARESNKPDAPNPNLKCSHILTKVCELILFTTNM---------------CPLEL-GDNEN 60

Query: 61  IGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHEELPLEEGAVESDDEKVLP 114
                                       D QV HEE+PL+EGAVESDDE+V P
Sbjct: 61  --------------------------GFDVQVDHEEVPLKEGAVESDDEEVPP 71

[Close]
BLAST of CSPI07G09630 vs. NCBI nr
Match: TYK08037.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 2.7e-05
Identity = 44/134 (32.84%), Postives = 65/134 (48.51%), Query Frame = 0 

Query: 1   MASETKKPDSPNPNLKCSHVSTEVHELSLLTAN------------WQCIDNYELVNNFGH 60
           M S++KK D P PNL CSHVS E   L  L  N               IDN E V++ GH
Sbjct: 10  MVSKSKKLDFPTPNLNCSHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVDDGGH 69

Query: 61  DSGIELRGDDENIGLHMDLEVELGGDYKNLDLRGVDMSEADAQVHHE-ELPLEEGAVESD 120
           +S IE +GDD+  GLH                    M +++AQ+H+E  +  E   ++SD
Sbjct: 70  ESDIEFKGDDDVHGLH--------------------MFDSNAQLHYEVNIDNEHEILKSD 123

Query: 121 DEKVLPISWQEKVK 122
           +++   +  ++K K
Sbjct: 130 EDESPHLITKKKQK 123

The following BLAST results are available for this feature:
BLAST of CSPI07G09630 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G09630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3939.6e-5794.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G206960 PE=4 SV=1[more]
A0A5D3CWR61.0e-1057.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V6Z21.0e-1057.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0K9J46.3e-0841.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057140 PE=4 SV=1[more]
A0A5D3C7U61.3e-0532.84MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
BLAST of CSPI07G09630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646045.12.1e-3793.02hypothetical protein Csa_016067, partial [Cucumis sativus][more]
TYK16337.12.1e-1057.14hypothetical protein E5676_scaffold21G001190 [Cucumis melo var. makuwa][more]
KAA0063010.12.1e-1057.14hypothetical protein E6C27_scaffold468G001120 [Cucumis melo var. makuwa][more]
KAE8652907.11.3e-0741.59hypothetical protein Csa_022657 [Cucumis sativus][more]
TYK08037.12.7e-0532.84MuDRA-like transposase [Cucumis melo var. makuwa][more]
BLAST of CSPI07G09630 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G09630.1CSPI07G09630.1mRNA