CSPI07G08560 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G08560
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ATP-dependent zinc metalloprotease FtsH
Location	Chr7: 6391329 .. 6392720 (-)
RNA-Seq Expression	CSPI07G08560
Synteny	CSPI07G08560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTGAACCAATTCAAACAGTATATCCTGGAGAGGATGAATACGATTTGAGAGGACCAACAGGAACACAAATTGTAGTGTACGAAGAACGGAAAGATGAACCTGATGTAGTATTTGAAACGTCTAAAACAAAATGCATATGCATGAAGGACAAGATAATTTATTTGTGAGTATATTATATATATAATGTAGTATATATTATAAGATGTGAGTTAATGGTTATATTACATTGTTTTAAAGATGAATGATGGAGATTGAGCTTCGGACGTACATTCCAAAGATATGTTAGAGTCTGATGAGGTATACTTATGTTTAGTATTGAAGATACTTGAAAACAATTATAAGGTTATATGTATATTTTATTGTGCAGGACAATATACCCATTGCAAAAAGGCGTTTGTTCAAAGATAAGTCGAGTAAAGAAAAGAAAAAAGAATCTGAAATGGTATGTGTGTTAATGTATTTTTCTAAAAATAAATTTTACAGAAATATAATGTATATTTGATAATATGAAATGTAGGTATCAAGGAAGAGAAAGAGAGTTGGAAATGTGAAAAATAAAAGAAGATAATAAGAAAAAACAAAGTGAAAAGAAAAAGATGGTGAAAGAAGAAATGTCTAAAAGAACAAAGGTATATAAGCTTAGATGGTTTGCCTCATTGGCTAATCTTTGTCCAGGTTTTGGTGAAAGTTGGGGTTTTCTCAGTAGTAGTTTGAAAATGAAAAATTGACTCAGCGTAGCTGTTTCAAATAACTATGTACGTAGTTTAAGTGCAGAGTGTCACTTGTCTGTTGTTTCTAAAGTCGGTTATCTATGTTGTCTATATGCAGGTAAACAAACCTTCAGTTATCTTCATTGATGAAATTGATGCCTTGGCAACTAGGTATTCAGGACATTGAACTTCTTTGTTTTATTTTAGTTAATAGATTACATTTAATATATCACACTATATGACATGTTATCTTGTGCAATGGCCAGTGTCTATCATTTGGGCTTGGGGTTCACGCCCCCATGTTGAGAACTTTATAACTTGGTTGAAATCTCTCTAAAAGTTAGTGGGGTCTCAACATCCCATATTATTGGATATTAGATTCCATTTATTCTGTTAATTTATTTTCATGTCTTTTCTTTTAAGCAACAACCAAAAGACCAGAATAACTATTTTCATCTATATTCATTCTTATAAATACTATCATGTCTCAGGCGTCAGGGAATTTTCAAGGAATCTACAGATAATCTCTACAATGCCTCTACCCAAGAGAGGGAAACCACATTGAACCAACTTCTTACAGAGCTTGATGGATTTGATACTGGAAAGGGTGTTATATTTTTAGCTGCCACGAATAGAAGAGATCTGTTAGATCCTGCGCTTCTTTTAACTCTTTAA

mRNA sequence

ATGGATTTTGAACCAATTCAAACAGTATATCCTGGAGAGGATGAATACGATTTGAGAGGACCAACAGGAACACAAATTGTAGTGTACGAAGAACGGAAAGATGAACCTGATGTAGACAATATACCCATTGCAAAAAGGCGTTTGTTCAAAGATAAGTCGAGTAAAGAAAAGAAAAAAGAATCTGAAATGGTAAACAAACCTTCAGTTATCTTCATTGATGAAATTGATGCCTTGGCAACTAGGCGTCAGGGAATTTTCAAGGAATCTACAGATAATCTCTACAATGCCTCTACCCAAGAGAGGGAAACCACATTGAACCAACTTCTTACAGAGCTTGATGGATTTGATACTGGAAAGGGTGTTATATTTTTAGCTGCCACGAATAGAAGAGATCTGTTAGATCCTGCGCTTCTTTTAACTCTTTAA

Coding sequence (CDS)

ATGGATTTTGAACCAATTCAAACAGTATATCCTGGAGAGGATGAATACGATTTGAGAGGACCAACAGGAACACAAATTGTAGTGTACGAAGAACGGAAAGATGAACCTGATGTAGACAATATACCCATTGCAAAAAGGCGTTTGTTCAAAGATAAGTCGAGTAAAGAAAAGAAAAAAGAATCTGAAATGGTAAACAAACCTTCAGTTATCTTCATTGATGAAATTGATGCCTTGGCAACTAGGCGTCAGGGAATTTTCAAGGAATCTACAGATAATCTCTACAATGCCTCTACCCAAGAGAGGGAAACCACATTGAACCAACTTCTTACAGAGCTTGATGGATTTGATACTGGAAAGGGTGTTATATTTTTAGCTGCCACGAATAGAAGAGATCTGTTAGATCCTGCGCTTCTTTTAACTCTTTAA

Protein sequence

MDFEPIQTVYPGEDEYDLRGPTGTQIVVYEERKDEPDVDNIPIAKRRLFKDKSSKEKKKESEMVNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIFLAATNRRDLLDPALLLTL*

Homology

[Close]

BLAST of CSPI07G08560 vs. ExPASy Swiss-Prot
Match: O22993 (Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI1 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.9e-32
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKE++D LYNA+TQERETTLNQLL ELDGFDTGKGVIF
Sbjct: 520 VNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIF 579

Query: 124 LAATNRRDLLDPALL 139
           L ATNRRDLLDPALL
Sbjct: 580 LGATNRRDLLDPALL 594

[Close]

BLAST of CSPI07G08560 vs. ExPASy Swiss-Prot
Match: Q6H6R9 (ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=FTSH7 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.6e-15
Identity = 47/80 (58.75%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 58  KKESEMVNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDT 117
           KKES     PS+IFIDEIDA+A  R G ++         S  ERE TLNQLLTE+DGFDT
Sbjct: 435 KKES-----PSIIFIDEIDAVAKSRDGRYR-------IVSNDEREQTLNQLLTEMDGFDT 494

Query: 118 GKGVIFLAATNRRDLLDPAL 138
              VI L ATNR D+LDPAL
Sbjct: 495 NSAVIVLGATNRADVLDPAL 502

[Close]

BLAST of CSPI07G08560 vs. ExPASy Swiss-Prot
Match: Q9SD67 (ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSH7 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-14
Identity = 43/71 (60.56%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 67  PSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIFLAA 126
           PS+IFIDEIDA+A  R G F+         S  ERE TLNQLLTE+DGFD+   VI L A
Sbjct: 418 PSIIFIDEIDAVAKSRDGKFR-------MGSNDEREQTLNQLLTEMDGFDSNSAVIVLGA 477

Query: 127 TNRRDLLDPAL 138
           TNR D+LDPAL
Sbjct: 478 TNRADVLDPAL 481

[Close]

BLAST of CSPI07G08560 vs. ExPASy Swiss-Prot
Match: Q9FIM2 (ATP-dependent zinc metalloprotease FTSH 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSH9 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-14
Identity = 43/71 (60.56%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 67  PSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIFLAA 126
           PS+IFIDEIDA+A  R G F+         S  ERE TLNQLLTE+DGFD+   VI L A
Sbjct: 422 PSIIFIDEIDAVAKSRDGKFR-------MVSNDEREQTLNQLLTEMDGFDSSSAVIVLGA 481

Query: 127 TNRRDLLDPAL 138
           TNR D+LDPAL
Sbjct: 482 TNRADVLDPAL 485

[Close]

BLAST of CSPI07G08560 vs. ExPASy Swiss-Prot
Match: P85190 (ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment) OS=Helianthus annuus OX=4232 GN=FTSH PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14
Identity = 43/71 (60.56%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 67  PSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIFLAA 126
           PS+IFIDEIDA+A  R G F+         S  ERE TLNQLLTE+DGFD+   VI L A
Sbjct: 47  PSIIFIDEIDAVAKSRDGRFR-------IVSNDEREQTLNQLLTEMDGFDSNSAVIVLGA 106

Query: 127 TNRRDLLDPAL 138
           TNR D+LDPAL
Sbjct: 107 TNRADVLDPAL 110

[Close]

BLAST of CSPI07G08560 vs. ExPASy TrEMBL
Match: A0A0A0K560 (Cell division protein ftsH OS=Cucumis sativus OX=3659 GN=Csa_7G154990 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.7e-70
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MDFEPIQTVYPGEDEYDLRGPTGTQIVVYEERKDEPDVDNIPIAKRRLFKDKSSKEKKKE 60
           MDFEPIQTVYPGEDEYDLRGPTGTQIVVY+ERKDEPDVDNIPIAKRRLFKDKSSKEKKKE
Sbjct: 1   MDFEPIQTVYPGEDEYDLRGPTGTQIVVYKERKDEPDVDNIPIAKRRLFKDKSSKEKKKE 60

Query: 61  SEMVNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKG 120
           SEMVNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKG
Sbjct: 61  SEMVNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKG 120

Query: 121 VIFLAATNRRDLLDPALLLTL 142
           VIFLAATNRRDLLDPALLLTL
Sbjct: 121 VIFLAATNRRDLLDPALLLTL 141

[Close]

BLAST of CSPI07G08560 vs. ExPASy TrEMBL
Match: A0A0A0KYF2 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052670 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.5e-32
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF
Sbjct: 531 VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 590

Query: 124 LAATNRRDLLDPALL 139
           LAATNRRDLLDPALL
Sbjct: 591 LAATNRRDLLDPALL 605

[Close]

BLAST of CSPI07G08560 vs. ExPASy TrEMBL
Match: A0A5D3CXC4 (Putative inactive ATP-dependent zinc metalloprotease FTSHI 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003650 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 6.0e-31
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKESTDNLYNA+TQERETTLNQLL ELDGFDTG+GVIF
Sbjct: 531 VNKPSVIFIDEIDALATRRQGIFKESTDNLYNAATQERETTLNQLLIELDGFDTGRGVIF 590

Query: 124 LAATNRRDLLDPALL 139
           LAATNRRDLLDPALL
Sbjct: 591 LAATNRRDLLDPALL 605

[Close]

BLAST of CSPI07G08560 vs. ExPASy TrEMBL
Match: A0A1S4DYV7 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107991187 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 6.0e-31
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKESTDNLYNA+TQERETTLNQLL ELDGFDTG+GVIF
Sbjct: 434 VNKPSVIFIDEIDALATRRQGIFKESTDNLYNAATQERETTLNQLLIELDGFDTGRGVIF 493

Query: 124 LAATNRRDLLDPALL 139
           LAATNRRDLLDPALL
Sbjct: 494 LAATNRRDLLDPALL 508

[Close]

BLAST of CSPI07G08560 vs. ExPASy TrEMBL
Match: A0A6J1B8A4 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Herrania umbratica OX=108875 GN=LOC110425161 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.0e-30
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKESTD+LYNA+TQERETTLNQLL ELDGFDTGKGVIF
Sbjct: 525 VNKPSVIFIDEIDALATRRQGIFKESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIF 584

Query: 124 LAATNRRDLLDPALL 139
           LAATNRRDLLDPALL
Sbjct: 585 LAATNRRDLLDPALL 599

[Close]

BLAST of CSPI07G08560 vs. NCBI nr
Match: XP_011653221.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Cucumis sativus] >KGN53417.1 hypothetical protein Csa_015197 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 5.1e-32
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF
Sbjct: 531 VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 590

Query: 124 LAATNRRDLLDPALL 139
           LAATNRRDLLDPALL
Sbjct: 591 LAATNRRDLLDPALL 605

[Close]

BLAST of CSPI07G08560 vs. NCBI nr
Match: XP_016901157.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic, partial [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKESTDNLYNA+TQERETTLNQLL ELDGFDTG+GVIF
Sbjct: 434 VNKPSVIFIDEIDALATRRQGIFKESTDNLYNAATQERETTLNQLLIELDGFDTGRGVIF 493

Query: 124 LAATNRRDLLDPALL 139
           LAATNRRDLLDPALL
Sbjct: 494 LAATNRRDLLDPALL 508

[Close]

BLAST of CSPI07G08560 vs. NCBI nr
Match: KAA0044923.1 (putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. makuwa] >TYK16547.1 putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKESTDNLYNA+TQERETTLNQLL ELDGFDTG+GVIF
Sbjct: 531 VNKPSVIFIDEIDALATRRQGIFKESTDNLYNAATQERETTLNQLLIELDGFDTGRGVIF 590

Query: 124 LAATNRRDLLDPALL 139
           LAATNRRDLLDPALL
Sbjct: 591 LAATNRRDLLDPALL 605

[Close]

BLAST of CSPI07G08560 vs. NCBI nr
Match: XP_002509985.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Ricinus communis] >EEF51372.1 Cell division protein ftsH, putative [Ricinus communis])

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-30
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKESTD+LYNA+TQERETTLNQLL ELDGFDTGKGVIF
Sbjct: 505 VNKPSVIFIDEIDALATRRQGIFKESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIF 564

Query: 124 LAATNRRDLLDPALL 139
           LAATNRRDLLDPALL
Sbjct: 565 LAATNRRDLLDPALL 579

[Close]

BLAST of CSPI07G08560 vs. NCBI nr
Match: KAF9865773.1 (hypothetical protein H0E87_025023 [Populus deltoides])

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-30
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKESTD+LYNA+TQERETTLNQLL ELDGFDTGKGVIF
Sbjct: 509 VNKPSVIFIDEIDALATRRQGIFKESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIF 568

Query: 124 LAATNRRDLLDPALL 139
           LAATNRRDLLDPALL
Sbjct: 569 LAATNRRDLLDPALL 583

[Close]

BLAST of CSPI07G08560 vs. TAIR 10
Match: AT4G23940.1 (FtsH extracellular protease family )

HSP 1 Score: 138.3 bits (347), Expect = 4.9e-33
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 64  VNKPSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIF 123
           VNKPSVIFIDEIDALATRRQGIFKE++D LYNA+TQERETTLNQLL ELDGFDTGKGVIF
Sbjct: 520 VNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIF 579

Query: 124 LAATNRRDLLDPALL 139
           L ATNRRDLLDPALL
Sbjct: 580 LGATNRRDLLDPALL 594

[Close]

BLAST of CSPI07G08560 vs. TAIR 10
Match: AT3G47060.1 (FTSH protease 7 )

HSP 1 Score: 81.3 bits (199), Expect = 7.1e-16
Identity = 43/71 (60.56%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 67  PSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIFLAA 126
           PS+IFIDEIDA+A  R G F+         S  ERE TLNQLLTE+DGFD+   VI L A
Sbjct: 418 PSIIFIDEIDAVAKSRDGKFR-------MGSNDEREQTLNQLLTEMDGFDSNSAVIVLGA 477

Query: 127 TNRRDLLDPAL 138
           TNR D+LDPAL
Sbjct: 478 TNRADVLDPAL 481

[Close]

BLAST of CSPI07G08560 vs. TAIR 10
Match: AT5G58870.1 (FTSH protease 9 )

HSP 1 Score: 81.3 bits (199), Expect = 7.1e-16
Identity = 43/71 (60.56%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 67  PSVIFIDEIDALATRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIFLAA 126
           PS+IFIDEIDA+A  R G F+         S  ERE TLNQLLTE+DGFD+   VI L A
Sbjct: 422 PSIIFIDEIDAVAKSRDGKFR-------MVSNDEREQTLNQLLTEMDGFDSSSAVIVLGA 481

Query: 127 TNRRDLLDPAL 138
           TNR D+LDPAL
Sbjct: 482 TNRADVLDPAL 485

[Close]

BLAST of CSPI07G08560 vs. TAIR 10
Match: AT1G07510.1 (FTSH protease 10 )

HSP 1 Score: 71.6 bits (174), Expect = 5.6e-13
Identity = 41/73 (56.16%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 67  PSVIFIDEIDALA-TRRQGIFKESTDNLYNASTQERETTLNQLLTELDGFDTGKGVIFLA 126
           PS+IFIDEIDA+   R +G F    D        ERE+TLNQLL E+DGF T  GV+ LA
Sbjct: 420 PSIIFIDEIDAIGRARGRGGFSGGND--------ERESTLNQLLVEMDGFGTTAGVVVLA 479

Query: 127 ATNRRDLLDPALL 139
            TNR D+LD ALL
Sbjct: 480 GTNRPDILDKALL 484

[Close]

BLAST of CSPI07G08560 vs. TAIR 10
Match: AT1G06430.1 (FTSH protease 8 )

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 42/82 (51.22%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 58  KKESEMVNKPSVIFIDEIDALATRR-QGIFKESTDNLYNASTQERETTLNQLLTELDGFD 117
           KK  E  N P ++F+DEIDA+  +R  GI              ERE TLNQLLTE+DGF+
Sbjct: 306 KKAKE--NAPCIVFVDEIDAVGRQRGTGI---------GGGNDEREQTLNQLLTEMDGFE 365

Query: 118 TGKGVIFLAATNRRDLLDPALL 139
              GVI +AATNR D+LD ALL
Sbjct: 366 GNTGVIVVAATNRADILDSALL 376

The following BLAST results are available for this feature:

BLAST of CSPI07G08560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22993	6.9e-32	92.00	Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=A...	[more]
Q6H6R9	7.6e-15	58.75	ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Oryza sativa subsp. ...	[more]
Q9SD67	1.0e-14	60.56	ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Arabidopsis thaliana...	[more]
Q9FIM2	1.0e-14	60.56	ATP-dependent zinc metalloprotease FTSH 9, chloroplastic OS=Arabidopsis thaliana...	[more]
P85190	1.3e-14	60.56	ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment) OS=Helianthus ...	[more]

BLAST of CSPI07G08560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K560	1.7e-70	99.29	Cell division protein ftsH OS=Cucumis sativus OX=3659 GN=Csa_7G154990 PE=4 SV=1	[more]
A0A0A0KYF2	2.5e-32	100.00	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052670 PE=4 SV...	[more]
A0A5D3CXC4	6.0e-31	96.00	Putative inactive ATP-dependent zinc metalloprotease FTSHI 1 OS=Cucumis melo var...	[more]
A0A1S4DYV7	6.0e-31	96.00	probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=C...	[more]
A0A6J1B8A4	1.0e-30	96.00	probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=H...	[more]

BLAST of CSPI07G08560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653221.1	5.1e-32	100.00	probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Cuc...	[more]
XP_016901157.1	1.2e-30	96.00	PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chlorop...	[more]
KAA0044923.1	1.2e-30	96.00	putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. ...	[more]
XP_002509985.1	2.1e-30	96.00	probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Ric...	[more]
KAF9865773.1	2.1e-30	96.00	hypothetical protein H0E87_025023 [Populus deltoides]	[more]

BLAST of CSPI07G08560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23940.1	4.9e-33	92.00	FtsH extracellular protease family	[more]
AT3G47060.1	7.1e-16	60.56	FTSH protease 7	[more]
AT5G58870.1	7.1e-16	60.56	FTSH protease 9	[more]
AT1G07510.1	5.6e-13	56.16	FTSH protease 10	[more]
AT1G06430.1	1.3e-12	51.22	FTSH protease 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 58..138 e-value: 3.3E-17 score: 63.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..140 e-value: 1.7E-19 score: 71.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 62..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR23076	METALLOPROTEASE M41 FTSH	coord: 18..138
None	No IPR available	PANTHER	PTHR23076:SF111	INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 1, CHLOROPLASTIC-RELATED	coord: 18..138
None	No IPR available	CDD	cd00009	AAA	coord: 18..131 e-value: 1.62828E-4 score: 37.5107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G08560.1	CSPI07G08560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0004222	metalloendopeptidase activity