CSPI07G08180 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G08180
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 5893143 .. 5893515 (+)
RNA-Seq ExpressionCSPI07G08180
SyntenyCSPI07G08180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCTTTATGTCATTCGAAGCCCAGTCGTTGTTCGTTGCACGCAAAGCCCGTCGAGGAGTATGAGCCTGTCTTCTTCCAGATCACGCGCTGGTGTTCTCTCTGTCAAGCCAGCGTTCCTCCGTCCACCACAAGCTTCCTGTCAGTCACCTAAAGACATGGCCTCCACATCGTATCGTCCGGGTCTAAATCAAGCGGTCAGTTGCAGTTTCGAGTTCCCTTTGGAGAGTCTTCTTCAAATTTAAGCCACACACGTGAGTTCCCTTTCCCAACCAGACGCACGCATCTGCCTTCTTCCTCACCAAGTCGTGCAGCCACATTCGAGTTGTCCTAGATCTGAGTCGATCTGTCTATGTTAGTCGAGCCGAGTGA

mRNA sequence

ATGCCTCTTTATGTCATTCGAAGCCCAGTCGTTGTTCGTTGCACGCAAAGCCCGTCGAGGAGTATGAGCCTGTCTTCTTCCAGATCACGCGCTGGTGTTCTCTCTGTCAAGCCAGCGTTCCTCCGTCCACCACAAGCTTCCTGTCAGTCACCTAAAGACATGGCCTCCACATCGTATCGTCCGGGTCTAAATCAAGCGACGCACGCATCTGCCTTCTTCCTCACCAAGTCGTGCAGCCACATTCGAGTTGTCCTAGATCTGAGTCGATCTGTCTATGTTAGTCGAGCCGAGTGA

Coding sequence (CDS)

ATGCCTCTTTATGTCATTCGAAGCCCAGTCGTTGTTCGTTGCACGCAAAGCCCGTCGAGGAGTATGAGCCTGTCTTCTTCCAGATCACGCGCTGGTGTTCTCTCTGTCAAGCCAGCGTTCCTCCGTCCACCACAAGCTTCCTGTCAGTCACCTAAAGACATGGCCTCCACATCGTATCGTCCGGGTCTAAATCAAGCGACGCACGCATCTGCCTTCTTCCTCACCAAGTCGTGCAGCCACATTCGAGTTGTCCTAGATCTGAGTCGATCTGTCTATGTTAGTCGAGCCGAGTGA

Protein sequence

MPLYVIRSPVVVRCTQSPSRSMSLSSSRSRAGVLSVKPAFLRPPQASCQSPKDMASTSYRPGLNQATHASAFFLTKSCSHIRVVLDLSRSVYVSRAE*
Homology
[Close]
BLAST of CSPI07G08180 vs. ExPASy TrEMBL
Match: A0A0A0K6X2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G104790 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.5e-44
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1   MPLYVIRSPVVVRCTQSPSRSMSLSSSRSRAGVLSVKPAFLRPPQASCQSPKDMASTSYR 60
           MPLYVIRSPVVVRCTQSPSRSMSLSSSRSRAGVLSVKPAFLRPPQASCQSPKDMASTSYR
Sbjct: 40  MPLYVIRSPVVVRCTQSPSRSMSLSSSRSRAGVLSVKPAFLRPPQASCQSPKDMASTSYR 99

Query: 61  PGLNQATHASAFFLTKSCSHIRVVLDLSRSVYVSRAE 98
           PGLNQATHASAFFLTKSCSHIRVVLDLSRSVYVSRAE
Sbjct: 100 PGLNQATHASAFFLTKSCSHIRVVLDLSRSVYVSRAE 136

[Close]
BLAST of CSPI07G08180 vs. NCBI nr
Match: KAE8645894.1 (hypothetical protein Csa_011866, partial [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 2.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MPLYVIRSPVVVRCTQSPSRSMSLSSSRSRAGVLSVKPAFLRPPQASCQSPKDMASTSYR 60
          MPLYVIRSPVVVRCTQSPSRSMSLSSSRSRAGVLSVKPAFLRPPQASCQSPKDMASTSYR
Sbjct: 27 MPLYVIRSPVVVRCTQSPSRSMSLSSSRSRAGVLSVKPAFLRPPQASCQSPKDMASTSYR 86

Query: 61 PGLNQA 67
          PGLNQA
Sbjct: 87 PGLNQA 92

The following BLAST results are available for this feature:
BLAST of CSPI07G08180 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G08180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6X22.5e-44100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G104790 PE=4 SV=1[more]
BLAST of CSPI07G08180 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645894.12.9e-26100.00hypothetical protein Csa_011866, partial [Cucumis sativus][more]
BLAST of CSPI07G08180 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G08180.1CSPI07G08180.1mRNA