CSPI07G09480 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G09480
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionIntegrase catalytic domain-containing protein
LocationChr7: 7493456 .. 7494181 (+)
RNA-Seq ExpressionCSPI07G09480
SyntenyCSPI07G09480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAATTCGGTCTCGGCTTGGTTAGGACAAGCAAGATACTTCTTGGGTCTAGAATTATCAAGATCTGAACGAGGACTTATGCTCTCCCAAAGAAAATATTGTCTTCAAATCCTAGAAGATACTGGTTTTCTTGATTCTAAACCAGTTGTAGCACCTATGGATCCTAATCTGAAGCTATGTAAATTTGAAGGAGAACAAATAACTGAGGAAGACGCCACTTGCTATAGAAGATTAATTGGCAGATTGATATACTTACAAATATCCAGTCCTGATCTTTGCTTCTTTGTTCACCGCTTAAGCCAATTTTTGCACAAACCAACTAAACATCACCTAGATGCTGCTCATCACCTATTGAAGTACCTCAAAGGTTCCCCAGGACAAGGTGTTTTAATAAAACCTATTGATTCGTTTCACTTAAAAGCCTTCGTTGATGCTGATTGGGGATCGTGCTTTGACACTAGAAGATCGGTCACAGGGTTCTGTATCTTCCTAGGGGATTTCATCATCTCCTGGAAATCTAAGAAACAAGCAACCGTCTCAAGGTCCTCTGCAGAAGCTGAATATAGGGTCTTAGCATCAGTCACCAGTGAGCTAGTATGGATCACACAGCTGCTTACTGATTTTAAAGTAAAGACCTTGATGCCAACCACTGTTTTCTGTGATAATCAAGCAGTCATTGCTATTGCTTCGAATCCGACATTTCATGAAGGACAAAGCACATAG

mRNA sequence

ATGGATAATTCGGTCTCGGCTTGGTTAGGACAAGCAAGATACTTCTTGGGTCTAGAATTATCAAGATCTGAACGAGGACTTATGCTCTCCCAAAGAAAATATTGTCTTCAAATCCTAGAAGATACTGGTTTTCTTGATTCTAAACCAGTTGTAGCACCTATGGATCCTAATCTGAAGCTATGTAAATTTGAAGGAGAACAAATAACTGAGGAAGACGCCACTTGCTATAGAAGATTAATTGGCAGATTGATATACTTACAAATATCCAGTCCTGATCTTTGCTTCTTTGTTCACCGCTTAAGCCAATTTTTGCACAAACCAACTAAACATCACCTAGATGCTGCTCATCACCTATTGAAGTACCTCAAAGGTTCCCCAGGACAAGGTGTTTTAATAAAACCTATTGATTCGTTTCACTTAAAAGCCTTCGTTGATGCTGATTGGGGATCGTGCTTTGACACTAGAAGATCGGTCACAGGGTTCTGTATCTTCCTAGGGGATTTCATCATCTCCTGGAAATCTAAGAAACAAGCAACCGTCTCAAGGTCCTCTGCAGAAGCTGAATATAGGGTCTTAGCATCAGTCACCAGTGAGCTAGTATGGATCACACAGCTGCTTACTGATTTTAAAGTAAAGACCTTGATGCCAACCACTGTTTTCTGTGATAATCAAGCAGTCATTGCTATTGCTTCGAATCCGACATTTCATGAAGGACAAAGCACATAG

Coding sequence (CDS)

ATGGATAATTCGGTCTCGGCTTGGTTAGGACAAGCAAGATACTTCTTGGGTCTAGAATTATCAAGATCTGAACGAGGACTTATGCTCTCCCAAAGAAAATATTGTCTTCAAATCCTAGAAGATACTGGTTTTCTTGATTCTAAACCAGTTGTAGCACCTATGGATCCTAATCTGAAGCTATGTAAATTTGAAGGAGAACAAATAACTGAGGAAGACGCCACTTGCTATAGAAGATTAATTGGCAGATTGATATACTTACAAATATCCAGTCCTGATCTTTGCTTCTTTGTTCACCGCTTAAGCCAATTTTTGCACAAACCAACTAAACATCACCTAGATGCTGCTCATCACCTATTGAAGTACCTCAAAGGTTCCCCAGGACAAGGTGTTTTAATAAAACCTATTGATTCGTTTCACTTAAAAGCCTTCGTTGATGCTGATTGGGGATCGTGCTTTGACACTAGAAGATCGGTCACAGGGTTCTGTATCTTCCTAGGGGATTTCATCATCTCCTGGAAATCTAAGAAACAAGCAACCGTCTCAAGGTCCTCTGCAGAAGCTGAATATAGGGTCTTAGCATCAGTCACCAGTGAGCTAGTATGGATCACACAGCTGCTTACTGATTTTAAAGTAAAGACCTTGATGCCAACCACTGTTTTCTGTGATAATCAAGCAGTCATTGCTATTGCTTCGAATCCGACATTTCATGAAGGACAAAGCACATAG

Protein sequence

MDNSVSAWLGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQITEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQGVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAEYRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHEGQST*
Homology
BLAST of CSPI07G09480 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.6e-51
Identity = 98/226 (43.36%), Postives = 138/226 (61.06%), Query Frame = 0

Query: 11   QARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQITE 70
            +  YFLG+E  R   GL LSQR+Y L +L  T  + +KPV  PM P+ KL  + G ++T 
Sbjct: 1182 ELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLT- 1241

Query: 71   EDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQGV 130
             D T YR ++G L YL  + PD+ + V+RLSQF+H PT+ HL A   +L+YL G+P  G+
Sbjct: 1242 -DPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGI 1301

Query: 131  LIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAEYR 190
             +K  ++  L A+ DADW    D   S  G+ ++LG   ISW SKKQ  V RSS EAEYR
Sbjct: 1302 FLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1361

Query: 191  VLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFH 237
             +A+ +SE+ WI  LLT+  ++   P  ++CDN     + +NP FH
Sbjct: 1362 SVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFH 1405

BLAST of CSPI07G09480 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.8e-48
Identity = 97/223 (43.50%), Postives = 134/223 (60.09%), Query Frame = 0

Query: 14   YFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQITEEDA 73
            YFLG+E  R  +GL LSQR+Y L +L  T  L +KPV  PM  + KL    G ++   D 
Sbjct: 1168 YFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKL--PDP 1227

Query: 74   TCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQGVLIK 133
            T YR ++G L YL  + PDL + V+RLSQ++H PT  H +A   +L+YL G+P  G+ +K
Sbjct: 1228 TEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1287

Query: 134  PIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAEYRVLA 193
              ++  L A+ DADW    D   S  G+ ++LG   ISW SKKQ  V RSS EAEYR +A
Sbjct: 1288 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVA 1347

Query: 194  SVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFH 237
            + +SEL WI  LLT+  ++   P  ++CDN     + +NP FH
Sbjct: 1348 NTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFH 1388

BLAST of CSPI07G09480 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.8e-38
Identity = 81/193 (41.97%), Postives = 112/193 (58.03%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LG   YFLG+++     GL LSQ KY  QIL + G LD KP+  P+   L       +  
Sbjct: 36  LGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY- 95

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
              D + +R ++G L YL ++ PD+ + V+ + Q +H+PT    D    +L+Y+KG+   
Sbjct: 96  --PDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFH 155

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           G+ I      +++AF D+DW  C  TRRS TGFC FLG  IISW +K+Q TVSRSS E E
Sbjct: 156 GLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETE 215

Query: 189 YRVLASVTSELVW 202
           YR LA   +EL W
Sbjct: 216 YRALALTAAELTW 225

BLAST of CSPI07G09480 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-27
Identity = 77/235 (32.77%), Postives = 119/235 (50.64%), Query Frame = 0

Query: 9    LGQARYFLGLEL--SRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGE 68
            LG A+  LG+++   R+ R L LSQ KY  ++LE     ++KPV  P+  +LKL K    
Sbjct: 1038 LGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCP 1097

Query: 69   QITEEDATC----YRRLIGRLIYLQI-SSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKY 128
               EE        Y   +G L+Y  + + PD+   V  +S+FL  P K H +A   +L+Y
Sbjct: 1098 TTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRY 1157

Query: 129  LKGSPGQGVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVS 188
            L+G+ G  +     D   LK + DAD     D R+S TG+        ISW+SK Q  V+
Sbjct: 1158 LRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVA 1217

Query: 189  RSSAEAEYRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFH 237
             S+ EAEY        E++W+ + L +  +       V+CD+Q+ I ++ N  +H
Sbjct: 1218 LSTTEAEYIAATETGKEMIWLKRFLQELGLHQ-KEYVVYCDSQSAIDLSKNSMYH 1270

BLAST of CSPI07G09480 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25
Identity = 74/233 (31.76%), Postives = 119/233 (51.07%), Query Frame = 0

Query: 9    LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
            L + ++F+G+ +   E  + LSQ  Y  +IL      +   V  P+   +    +E    
Sbjct: 1117 LNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKI---NYELLNS 1176

Query: 69   TEEDATCYRRLIGRLIYLQI-SSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPG 128
             E+  T  R LIG L+Y+ + + PDL   V+ LS++  K           +L+YLKG+  
Sbjct: 1177 DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTID 1236

Query: 129  QGVLIKPIDSFHLK--AFVDADWGSCFDTRRSVTGFCIFLGDF-IISWKSKKQATVSRSS 188
              ++ K   +F  K   +VD+DW      R+S TG+   + DF +I W +K+Q +V+ SS
Sbjct: 1237 MKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASS 1296

Query: 189  AEAEYRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
             EAEY  L     E +W+  LLT   +K   P  ++ DNQ  I+IA+NP+ H+
Sbjct: 1297 TEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHK 1346

BLAST of CSPI07G09480 vs. ExPASy TrEMBL
Match: A0A5D3DVP4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00430 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.8e-75
Identity = 136/229 (59.39%), Postives = 174/229 (75.98%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LGQ +YFLGLELSRS  G+ LSQRKYCLQILED+GFL +KP   PM P+L+L    G  +
Sbjct: 602 LGQEKYFLGLELSRSTTGIYLSQRKYCLQILEDSGFLAAKPTQCPMVPSLRLSTTSGNAL 661

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
            +EDA+ YRRLIGRL+YLQIS PD+ ++VH+LSQFL +P   HL A HHLL+YLKG+  Q
Sbjct: 662 DDEDASSYRRLIGRLLYLQISRPDVSYYVHKLSQFLARPHTEHLIAVHHLLRYLKGTTRQ 721

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           G+++     F++K FVD DW  C DT++S+TGFCIFL   ++SWK+KKQAT SRSS EA+
Sbjct: 722 GIMLWASKEFNIKVFVDLDWRCCLDTKKSITGFCIFLEKSLVSWKTKKQATFSRSSTEAK 781

Query: 189 YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
           YR L SV+SE+ W+T LL D ++    P  ++CDN+A I+IASNPTFHE
Sbjct: 782 YRGLTSVSSEITWLTHLLQDLQIPHQEPALIYCDNRATISIASNPTFHE 830

BLAST of CSPI07G09480 vs. ExPASy TrEMBL
Match: A0A6J1C0G9 (uncharacterized protein LOC111006944 OS=Momordica charantia OX=3673 GN=LOC111006944 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 1.1e-72
Identity = 135/229 (58.95%), Postives = 170/229 (74.24%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LG  +YFLGLE++RS +G+ LSQR Y L +LE+ G L  KP   PMDP+  L   + + +
Sbjct: 143 LGSLKYFLGLEVARSSKGISLSQRHYTLTLLEEFGLLGCKPTAVPMDPSTTLRLSDSDLL 202

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
              D T YRRLIG+L+YL IS PD+ + VH+LSQF+ KP K HL AA +LL+YLKGSPGQ
Sbjct: 203 --HDPTVYRRLIGKLLYLTISRPDITYAVHKLSQFVSKPCKSHLAAAFYLLRYLKGSPGQ 262

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           GV +    SF L+AF DADWGSC DTRRS TGFC+F+G  ++SWKSKKQ T+SRSSAEAE
Sbjct: 263 GVFLSASSSFKLRAFADADWGSCPDTRRSTTGFCVFMGTSLVSWKSKKQTTISRSSAEAE 322

Query: 189 YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
           YR LA+V+ EL+W++ LLTD +V   +P  VFCDNQA I +A+NP FHE
Sbjct: 323 YRALAAVSCELLWLSHLLTDLQVDFTLPALVFCDNQAAIHLATNPVFHE 369

BLAST of CSPI07G09480 vs. ExPASy TrEMBL
Match: A0A5A7VQN7 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G002210 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.9e-72
Identity = 132/229 (57.64%), Postives = 172/229 (75.11%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LG  ++FLGLEL+R+  GL LSQ+ Y LQ++EDTG L +KP   PMDP  KL   + + +
Sbjct: 734 LGPLKFFLGLELARNSSGLFLSQKNYTLQLIEDTGLLGAKPTFVPMDPTTKLNASDKDIL 793

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
              DAT YRRLIGRL+YL IS PD+ F VH+LSQF+ KPT +H++AA+HL+KYLKGSPG+
Sbjct: 794 --HDATPYRRLIGRLLYLTISRPDITFAVHKLSQFMAKPTINHMNAANHLIKYLKGSPGK 853

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           G+++  +  F + AF DA+WGS  DTRRSVTGFC+FLG+ ++SWKSKKQ TV+RSSAEAE
Sbjct: 854 GIMLPKVQDFSINAFADANWGSYLDTRRSVTGFCVFLGNSLVSWKSKKQQTVARSSAEAE 913

Query: 189 YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
           Y+ L   T E++W+  LL + K+K   P  +FCDNQA I IA+NP FHE
Sbjct: 914 YQALTVTTCEVIWLRSLLNELKIKAPSPALLFCDNQAAIYIANNPMFHE 960

BLAST of CSPI07G09480 vs. ExPASy TrEMBL
Match: A0A2N9FI02 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14764 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.2e-71
Identity = 137/229 (59.83%), Postives = 167/229 (72.93%), Query Frame = 0

Query: 9    LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
            LG A+YFLGLEL+R+ +G+ L QRKY L IL+DTGFL SKPV  PM+ +LKL K EG  +
Sbjct: 957  LGPAKYFLGLELARTAKGISLCQRKYTLDILQDTGFLGSKPVKFPMEQHLKLSKDEGPAL 1016

Query: 69   TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
               D T YRRLIG+L+YL ++ PD+ + V RLSQF+ +P   HL AAH +L+YLKGSPGQ
Sbjct: 1017 --PDPTVYRRLIGKLLYLTLTRPDISYSVSRLSQFMDQPRAPHLHAAHRVLQYLKGSPGQ 1076

Query: 129  GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
            G+      S  LKAF D+DW  C DTRRSVTGFCIFLGD +ISW+SKKQ+ VSRSSAEAE
Sbjct: 1077 GLFFSSHTSLQLKAFCDSDWAGCSDTRRSVTGFCIFLGDSLISWRSKKQSIVSRSSAEAE 1136

Query: 189  YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
            YR +A  T E+ W+  LL DF +   M   +FCDNQA + IASNP FHE
Sbjct: 1137 YRAMAVTTCEITWLLSLLKDFHISHPMAAVLFCDNQAALHIASNPVFHE 1183

BLAST of CSPI07G09480 vs. ExPASy TrEMBL
Match: A0A2N9ERT7 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5420 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.2e-71
Identity = 137/229 (59.83%), Postives = 167/229 (72.93%), Query Frame = 0

Query: 9    LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
            LG A+YFLGLEL+R+ +G+ L QRKY L IL+DTGFL SKPV  PM+ +LKL K EG  +
Sbjct: 1074 LGPAKYFLGLELARTAKGISLCQRKYTLDILQDTGFLGSKPVKFPMEQHLKLSKDEGPAL 1133

Query: 69   TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
               D T YRRLIG+L+YL ++ PD+ + V RLSQF+ +P   HL AAH +L+YLKGSPGQ
Sbjct: 1134 --PDPTVYRRLIGKLLYLTLTRPDISYSVSRLSQFMDQPRAPHLHAAHRVLQYLKGSPGQ 1193

Query: 129  GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
            G+      S  LKAF D+DW  C DTRRSVTGFCIFLGD +ISW+SKKQ+ VSRSSAEAE
Sbjct: 1194 GLFFSSHTSLQLKAFCDSDWAGCSDTRRSVTGFCIFLGDSLISWRSKKQSIVSRSSAEAE 1253

Query: 189  YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
            YR +A  T E+ W+  LL DF +   M   +FCDNQA + IASNP FHE
Sbjct: 1254 YRAMAVTTCEITWLLSLLKDFHISHPMAAVLFCDNQAALHIASNPVFHE 1300

BLAST of CSPI07G09480 vs. NCBI nr
Match: XP_031745923.1 (uncharacterized protein LOC116406346 [Cucumis sativus] >XP_031745939.1 uncharacterized protein LOC116406359 [Cucumis sativus])

HSP 1 Score: 443.7 bits (1140), Expect = 9.9e-121
Identity = 216/229 (94.32%), Postives = 219/229 (95.63%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSK VVAPMDPNLKLCK EGEQ+
Sbjct: 121 LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKSVVAPMDPNLKLCKSEGEQL 180

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
           TEEDATCYRRLIGRLIYLQIS PD+CF VHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ
Sbjct: 181 TEEDATCYRRLIGRLIYLQISRPDICFSVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 240

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           GVLIKPIDSFHLKAFVDADWGSC DTRRSVTGFCIFLGD IISWKSKKQ TVSRSSAEAE
Sbjct: 241 GVLIKPIDSFHLKAFVDADWGSCLDTRRSVTGFCIFLGDSIISWKSKKQPTVSRSSAEAE 300

Query: 189 YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
           YR L SVTSELVWITQLLTDFK+KTLMPTTVFCDNQA IAIASNPTFHE
Sbjct: 301 YRALTSVTSELVWITQLLTDFKIKTLMPTTVFCDNQAAIAIASNPTFHE 349

BLAST of CSPI07G09480 vs. NCBI nr
Match: XP_031744313.1 (uncharacterized protein LOC116404977 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 7.1e-119
Identity = 215/229 (93.89%), Postives = 217/229 (94.76%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCK EGEQ+
Sbjct: 121 LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKSEGEQL 180

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
            EEDATCYRRLIGRLIYLQIS PD+CF VHRLSQFLHKPTKHHLDAAHHLLKYLKGS GQ
Sbjct: 181 IEEDATCYRRLIGRLIYLQISRPDICFSVHRLSQFLHKPTKHHLDAAHHLLKYLKGSSGQ 240

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           GVLIKPIDSFHLKAFV ADWGSC DTRRSVTGFCIFLGD IISWKSKKQ TVSRSSAEAE
Sbjct: 241 GVLIKPIDSFHLKAFVVADWGSCLDTRRSVTGFCIFLGDSIISWKSKKQPTVSRSSAEAE 300

Query: 189 YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
           YR LASVTSELVWITQLLTDFKVKTLMPTTVFCDNQA IAI SNPTFHE
Sbjct: 301 YRALASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAAIAIDSNPTFHE 349

BLAST of CSPI07G09480 vs. NCBI nr
Match: XP_038896371.1 (uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida])

HSP 1 Score: 380.2 bits (975), Expect = 1.4e-101
Identity = 182/229 (79.48%), Postives = 202/229 (88.21%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LG A+YFLGLELSRS++G+M+SQRKYCLQILEDTGFL++KPV  PMDPNLKL K EGE +
Sbjct: 104 LGYAKYFLGLELSRSQQGIMISQRKYCLQILEDTGFLEAKPVTTPMDPNLKLSKNEGEFL 163

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
             +D TCYRRLI RLIYLQIS PD+CF +HRLSQF+H PTK  L+AAHHLL+YLK SPGQ
Sbjct: 164 KADDITCYRRLICRLIYLQISQPDICFAIHRLSQFIHSPTKVQLNAAHHLLRYLKQSPGQ 223

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           G+LI PI SFHLKAFVD DWGSC DTRRS+TGFCIFLG FIISWKSKKQATVSRSSAEAE
Sbjct: 224 GILISPITSFHLKAFVDVDWGSCPDTRRSITGFCIFLGAFIISWKSKKQATVSRSSAEAE 283

Query: 189 YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
           YR LASVTSEL+WI+QLL D +VK LMPTT+FCDNQAVI IASNP FHE
Sbjct: 284 YRALASVTSELMWISQLLKDLQVKILMPTTIFCDNQAVIVIASNPMFHE 332

BLAST of CSPI07G09480 vs. NCBI nr
Match: XP_038879273.1 (uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida])

HSP 1 Score: 345.1 bits (884), Expect = 4.8e-91
Identity = 168/233 (72.10%), Postives = 192/233 (82.40%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LG A+ FLGL+LSRS++G+M+SQRKYCLQILEDTGFL++KP   PMDPNLKL K EGE +
Sbjct: 212 LGHAKDFLGLKLSRSQQGIMISQRKYCLQILEDTGFLEAKPATTPMDPNLKLSKNEGELL 271

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
             +D TCYRRLIGRLIYLQIS PD+CF VHRLSQF+H PTK HL+AAHHLL+YLK  PGQ
Sbjct: 272 KADDITCYRRLIGRLIYLQISRPDICFVVHRLSQFIHSPTKAHLNAAHHLLRYLKRYPGQ 331

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           G+LI PI SFHLKAFVDADWGSC  TRRS+TGFCIFLG  IISWKSKKQ TVSRSSAEAE
Sbjct: 332 GILISPITSFHLKAFVDADWGSCPVTRRSITGFCIFLGASIISWKSKKQVTVSRSSAEAE 391

Query: 189 YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHEGQST 242
           YR LASVTSE +WI+QLL D +VK LMPTTVF   + ++ +     F  GQ+T
Sbjct: 392 YRALASVTSEFIWISQLLKDLQVKILMPTTVFWTIKLLLPLPLIQCFMRGQNT 444

BLAST of CSPI07G09480 vs. NCBI nr
Match: XP_022899321.1 (uncharacterized protein LOC111412620 [Olea europaea var. sylvestris])

HSP 1 Score: 309.7 bits (792), Expect = 2.2e-80
Identity = 146/229 (63.76%), Postives = 177/229 (77.29%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LG  +YFL LE++RS++G+ LSQR+Y LQ+LEDTGFL SKP   PMDP LKL  +EG+ I
Sbjct: 105 LGNLKYFLRLEIARSKKGIFLSQRQYTLQLLEDTGFLASKPAALPMDPKLKLSSYEGDLI 164

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
              DA+ YR+L GRL+YL IS PD+ F VH+LSQF+ +P + HLDAAHHLL+Y+K SPGQ
Sbjct: 165 V--DASMYRKLTGRLLYLTISRPDITFAVHKLSQFVSQPRQPHLDAAHHLLQYIKASPGQ 224

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           G+L     S  L+AF DADWGSC DTR+SV GFC+FLGD +ISWK+KKQ TVSRSSAEAE
Sbjct: 225 GILFSAQSSLQLRAFADADWGSCLDTRKSVAGFCVFLGDSLISWKAKKQTTVSRSSAEAE 284

Query: 189 YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
           YR LAS  SEL W+TQLL DF+  T  PT +FCDNQ  + +ASNP FHE
Sbjct: 285 YRALASTASELTWLTQLLGDFQTSTKDPTVIFCDNQVAVHMASNPIFHE 331

BLAST of CSPI07G09480 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 222.2 bits (565), Expect = 4.4e-58
Identity = 111/229 (48.47%), Postives = 145/229 (63.32%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LG  +YFLGLE++RS  G+ + QRKY L +L++TG L  KP   PMDP++      G   
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
              DA  YRRLIGRL+YLQI+  D+ F V++LSQF   P   H  A   +L Y+KG+ GQ
Sbjct: 373 V--DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQ 432

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           G+         L+ F DA + SC DTRRS  G+C+FLG  +ISWKSKKQ  VS+SSAEAE
Sbjct: 433 GLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAE 492

Query: 189 YRVLASVTSELVWITQLLTDFKVKTLMPTTVFCDNQAVIAIASNPTFHE 238
           YR L+  T E++W+ Q   + ++    PT +FCDN A I IA+N  FHE
Sbjct: 493 YRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHE 539

BLAST of CSPI07G09480 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-39
Identity = 81/193 (41.97%), Postives = 112/193 (58.03%), Query Frame = 0

Query: 9   LGQARYFLGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKFEGEQI 68
           LG   YFLG+++     GL LSQ KY  QIL + G LD KP+  P+   L       +  
Sbjct: 36  LGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY- 95

Query: 69  TEEDATCYRRLIGRLIYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQ 128
              D + +R ++G L YL ++ PD+ + V+ + Q +H+PT    D    +L+Y+KG+   
Sbjct: 96  --PDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFH 155

Query: 129 GVLIKPIDSFHLKAFVDADWGSCFDTRRSVTGFCIFLGDFIISWKSKKQATVSRSSAEAE 188
           G+ I      +++AF D+DW  C  TRRS TGFC FLG  IISW +K+Q TVSRSS E E
Sbjct: 156 GLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETE 215

Query: 189 YRVLASVTSELVW 202
           YR LA   +EL W
Sbjct: 216 YRALALTAAELTW 225

BLAST of CSPI07G09480 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 85.5 bits (210), Expect = 6.4e-17
Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 0

Query: 84  IYLQISSPDLCFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQGVLIKPIDSFHLKAF 143
           +YL I+ PDL F V+RLSQF        + A + +L Y+KG+ GQG+         LKAF
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 144 VDADWGSCFDTRRSVTGFC 163
            D+DW SC DTRRSVTGFC
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94HW26.6e-5143.36Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT946.8e-4843.50Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P925193.8e-3841.97Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
P109781.0e-2732.77Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041462.1e-2531.76Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A5D3DVP41.8e-7559.39Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1C0G91.1e-7258.95uncharacterized protein LOC111006944 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A5A7VQN71.9e-7257.64Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A2N9FI021.2e-7159.83Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... [more]
A0A2N9ERT71.2e-7159.83Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... [more]
Match NameE-valueIdentityDescription
XP_031745923.19.9e-12194.32uncharacterized protein LOC116406346 [Cucumis sativus] >XP_031745939.1 uncharact... [more]
XP_031744313.17.1e-11993.89uncharacterized protein LOC116404977 [Cucumis sativus][more]
XP_038896371.11.4e-10179.48uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida][more]
XP_038879273.14.8e-9172.10uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida][more]
XP_022899321.12.2e-8063.76uncharacterized protein LOC111412620 [Olea europaea var. sylvestris][more]
Match NameE-valueIdentityDescription
AT4G23160.14.4e-5848.47cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.12.7e-3941.97DNA/RNA polymerases superfamily protein [more]
ATMG00240.16.4e-1750.63Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 50..194
NoneNo IPR availablePANTHERPTHR11439:SF335SUBFAMILY NOT NAMEDcoord: 50..194
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 141..237
e-value: 4.85831E-53
score: 166.104
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 10..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G09480.1CSPI07G09480.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process