CSPI07G07990 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G07990
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Cytochrome b6-f complex subunit 7
Location	Chr7: 5683370 .. 5684939 (+)
RNA-Seq Expression	CSPI07G07990
Synteny	CSPI07G07990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAAATACAACAAACACCATATTGATATCAATATCATCATTTTGATTTTGATTTTGATGGGGCTAGTATCCAAAGATATTGAGAAATCTTTAGCAATTCTAATCTGTTTATGAACCACCCAAATTCCTCTTACCTTATCCATTCTTTCTCCATACAAACACTCTTTTCCCCACCCCCACTCCCCCCATCCATTTCTCATCTCATCACTTTCAATTTTCTCTTCCACTCAGGTTCAATCCCTTCCCTTTTTCTCCCTCAAAATCCCCTTTTCCCATCTCAGTTTTCACTCAATATTGACTCTTCCTTCTCTCTTCCTCTTCTTTCAGGCACCATTCCAATGGCTACAGCCTCCGCTACCCTCTCGACGGCCATGTCCTCCGCCGCCCCCATCTCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGCCCATTTTATTTCTGGGCTTAACTCCTTTAGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGCCTGGTTCTTATTGGTGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGAAAAGCTACCAAAAATGGTTGATGATGATGAGGATATTGGTCGGTTATCTGAAATTTGTAAGTTAATCTACTTTTACCAGTTATTGTAGAACTCAATTGTTTCCATCAGTCAAAACAATTGACAAAATTCATTTTCCCTATTTCTTTCCCCTGCTTTCTCATTACAAAATAATGGCATTGTAGTATATTGTTCATCTGCTTGAAAAAAGATGCATATTCTTGTAAATTCTTTTTGTGCTGCTTGGATCATGAGAAGAATAAGAAATGAACTTTCCAGGCAATTATTGTAAGATCAACTAGTTCTTTGCGGAGACTGCCAAAACAAAAAATAAAAAACAATAAAAATATGGTTATCAAACGGAGGTTAAGTTAATGTGTTTTTTAATTCACTGTTAATATGTTTTGAAACAACTTTGTCTTAAGTAAACTGAAAGAAAAAGGGAACAAATTGTAAGAAAATGTATCCACATACAATCCATTTCACGCAGTTACTGTTTTGGTAGTAGAAAGTTGGATCGTAAACAATCTCATAAACCAAGCAACCAGCATCTCAAATTGGTGTAAAGAACTTGAATGTTAGTTAGTAGGTTTTTGAACGAAGATTTGTATGAAACTTAGACAGGAGACTGAAATCAAGAATTGTACTTTTGTGTATAGAGTTCAATTTCACTGGAGTAAGCTTTCATGTTTACTCTCAAATAAAGGTTGTCTTGTTGATTATACAAAGCCTAGCGTACATGAAATAGATTCCTGCAATATATGGCTTGAAATTGAACCTTGCTTGATGAACTTATTACTAAGAAGTAAGAGTTGAGGAACATTTTGAATCAACTTAGCTTGACTCAGAGGGAAAGA

mRNA sequence

TGTAAATACAACAAACACCATATTGATATCAATATCATCATTTTGATTTTGATTTTGATGGGGCTAGTATCCAAAGATATTGAGAAATCTTTAGCAATTCTAATCTGTTTATGAACCACCCAAATTCCTCTTACCTTATCCATTCTTTCTCCATACAAACACTCTTTTCCCCACCCCCACTCCCCCCATCCATTTCTCATCTCATCACTTTCAATTTTCTCTTCCACTCAGGTTCAATCCCTTCCCTTTTTCTCCCTCAAAATCCCCTTTTCCCATCTCAGTTTTCACTCAATATTGACTCTTCCTTCTCTCTTCCTCTTCTTTCAGGCACCATTCCAATGGCTACAGCCTCCGCTACCCTCTCGACGGCCATGTCCTCCGCCGCCCCCATCTCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGCCCATTTTATTTCTGGGCTTAACTCCTTTAGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGCCTGGTTCTTATTGGTGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGAAAAGCTACCAAAAATGGTTGATGATGATGAGGATATTGGTCGGTTATCTGAAATTTGTAAGTTAATCTACTTTTACCAGTTATTGTAGAACTCAATTGTTTCCATCAGTCAAAACAATTGACAAAATTCATTTTCCCTATTTCTTTCCCCTGCTTTCTCATTACAAAATAATGGCATTGTAGTATATTGTTCATCTGCTTGAAAAAAGATGCATATTCTTGTAAATTCTTTTTGTGCTGCTTGGATCATGAGAAGAATAAGAAATGAACTTTCCAGGCAATTATTGTAAGATCAACTAGTTCTTTGCGGAGACTGCCAAAACAAAAAATAAAAAACAATAAAAATATGGTTATCAAACGGAGGTTAAGTTAATGTGTTTTTTAATTCACTGTTAATATGTTTTGAAACAACTTTGTCTTAAGTAAACTGAAAGAAAAAGGGAACAAATTGTAAGAAAATGTATCCACATACAATCCATTTCACGCAGTTACTGTTTTGGTAGTAGAAAGTTGGATCGTAAACAATCTCATAAACCAAGCAACCAGCATCTCAAATTGGTGTAAAGAACTTGAATGTTAGTTAGTAGGTTTTTGAACGAAGATTTGTATGAAACTTAGACAGGAGACTGAAATCAAGAATTGTACTTTTGTGTATAGAGTTCAATTTCACTGGAGTAAGCTTTCATGTTTACTCTCAAATAAAGGTTGTCTTGTTGATTATACAAAGCCTAGCGTACATGAAATAGATTCCTGCAATATATGGCTTGAAATTGAACCTTGCTTGATGAACTTATTACTAAGAAGTAAGAGTTGAGGAACATTTTGAATCAACTTAGCTTGACTCAGAGGGAAAGA

Coding sequence (CDS)

ATGAACCACCCAAATTCCTCTTACCTTATCCATTCTTTCTCCATACAAACACTCTTTTCCCCACCCCCACTCCCCCCATCCATTTCTCATCTCATCACTTTCAATTTTCTCTTCCACTCAGGTTCAATCCCTTCCCTTTTTCTCCCTCAAAATCCCCTTTTCCCATCTCAGTTTTCACTCAATATTGACTCTTCCTTCTCTCTTCCTCTTCTTTCAGGCACCATTCCAATGGCTACAGCCTCCGCTACCCTCTCGACGGCCATGTCCTCCGCCGCCCCCATCTCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGCCCATTTTATTTCTGGGCTTAACTCCTTTAGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGCCTGGTTCTTATTGGTGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGA

Protein sequence

MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSLNIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEEAE*

Homology

[Close]

BLAST of CSPI07G07990 vs. ExPASy Swiss-Prot
Match: P80883 (Cytochrome b6-f complex subunit 7 (Fragment) OS=Spinacia oleracea OX=3562 GN=petM PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.9e-08
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 164 NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE 200
           NAA EIFRIAA++NGL L+GVA+GFVLLRIEA+VEE
Sbjct: 1   NAAAEIFRIAAVMNGLTLVGVAIGFVLLRIEATVEE 36

[Close]

BLAST of CSPI07G07990 vs. ExPASy TrEMBL
Match: A0A0A0K4W4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075020 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.1e-101
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL 60
           MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL
Sbjct: 1   MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL 60

Query: 61  NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA 120
           NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA
Sbjct: 61  NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA 120

Query: 121 HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV 180
           HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV
Sbjct: 121 HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV 180

Query: 181 LIGVAVGFVLLRIEASVEEAE 202
           LIGVAVGFVLLRIEASVEEAE
Sbjct: 181 LIGVAVGFVLLRIEASVEEAE 201

[Close]

BLAST of CSPI07G07990 vs. ExPASy TrEMBL
Match: A0A1S3C0U4 (uncharacterized protein LOC103495201 OS=Cucumis melo OX=3656 GN=LOC103495201 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 4.2e-54
Identity = 119/125 (95.20%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 77  MATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQS 136
           MATASATLSTAMS+AAPI+AGSRRQRQTN H+I+GLNSF GLKAHNNVVSLGLPVCADQS
Sbjct: 1   MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60

Query: 137 FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 196
           FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
Sbjct: 61  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120

Query: 197 VEEAE 202
           VEEAE
Sbjct: 121 VEEAE 125

[Close]

BLAST of CSPI07G07990 vs. ExPASy TrEMBL
Match: A0A6J1I5T0 (uncharacterized protein LOC111470941 OS=Cucurbita maxima OX=3661 GN=LOC111470941 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.7e-50
Identity = 111/124 (89.52%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 78  ATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQSF 137
           ATASATLS A+S+AAPI+AGSRRQR TN H+I+GLNSF GLKAHNN+ SLGLPVCADQSF
Sbjct: 3   ATASATLSPAISTAAPIAAGSRRQRNTNVHYITGLNSFGGLKAHNNIFSLGLPVCADQSF 62

Query: 138 AKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV 197
           A IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVL+GVAVGFVLLRIEASV
Sbjct: 63  ANIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASV 122

Query: 198 EEAE 202
           EEAE
Sbjct: 123 EEAE 126

[Close]

BLAST of CSPI07G07990 vs. ExPASy TrEMBL
Match: A0A6J1GND2 (uncharacterized protein LOC111455503 OS=Cucurbita moschata OX=3662 GN=LOC111455503 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 6.3e-50
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 78  ATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQSF 137
           AT SATLS  +S+AAPI+AGSRRQR TN H+I+GLNSFSGLKAHNN+ SLGLPVCADQSF
Sbjct: 3   ATPSATLSPPISTAAPIAAGSRRQRNTNVHYITGLNSFSGLKAHNNITSLGLPVCADQSF 62

Query: 138 AKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV 197
           A IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVL+GVAVGFVLLRIEASV
Sbjct: 63  ASIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASV 122

Query: 198 EEAE 202
           EEAE
Sbjct: 123 EEAE 126

[Close]

BLAST of CSPI07G07990 vs. ExPASy TrEMBL
Match: A0A6J1C3G5 (uncharacterized protein LOC111008007 OS=Momordica charantia OX=3673 GN=LOC111008007 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.5e-46
Identity = 110/128 (85.94%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 77  MATASATLSTAMSSAAPISAGSRR-QRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQ 136
           MATASATLS AMS+AAPI+AGSRR QR  N H+I+GLNSF GLKAHNNVVSLGLP+C D 
Sbjct: 1   MATASATLSPAMSTAAPIAAGSRRSQRHHNVHYITGLNSFGGLKAHNNVVSLGLPLCPDH 60

Query: 137 SFAKIVSSLKYPSKGKGKN--GGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRI 196
           SFAKIVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIAAIINGLVL+GVAVGFVLLRI
Sbjct: 61  SFAKIVSSLKYPSKGKGKNGGGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRI 120

Query: 197 EASVEEAE 202
           EA VEE E
Sbjct: 121 EAYVEETE 128

[Close]

BLAST of CSPI07G07990 vs. NCBI nr
Match: XP_004136999.1 (uncharacterized protein LOC101210164 [Cucumis sativus] >KAE8645889.1 hypothetical protein Csa_017701 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 5.1e-78
Identity = 169/201 (84.08%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFHSGSIPSLFLPQNPLFPSQFSL 60
           MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFH                     
Sbjct: 1   MNHPNSSYLIHSFSIQTLFSPPPLPPSISHLITFNFLFH--------------------- 60

Query: 61  NIDSSFSLPLLSGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA 120
                      SGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA
Sbjct: 61  -----------SGTIPMATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKA 120

Query: 121 HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV 180
           HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV
Sbjct: 121 HNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLV 169

Query: 181 LIGVAVGFVLLRIEASVEEAE 202
           LIGVAVGFVLLRIEASVEEAE
Sbjct: 181 LIGVAVGFVLLRIEASVEEAE 169

[Close]

BLAST of CSPI07G07990 vs. NCBI nr
Match: XP_008454894.1 (PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 8.8e-54
Identity = 119/125 (95.20%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 77  MATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQS 136
           MATASATLSTAMS+AAPI+AGSRRQRQTN H+I+GLNSF GLKAHNNVVSLGLPVCADQS
Sbjct: 1   MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60

Query: 137 FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 196
           FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
Sbjct: 61  FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120

Query: 197 VEEAE 202
           VEEAE
Sbjct: 121 VEEAE 125

[Close]

BLAST of CSPI07G07990 vs. NCBI nr
Match: XP_038887487.1 (uncharacterized protein LOC120077620 [Benincasa hispida])

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-51
Identity = 115/125 (92.00%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 77  MATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQS 136
           MATASATLS AM +AAPI+AGSRRQRQTN H+I+GLNSF GLKAHNNVVSLGLPVCADQS
Sbjct: 1   MATASATLSPAMPTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQS 60

Query: 137 FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 196
           FA I+SSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
Sbjct: 61  FANIMSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 120

Query: 197 VEEAE 202
           VEEAE
Sbjct: 121 VEEAE 125

[Close]

BLAST of CSPI07G07990 vs. NCBI nr
Match: XP_022972366.1 (uncharacterized protein LOC111470941 [Cucurbita maxima])

HSP 1 Score: 209.1 bits (531), Expect = 3.4e-50
Identity = 111/124 (89.52%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 78  ATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQSF 137
           ATASATLS A+S+AAPI+AGSRRQR TN H+I+GLNSF GLKAHNN+ SLGLPVCADQSF
Sbjct: 3   ATASATLSPAISTAAPIAAGSRRQRNTNVHYITGLNSFGGLKAHNNIFSLGLPVCADQSF 62

Query: 138 AKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV 197
           A IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVL+GVAVGFVLLRIEASV
Sbjct: 63  ANIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASV 122

Query: 198 EEAE 202
           EEAE
Sbjct: 123 EEAE 126

[Close]

BLAST of CSPI07G07990 vs. NCBI nr
Match: XP_022952989.1 (uncharacterized protein LOC111455503 [Cucurbita moschata])

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-49
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 78  ATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQSF 137
           AT SATLS  +S+AAPI+AGSRRQR TN H+I+GLNSFSGLKAHNN+ SLGLPVCADQSF
Sbjct: 3   ATPSATLSPPISTAAPIAAGSRRQRNTNVHYITGLNSFSGLKAHNNITSLGLPVCADQSF 62

Query: 138 AKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV 197
           A IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVL+GVAVGFVLLRIEASV
Sbjct: 63  ASIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLVGVAVGFVLLRIEASV 122

Query: 198 EEAE 202
           EEAE
Sbjct: 123 EEAE 126

[Close]

BLAST of CSPI07G07990 vs. TAIR 10
Match: AT2G26500.2 (cytochrome b6f complex subunit (petM), putative )

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-26
Identity = 70/126 (55.56%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 78  ATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNN-VVSLGLPVCADQS 137
           A A A +S   S     S  ++++ +    +I+GLNS+ GLKA NN VVS+G P+C +Q 
Sbjct: 4   AAAPAVISWTRSGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQC 63

Query: 138 FAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEA 197
           FA +V SL      KG+ G GGALS+TCNA GEIF+IAAI+N L L+GVAVGFVLLRIE 
Sbjct: 64  FANVVMSL------KGRRGNGGALSTTCNAVGEIFKIAAIMNALTLVGVAVGFVLLRIET 123

Query: 198 SVEEAE 202
           SVEEAE
Sbjct: 124 SVEEAE 123

[Close]

BLAST of CSPI07G07990 vs. TAIR 10
Match: AT2G26500.1 (cytochrome b6f complex subunit (petM), putative )

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-26
Identity = 70/126 (55.56%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 78  ATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNN-VVSLGLPVCADQS 137
           A A A +S   S     S  ++++ +    +I+GLNS+ GLKA NN VVS+G P+C +Q 
Sbjct: 4   AAAPAVISWTRSGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQC 63

Query: 138 FAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEA 197
           FA +V SL      KG+ G GGALS+TCNA GEIF+IAAI+N L L+GVAVGFVLLRIE 
Sbjct: 64  FANVVMSL------KGRRGNGGALSTTCNAVGEIFKIAAIMNALTLVGVAVGFVLLRIET 123

Query: 198 SVEEAE 202
           SVEEAE
Sbjct: 124 SVEEAE 123

[Close]

BLAST of CSPI07G07990 vs. TAIR 10
Match: AT2G26500.3 (cytochrome b6f complex subunit (petM), putative )

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 46/125 (36.80%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 78  ATASATLSTAMSSAAPISAGSRRQRQTNAHFISGLNSFSGLKAHNN-VVSLGLPVCADQS 137
           A A A +S   S     S  ++++ +    +I+GLNS+ GLKA NN VVS+G P+C +Q 
Sbjct: 4   AAAPAVISWTRSGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQC 63

Query: 138 FAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 197
           FA +V SLK                                     G  VGFVLLRIE S
Sbjct: 64  FANVVMSLK-------------------------------------GRRVGFVLLRIETS 91

Query: 198 VEEAE 202
           VEEAE
Sbjct: 124 VEEAE 91

The following BLAST results are available for this feature:

BLAST of CSPI07G07990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80883	9.9e-08	80.56	Cytochrome b6-f complex subunit 7 (Fragment) OS=Spinacia oleracea OX=3562 GN=pet...	[more]

BLAST of CSPI07G07990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4W4	2.1e-101	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075020 PE=3 SV=1	[more]
A0A1S3C0U4	4.2e-54	95.20	uncharacterized protein LOC103495201 OS=Cucumis melo OX=3656 GN=LOC103495201 PE=...	[more]
A0A6J1I5T0	1.7e-50	89.52	uncharacterized protein LOC111470941 OS=Cucurbita maxima OX=3661 GN=LOC111470941...	[more]
A0A6J1GND2	6.3e-50	88.71	uncharacterized protein LOC111455503 OS=Cucurbita moschata OX=3662 GN=LOC1114555...	[more]
A0A6J1C3G5	2.5e-46	85.94	uncharacterized protein LOC111008007 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of CSPI07G07990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136999.1	5.1e-78	84.08	uncharacterized protein LOC101210164 [Cucumis sativus] >KAE8645889.1 hypothetica...	[more]
XP_008454894.1	8.8e-54	95.20	PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]	[more]
XP_038887487.1	1.4e-51	92.00	uncharacterized protein LOC120077620 [Benincasa hispida]	[more]
XP_022972366.1	3.4e-50	89.52	uncharacterized protein LOC111470941 [Cucurbita maxima]	[more]
XP_022952989.1	1.3e-49	88.71	uncharacterized protein LOC111455503 [Cucurbita moschata]	[more]

BLAST of CSPI07G07990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26500.2	4.8e-26	55.56	cytochrome b6f complex subunit (petM), putative	[more]
AT2G26500.1	4.8e-26	55.56	cytochrome b6f complex subunit (petM), putative	[more]
AT2G26500.3	1.4e-09	36.80	cytochrome b6f complex subunit (petM), putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012595	PetM of cytochrome b6/f complex subunit 7	PFAM	PF08041	PetM	coord: 135..162 e-value: 1.3E-9 score: 37.4
IPR012595	PetM of cytochrome b6/f complex subunit 7	HAMAP	MF_00396	Cytb6_f_PetM	coord: 133..165 score: 13.016713
None	No IPR available	PANTHER	PTHR34951	B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED	coord: 41..169 coord: 1..44
None	No IPR available	PANTHER	PTHR34951:SF1	B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED	coord: 41..169 coord: 1..44
None	No IPR available	SUPERFAMILY	103441	PetM subunit of the cytochrome b6f complex	coord: 134..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G07990.1	CSPI07G07990.1	mRNA
CSPI07G07990.2	CSPI07G07990.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009512	cytochrome b6f complex
cellular_component	GO:0016021	integral component of membrane