CSPI07G08730 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G08730
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 6568971 .. 6572150 (-)
RNA-Seq ExpressionCSPI07G08730
SyntenyCSPI07G08730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCACTTGTATGGCTGCTCGGACAACCCCTTCACAAGCAAATTTCCCTTTGTCGCTCGCCCTTTCCATTGTCGATTGAGGTTGCCTATTAGTGATAAAAATAGATACTACATCCGTTTGGTAGTGTTTGAGCCGAACACGGTAGAGAAGGAGGTGAGTTTTTCTTTATAGTTTTCCATTGTTGATGATGAGGTCCCCACTTTTTTCTTTTTTTTTTGATTCATTATCATTATTTTACCAACATATATTTTTTTAATTGGTGTGAATTTGTATTTTGCTATTTTTTTCATGTTTGATTTAGCTGTCTATATTCTATTTGCCCACTCATAGCTTAGCCATTACTTCTAGTATGTGTATGTTGTGAATATTTGTGCACTTTCCATTGCAGTATACTTCAATATATTTTTTCCCTAGCTAGCCTTCGATGTTTCATTCCCTTCATCTATGTAAATACACACCATGTGCATTGTGTGGCAGGTATACTGCATTTAACTTTGACAAAATTTTCTAGTTATCTAACTTTTCTTTTTCCATATGTTATGTGTTGGCTTTTCCATTATCATCAGTCTATGCTCAAATTTGGTTGTTTAGGGGTCTTCAATGCATCATTACTTCTTACATTTCCCAGCCATATATACTTGTTATGCCATTATGCCTTATGTGTGTTTTCTCCTCGGTTCATCTTCATAGAAACTCTTGATTACTCAATTCTTTGGTATGTATATGCATAAATGTGGTTTGTGTTCCATTGTGTGTTTGGTCTTCACAATCTACTTATGTACTTGTCATTGATTGAAGTTGTGATCCATGTTAGGCCACTTGTTGTTTATTTACATGCATTTTCATGTCACCAATTCCATACTACCCGCCTTTTTCCATTATTGTTCTCCATTCCAATAACTTTTATTTCTCCACATTTTCGACTATTGCATATTTGAAGCCCTTGGTCCATTGTTTATGTTCATTTTCATGCCTTTCATAGCACCACATTTGCTACTACTATATTTTTGAGCATTTTTTCCATATTTTTTGTTCATGTGTACGTCTTTCTTATCATCTAGCATTGCATATTGCATATGTGGTGCTATGAAATGTCTTCACATTTGTTCCACTCCATGAAATTCGATTTCAAATTTTGTGCACCTTTTTTTTCCTCCATCCACCAAGTACGTAGGAATATGTATTAAAATAATGTGTTTTTCCAAACTTATTAGATAAATAATGCTGATTGGAAACTAATTACAAAAATAATGCAGTTTTGGAAGAGAGAAGGTCGAGCATTGAACTTTGACCTTTATTTAAAAAAAAAGGAAGGGGGTGAGTTTTGAGTCTTCAAGACTTGCCCTAATTAAATATATATATATATATATATTCGAGTCATTTTGCGCAATAGCAGGAAAAACATGTATGGTCAAATCACTTCTTTCCCATGAAGCTTTTCTGTGGGTAGGTTGAGTATTTAAAGCTCCACTTAATTATATATATATATTTATATTATGGCCATTATGCGTAACGACAAGAAGAGTAGACATTCATGCATGGTCAAATCGTTTTTTTCTTGTGAAGAAGGGCGAGTACTCTCTCTTCTCTTTTATATCCTTCCTCTTCATTCTCATCTTACCTCTTGGCCATTCTTCTCCCATTCAGATCATCTTTCACAAAATACTCTCAGCTCTTCTTCTTTAATTCCCATCTTTCACAAATCCTCTCATCCTTCAAATTACCTCTCAATTTTCCTTCCCATTTTCCCTCCAATCCCCATCATATTTTCATCCTTAATATTTAAATCAGGACGTTGGCTGCTCCTCGTTGCAATCAGTCTCAATAGCTTGGCAACTCAACTGGAGAATTGAAAAATGATTAAGAGAGTCGAGTTGTTACATTTTTACCTTTTATTCTTATTTTATTATGATTTTTTGTTTTTTTTATTTGATTCATATCGAGTGTTCGTATTTTTTTATTGGTACATTTTTTAAATATGTCATCATGCATTTTACACACACTCACAAGTCCTCTACTCAGGCTACAACTTTATAGTATTAGGATTGAGGAATGAGTAGTGTTAACCTTCAAGAGATTTCGACTTCCGTGTAGGCACAAGAAAAATGTTCGTTCAGATTAATTCTTTTGTTATTTCTTAAATTAACATTAGAACAAGTTTGAGGGTCTTTCCCTTCTAGAAGTTTAGATGATACAAGACCGTAACATTTTCTATTTGGCATATTTTATCTAAAAGTCAAACGGTCAAAATTATTATTGTTTTTTTTTAAACAAAGTTACATGTTTCTAAAATTTGAAATCATACCATATTTCCTTTATTTTTTTTTAAAAAAGGGGTTAAATCACAATATTTTTTACATTATTTTTTTTAAGGAAAGTTTGATTTTAGTTAATATTTATCTTAGTTTCCTTGAAATTGGTTCTTTGGCTTCGATCATATATAGTTAGGGTAGTATTTACCTTGTAGAAGCACGTGAAAAACGGTAACATCCCAAAACTATTAAGATAATTTTTAATTTTATTTTGTTGAAATTGGGTATTAATTGAGATTTGATGTTAGATGAGTTAAGTATTTAAGGAAGAATTGTTAATTATTTGAGAGTTTTGGTTATTAGTTGTTAATTATGCAATTAATTTTCGAAAGAGAAAAAAAAAAATATTTAAGGATAATATAATTATTAAAATGTTATATCGTGATTTTGGTGGAATAAAAAGAGGAAAAGTTGTTTTAATGGGTAATTAAGGTGGAGTGAGCTTTATTTCGAAACGTAAAAAGTGAAAGAAAAATTAATTAAAAGATATAATAATGATATTTATTATTATCATTATTAATAATATTATCATTATTAAATAAGCCTTCTCTCGTTTTACGTGCATCATCTTCTCCACCACATTGATTCTCCTTCACCATTCAACCTTAGTCGCCGCCGCATTGTGCGTCAGGTCACCACCGTTGCGCAATCATCGTCGGGGACACAACTCGCAGCCAGTCATCACTCGTTAGTCGAGATCTACTCGTTGGTTGCCAAATCGAGCATCTCTCATTGTCTTCATAATCACTTGAAACCGGCTGCCCCTCCTTCGTCGAAATTGTCGTCGGCCGTAACCCTCTCCTCCGTCGAAACCATCATGGGTCGTAGCCTCCACTTGCACAGTGTCGCTGGCCATCGTTGCGCT

mRNA sequence

ATGACCCACTTGTATGGCTGCTCGGACAACCCCTTCACAAGCAAATTTCCCTTTGTCGCTCGCCCTTTCCATTGTCGATTGAGGTTGCCTATTAGTGATAAAAATAGATACTACATCCGTTTGGTAGTGTTTGAGCCGAACACGGTAGAGAAGGAGGTCACCACCGTTGCGCAATCATCGTCGGGGACACAACTCGCAGCCAGTCATCACTCGTTAGTCGAGATCTACTCGTTGGTTGCCAAATCGAGCATCTCTCATTGTCTTCATAATCACTTGAAACCGGCTGCCCCTCCTTCGTCGAAATTGTCGTCGGCCGTAACCCTCTCCTCCGTCGAAACCATCATGGGTCGTAGCCTCCACTTGCACAGTGTCGCTGGCCATCGTTGCGCT

Coding sequence (CDS)

ATGACCCACTTGTATGGCTGCTCGGACAACCCCTTCACAAGCAAATTTCCCTTTGTCGCTCGCCCTTTCCATTGTCGATTGAGGTTGCCTATTAGTGATAAAAATAGATACTACATCCGTTTGGTAGTGTTTGAGCCGAACACGGTAGAGAAGGAGGTCACCACCGTTGCGCAATCATCGTCGGGGACACAACTCGCAGCCAGTCATCACTCGTTAGTCGAGATCTACTCGTTGGTTGCCAAATCGAGCATCTCTCATTGTCTTCATAATCACTTGAAACCGGCTGCCCCTCCTTCGTCGAAATTGTCGTCGGCCGTAACCCTCTCCTCCGTCGAAACCATCATGGGTCGTAGCCTCCACTTGCACAGTGTCGCTGGCCATCGTTGCGCT

Protein sequence

MTHLYGCSDNPFTSKFPFVARPFHCRLRLPISDKNRYYIRLVVFEPNTVEKEVTTVAQSSSGTQLAASHHSLVEIYSLVAKSSISHCLHNHLKPAAPPSSKLSSAVTLSSVETIMGRSLHLHSVAGHRCA
Homology
[Close]
BLAST of CSPI07G08730 vs. NCBI nr
Match: KAE8645969.1 (hypothetical protein Csa_015496, partial [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-22
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0 

Query: 1  MTHLYGCSDNPFTSKFPFVARPFHCRLRLPISDKNRYYIRLVVFEPNTVEKEVTTV 57
          MTHLYGCSDNPFTSKFPFVARPFHCRLRLPISDKNRYYIRLVVFEPNTVEKE  +V
Sbjct: 1  MTHLYGCSDNPFTSKFPFVARPFHCRLRLPISDKNRYYIRLVVFEPNTVEKEGDSV 56

[Close]
BLAST of CSPI07G08730 vs. NCBI nr
Match: XP_031744530.1 (uncharacterized protein LOC101207447 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-22
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0 

Query: 1  MTHLYGCSDNPFTSKFPFVARPFHCRLRLPISDKNRYYIRLVVFEPNTVEKEVTTV 57
          MTHLYGCSDNPFTSKFPFVARPFHCRLRLPISDKNRYYIRLVVFEPNTVEKE  +V
Sbjct: 1  MTHLYGCSDNPFTSKFPFVARPFHCRLRLPISDKNRYYIRLVVFEPNTVEKEGDSV 56

The following BLAST results are available for this feature:
BLAST of CSPI07G08730 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G08730 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G08730 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645969.11.5e-2294.64hypothetical protein Csa_015496, partial [Cucumis sativus][more]
XP_031744530.11.5e-2294.64uncharacterized protein LOC101207447 [Cucumis sativus][more]
BLAST of CSPI07G08730 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G08730.1CSPI07G08730.1mRNA