CSPI07G06980 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G06980
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type domain-containing protein
Location	Chr7: 5092176 .. 5095072 (+)
RNA-Seq Expression	CSPI07G06980
Synteny	CSPI07G06980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACAATTATAAAAATAGAGATCCAACAATTCAATTTCTAAAAAAAAAGAGAGAGAGAGAGAGAGAGAATTACAATTAAACTAAACTAAGGTTCCAACCTAATTTAACCCATAAATTCCCCCAATACTCAATACAACCAAATGGACATCACATCTTACCTCTAAGCTCACAAATTATTACAAACCAAATCAATAAAAGACAAAAGCTATAAAGATAAGAACTAATTCATCCATTGAGTTCTTCATTTCCAATCCAATCCACGTCCACTTTTTATTTCAAGTAACTAAGCAAATCTCCTCTCCATTACCTTCAACTTCCATCCACATTTCTTCGAAATTTCGACTCCATTTCTTCCCAGTTTCAAACCCTTTTCATTTTTCCTTCATTCGCCTTCGTTTTGAGTGAAAACAATCCTAGAACCGGCTGAGTTTGTGCATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTATAGATTTGGTCGCACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGTCGTCATCATGGTCACAATGGCAATCACCGCCGCGACTTGAACTCCTGTGGCGATTTCCGGCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCTCGGTTTTTTAACCCTGTAAGAAGGATTAAACAAATTTTGCCAGATTCTGGGTTTATGTTATTTGACAATTTTTTTTTACTTGGATGAAGTATATATTAACCGGTTGAGAATAGTTGGATTTGGAAGAACTGTTTGTAACTTGTTTTGATTGGGAAATTTTTAAGCGTTTCCGACATAAAATTTCTTCTAAACTGTAGAACCTGTTGGGAATATGTTGAAAATATCATATTTGCCCTAATTTATCAGCTTAGGTTGTTGGTATGGTTTTACTTGGTTCATGCCCTAAGAATAATTGCACTTAACTATGGATTGATCCAACAAACGACTCTATTGATAACCGTTTAATTTTTTGGTTTTGAAAATTAAGCTTGTTGCTTCCAAGTTCCAAGTATGGATTTCTTTATTTTGTTTATGTTTTCAATATCCGGGCTTAAAGGAATAATTTTTAGAAGCTTGTTTTGTTTTTAAAATTAGGCAAGATGAAAACTATTGGAAAGAAATCGTTTGAAAACAGGGACAGTTTTTCAGAAACCAAATGGTTATTAAATTGATCTCTAGCTGCCAAGCTATTGATTTGATTATTGTTATTCTTCAGTGATAATTCTGTTTTCCATTGCCGTGAAATAATTAGAACCAGAACAAGTCAACTTGGTACTGAGAGTGACGATGGATATAACTTTTCAAGTTTTATTAGCTTCTAAATGCTACTTTGCTATTAAACTATGATTTAATTGGTATGTGTTCATGGAAACATAATTTGGTTACAATTAAGAATGCTTTTCTTTATTATTATTGTTCTTTTTTTATCTGGGTTGTCATCTCTGTCTGAATTTTAACTTCAATTAGTTTGGAGGCATTAACACTATGTTTTCGTTGTAGCTTTCCGTTGATCGATCGCCTGCACAGTCTGACTCAGCTACGAGCGTTGCTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTAGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGGGGTGCCTCGTCACCGACGACCAGGTCAGTTCCTATTGTCATGTCCTTGTTTTTCACATTACTATTCAGAAAACATTTCTGACTTCAACTAGAATGTTCCTTGCTATTTGTCTAGATTTAACGGCATGTTTGGAAGCGATCTTAAAATTGTTAGAAACACTTTTCTTATGTTTATAATCACTCTAAAACATGTCTTTAGTCATTCAAAGTTTAAAAATCAATTTGATTATTTGATTTCACACGTTTAAACTTGATTTTTATATAATCAAAGTTGATTTTGAATACTTAAAAGAATGCCCGTAAGCATATGCTGTGGTATGTGAATCTACTTGTATGATTTTCTTTTGTCGATAGGGATTTGGTTTGTATTGTGTACTCATGAAATAGGATCCAATTCCAACAAACTCGTAAAGTTTCTACAAACTCTTGTCTAAGACTTTTAAAGATAAATTGTTACTGGGTTGCCATCTGAATGTTGAAAACTAGAATAGATCCCAGCTCTGTCGTGTATTGCTAACCAAATAAGTTTATTCATCAGAAACGCTCTTGTTGAAGCATCAAATGGAAATCCAGAAACCACGACAAGTCGATCACAGAGGATATCCCTCGTCGATGCTGACAGGATGCGGTTAGTAGCTGTACCTAGCAAGAGGCCCCCTGGTCTTTCACAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCATATCATCAACGAAGGCGTGATGACAATAACATCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATCCTTGCCTGGACCGATGGATTAGAACTTGTGGAGAATGTCCATATTGTCGACAGCATATCGCCATCAACTAATATTTTTCTAACACGTTTCGCAACTTGGGATTTCCTGTATGTGTAGAAAACTCAGAGACAATCCATTGTTCCAAGTTGTGGTATTAATCTTTTATAGTTCTATAGTTGATGATGTTCGTACTTGTATCCTTCTAAGATCCTGTATTGACTCCAAATTGTGTGGCAATTTTAATAGCCAAAGAGGATGCTTACGTGATTTCTCTTCTTTTTAATCGTTTCATGTAATTTATATTTGATTTCTTATCATTTTGGTTCTTACGAGAGCGTTTAGGGTACAAACTATTCTAAGATTATAATTACCACTTGC

mRNA sequence

TTACAATTATAAAAATAGAGATCCAACAATTCAATTTCTAAAAAAAAAGAGAGAGAGAGAGAGAGAGAATTACAATTAAACTAAACTAAGGTTCCAACCTAATTTAACCCATAAATTCCCCCAATACTCAATACAACCAAATGGACATCACATCTTACCTCTAAGCTCACAAATTATTACAAACCAAATCAATAAAAGACAAAAGCTATAAAGATAAGAACTAATTCATCCATTGAGTTCTTCATTTCCAATCCAATCCACGTCCACTTTTTATTTCAAGTAACTAAGCAAATCTCCTCTCCATTACCTTCAACTTCCATCCACATTTCTTCGAAATTTCGACTCCATTTCTTCCCAGTTTCAAACCCTTTTCATTTTTCCTTCATTCGCCTTCGTTTTGAGTGAAAACAATCCTAGAACCGGCTGAGTTTGTGCATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTATAGATTTGGTCGCACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGTCGTCATCATGGTCACAATGGCAATCACCGCCGCGACTTGAACTCCTGTGGCGATTTCCGGCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCTCGGTTTTTTAACCCTCTTTCCGTTGATCGATCGCCTGCACAGTCTGACTCAGCTACGAGCGTTGCTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTAGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGGGGTGCCTCGTCACCGACGACCAGAAACGCTCTTGTTGAAGCATCAAATGGAAATCCAGAAACCACGACAAGTCGATCACAGAGGATATCCCTCGTCGATGCTGACAGGATGCGGTTAGTAGCTGTACCTAGCAAGAGGCCCCCTGGTCTTTCACAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCATATCATCAACGAAGGCGTGATGACAATAACATCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATCCTTGCCTGGACCGATGGATTAGAACTTGTGGAGAATGTCCATATTGTCGACAGCATATCGCCATCAACTAATATTTTTCTAACACGTTTCGCAACTTGGGATTTCCTGTATGTGTAGAAAACTCAGAGACAATCCATTGTTCCAAGTTGTGGTATTAATCTTTTATAGTTCTATAGTTGATGATGTTCGTACTTGTATCCTTCTAAGATCCTGTATTGACTCCAAATTGTGTGGCAATTTTAATAGCCAAAGAGGATGCTTACGTGATTTCTCTTCTTTTTAATCGTTTCATGTAATTTATATTTGATTTCTTATCATTTTGGTTCTTACGAGAGCGTTTAGGGTACAAACTATTCTAAGATTATAATTACCACTTGC

Coding sequence (CDS)

ATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTATAGATTTGGTCGCACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGTCGTCATCATGGTCACAATGGCAATCACCGCCGCGACTTGAACTCCTGTGGCGATTTCCGGCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCTCGGTTTTTTAACCCTCTTTCCGTTGATCGATCGCCTGCACAGTCTGACTCAGCTACGAGCGTTGCTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTAGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGGGGTGCCTCGTCACCGACGACCAGAAACGCTCTTGTTGAAGCATCAAATGGAAATCCAGAAACCACGACAAGTCGATCACAGAGGATATCCCTCGTCGATGCTGACAGGATGCGGTTAGTAGCTGTACCTAGCAAGAGGCCCCCTGGTCTTTCACAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCATATCATCAACGAAGGCGTGATGACAATAACATCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATCCTTGCCTGGACCGATGGATTAGAACTTGTGGAGAATGTCCATATTGTCGACAGCATATCGCCATCAACTAA

Protein sequence

MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSSLQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHIAIN*

Homology

[Close]

BLAST of CSPI07G06980 vs. ExPASy Swiss-Prot
Match: Q852U6 (Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RHY1A PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.9e-35
Identity = 99/258 (38.37%), Postives = 138/258 (53.49%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHG-HNGNHRRDLNSCGDFRRS 60
           MTSASELF  RR R GR+D  L  D+     H  +  R HG H+ N R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLQERRQSPRFFNPLSVDRSPAQSDSATS-VASRNNINGNTQNSLRSGLSRDSRLPGSVL 120
           + + RR    F +P+     P +    TS   + ++ +  TQ+S    L+   RLPG+VL
Sbjct: 61  TPRLRR---FFHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPG 180
           LAR+RL ERLRG S  +   +   + +   E++        +     +++    +K+P G
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRVSLDDQRESSFHSIDGDPIFQLAGLQVTYECNKKPQG 180

Query: 181 LSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCL 240
           L+QDAIN L  + F + +       +     DCSICLESFT GD LI LPC H FH  CL
Sbjct: 181 LTQDAINCLHRQTFSSAE-------VKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCL 240

Query: 241 DRWIRTCGECPYCRQHIA 257
           + W+R CG+CP CR+ IA
Sbjct: 241 NPWLRACGDCPCCRRAIA 248

[Close]

BLAST of CSPI07G06980 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10
Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 176 PPGLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLP-CEHKFH 235
           P GL +  IN++ +  +   D  ++       +TDCS+CL  F+DG+ L  LP C H FH
Sbjct: 129 PSGLDETLINKITVCKYRRGDGFVH-------TTDCSVCLGEFSDGESLRLLPRCSHAFH 188

Query: 236 HPCLDRWIRTCGECPYCRQHI 256
             C+D W+++   CP CR +I
Sbjct: 189 QQCIDTWLKSHSNCPLCRANI 202

[Close]

BLAST of CSPI07G06980 vs. ExPASy Swiss-Prot
Match: A5WWA0 (E3 ubiquitin-protein ligase znrf3 OS=Danio rerio OX=7955 GN=znrf3 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09
Identity = 23/56 (41.07%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 200 NEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHI 256
           ++ V + +++DC+ICLE + DG++L  +PC H+FH  C+D W+     CP+CR +I
Sbjct: 256 SDSVSSSSTSDCAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI 311

[Close]

BLAST of CSPI07G06980 vs. ExPASy Swiss-Prot
Match: Q7T037 (E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis OX=8355 GN=rnf12-b PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09
Identity = 26/83 (31.33%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 175 RPPGLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFH 234
           +P GL+++ I+ L    +   D +            CS+C+  +T+G+KL  LPC H++H
Sbjct: 677 QPRGLTKEQIDNLSTRNYGENDAL----------KTCSVCITEYTEGNKLRKLPCSHEYH 736

Query: 235 HPCLDRWIRTCGECPYCRQHIAI 258
             C+DRW+     CP CR+ + +
Sbjct: 737 IHCIDRWLSENSTCPICRRAVLV 749

[Close]

BLAST of CSPI07G06980 vs. ExPASy Swiss-Prot
Match: Q07G42 (E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis OX=8364 GN=rnf12 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.0e-09
Identity = 36/127 (28.35%), Postives = 59/127 (46.46%), Query Frame = 0


Query: 132 SSPTTRNALVEASNGNPETTTSRSQRISLVD-ADRMRLVAVPSKRPPGLSQDAINRLQLE 191
           S+ +T +A  E  N     T   S  +  +  A    L      +P GL+++ I+ L   
Sbjct: 515 SNVSTSSARREGRNSRGGVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLSTR 574

Query: 192 VFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPY 251
            F   D +            CS+C+  +T+G+KL  LPC H++H  C+DRW+     CP 
Sbjct: 575 NFGENDAL----------KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPI 631

Query: 252 CRQHIAI 258
           CR+ + +
Sbjct: 635 CRRAVLV 631

[Close]

BLAST of CSPI07G06980 vs. ExPASy TrEMBL
Match: A0A0A0K6D2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071510 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 8.2e-143
Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTDHIIN+GVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR
Sbjct: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240

Query: 241 WIRTCGECPYCRQHIAIN 259
           WIRTCGECPYCRQHIAIN
Sbjct: 241 WIRTCGECPYCRQHIAIN 258

[Close]

BLAST of CSPI07G06980 vs. ExPASy TrEMBL
Match: A0A5A7SMR0 (E3 ubiquitin-protein ligase RLIM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001110 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.1e-134
Identity = 242/256 (94.53%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDR+LQYQRRHHGHN NHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSV SRNNINGNTQNSLRSGLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPT+RNALVEASNGNPE +TSRSQRISL+DADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTD II++ VMTITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDR
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240

Query: 241 WIRTCGECPYCRQHIA 257
           WIRTCGECPYCRQHI+
Sbjct: 241 WIRTCGECPYCRQHIS 256

[Close]

BLAST of CSPI07G06980 vs. ExPASy TrEMBL
Match: A0A1S3C156 (E3 ubiquitin-protein ligase RLIM OS=Cucumis melo OX=3656 GN=LOC103495299 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.1e-134
Identity = 242/256 (94.53%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDR+LQYQRRHHGHN NHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSV SRNNINGNTQNSLRSGLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPT+RNALVEASNGNPE +TSRSQRISL+DADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTD II++ VMTITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDR
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240

Query: 241 WIRTCGECPYCRQHIA 257
           WIRTCGECPYCRQHI+
Sbjct: 241 WIRTCGECPYCRQHIS 256

[Close]

BLAST of CSPI07G06980 vs. ExPASy TrEMBL
Match: A0A6J1JIJ3 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111486117 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.0e-108
Identity = 203/259 (78.38%), Postives = 222/259 (85.71%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDRHLQYQRRHHGHNGNHRR LN+CG FRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQER QSPRF NPL+VDRSPAQS+S  SV SRNNIN N QNSLR GLS DSRLPGSVLLA
Sbjct: 61  LQERHQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERL ERLRGASSPT RN LVEA + +PE + SRSQ ISL DADR+RLV   SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240
            +AIN LQLE FI+ +HII++ + MT TS DCSICL+SF DGDKLIHLPC+HKFHH CL+
Sbjct: 181 LEAINCLQLERFIDIEHIIDDDLTMTTTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIAIN 259
            WIRTCGECPYCRQHI +N
Sbjct: 241 PWIRTCGECPYCRQHIVVN 259

[Close]

BLAST of CSPI07G06980 vs. ExPASy TrEMBL
Match: A0A6J1D583 (probable E3 ubiquitin-protein ligase RHY1A OS=Momordica charantia OX=3673 GN=LOC111017418 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.5e-107
Identity = 198/260 (76.15%), Postives = 226/260 (86.92%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR+GRTD+DLGLDSEPPDRHL   RRHHGH G HRRDLN+CG FRRSS
Sbjct: 1   MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGN--TQNSLRSGLSRDSRLPGSVL 120
           LQER QSPRF  PL+ DRS AQSDS TS+ SRN+IN N   +NS R+GLS DSRLPG+VL
Sbjct: 61  LQERHQSPRFSYPLAQDRSAAQSDSVTSLGSRNSINANIHIRNSSRTGLSXDSRLPGAVL 120

Query: 121 LARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPG 180
           LARERLLERLRGAS PT+RN L EAS+GNPE +TS+SQRISLVDADR++LV   +KRPPG
Sbjct: 121 LARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPG 180

Query: 181 LSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCL 240
           LS +A++RLQLEVF+NT+HII++   TITSTDCSICLESFTDGDKLIHLPCEHKFHH CL
Sbjct: 181 LSXEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACL 240

Query: 241 DRWIRTCGECPYCRQHIAIN 259
           DRW+R+CG+CPYCRQ I +N
Sbjct: 241 DRWVRSCGDCPYCRQRIDVN 260

[Close]

BLAST of CSPI07G06980 vs. NCBI nr
Match: XP_004136947.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN43862.1 hypothetical protein Csa_017364 [Cucumis sativus])

HSP 1 Score: 516.2 bits (1328), Expect = 1.7e-142
Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTDHIIN+GVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR
Sbjct: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240

Query: 241 WIRTCGECPYCRQHIAIN 259
           WIRTCGECPYCRQHIAIN
Sbjct: 241 WIRTCGECPYCRQHIAIN 258

[Close]

BLAST of CSPI07G06980 vs. NCBI nr
Match: XP_008455026.1 (PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo] >KAA0031356.1 E3 ubiquitin-protein ligase RLIM [Cucumis melo var. makuwa] >TYK06808.1 E3 ubiquitin-protein ligase RLIM [Cucumis melo var. makuwa])

HSP 1 Score: 487.6 bits (1254), Expect = 6.4e-134
Identity = 242/256 (94.53%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDR+LQYQRRHHGHN NHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSV SRNNINGNTQNSLRSGLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPT+RNALVEASNGNPE +TSRSQRISL+DADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTD II++ VMTITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDR
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240

Query: 241 WIRTCGECPYCRQHIA 257
           WIRTCGECPYCRQHI+
Sbjct: 241 WIRTCGECPYCRQHIS 256

[Close]

BLAST of CSPI07G06980 vs. NCBI nr
Match: XP_038888994.1 (probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida])

HSP 1 Score: 438.0 bits (1125), Expect = 5.8e-119
Identity = 219/259 (84.56%), Postives = 234/259 (90.35%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFY RRYR GRTD+DLGLDSEPPDR+LQYQRRHHGHN NHRRD NSCG FRRSS
Sbjct: 1   MTSASELFYSRRYRLGRTDADLGLDSEPPDRYLQYQRRHHGHNANHRRDFNSCGTFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDR P QSDS TS  SRNNIN NTQNSLR+GLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRLPTQSDSVTSDGSRNNINPNTQNSLRTGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSP +RNALVEA +G+PE +T+RSQRISLVDADRM+LV  PSKRPPGLS
Sbjct: 121 RERLLERLRGASSPRSRNALVEALDGSPEISTNRSQRISLVDADRMQLVPAPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240
           QDAI+RLQLEVFINT+HII++ V  T TS +CSICLESFTDGD LIHLPCEHKFHH CLD
Sbjct: 181 QDAIDRLQLEVFINTEHIIDDDVTTTTTSNECSICLESFTDGDVLIHLPCEHKFHHACLD 240

Query: 241 RWIRTCGECPYCRQHIAIN 259
           RWIRTCGECPYCRQH+ IN
Sbjct: 241 RWIRTCGECPYCRQHVVIN 259

[Close]

BLAST of CSPI07G06980 vs. NCBI nr
Match: XP_022988901.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita maxima])

HSP 1 Score: 402.9 bits (1034), Expect = 2.1e-108
Identity = 203/259 (78.38%), Postives = 222/259 (85.71%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDRHLQYQRRHHGHNGNHRR LN+CG FRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQER QSPRF NPL+VDRSPAQS+S  SV SRNNIN N QNSLR GLS DSRLPGSVLLA
Sbjct: 61  LQERHQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERL ERLRGASSPT RN LVEA + +PE + SRSQ ISL DADR+RLV   SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240
            +AIN LQLE FI+ +HII++ + MT TS DCSICL+SF DGDKLIHLPC+HKFHH CL+
Sbjct: 181 LEAINCLQLERFIDIEHIIDDDLTMTTTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIAIN 259
            WIRTCGECPYCRQHI +N
Sbjct: 241 PWIRTCGECPYCRQHIVVN 259

[Close]

BLAST of CSPI07G06980 vs. NCBI nr
Match: XP_023529438.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.9 bits (1034), Expect = 2.1e-108
Identity = 203/259 (78.38%), Postives = 223/259 (86.10%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDRHLQYQRRHHGHNGNHRR LN+CG FRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQERRQSPRF NPL+VDRSPAQS+S  SV SRNNIN N QNSLR GLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERL ERLRGASSPT RN LVEA + +PE + SRSQ ISL DADR+RLV   SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGVMTI-TSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240
           Q+AIN LQLE FI+ +HII++ +  I TS DCSICL+SF DGDKLIHLPC+HKFHH CL+
Sbjct: 181 QEAINCLQLERFIDIEHIIDDDLTMIRTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIAIN 259
           +WIRTCGECPYCRQ I +N
Sbjct: 241 QWIRTCGECPYCRQRIVVN 259

[Close]

BLAST of CSPI07G06980 vs. TAIR 10
Match: AT1G49850.1 (RING/U-box superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 99/258 (38.37%), Postives = 138/258 (53.49%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHG-HNGNHRRDLNSCGDFRRS 60
           MTSASELF  RR R GR+D  L  D+     H  +  R HG H+ N R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLQERRQSPRFFNPLSVDRSPAQSDSATS-VASRNNINGNTQNSLRSGLSRDSRLPGSVL 120
           + + RR    F +P+     P +    TS   + ++ +  TQ+S    L+   RLPG+VL
Sbjct: 61  TPRLRR---FFHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPG 180
           LAR+RL ERLRG S  +   +   + +   E++        +     +++    +K+P G
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRVSLDDQRESSFHSIDGDPIFQLAGLQVTYECNKKPQG 180

Query: 181 LSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCL 240
           L+QDAIN L  + F + +       +     DCSICLESFT GD LI LPC H FH  CL
Sbjct: 181 LTQDAINCLHRQTFSSAE-------VKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCL 240

Query: 241 DRWIRTCGECPYCRQHIA 257
           + W+R CG+CP CR+ IA
Sbjct: 241 NPWLRACGDCPCCRRAIA 248

[Close]

BLAST of CSPI07G06980 vs. TAIR 10
Match: AT2G15580.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.6e-11
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 210 DCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHI 256
           DC+ICL+ F  G+ L+HLPC HKFH  CL  W+ T   CPYCR  I
Sbjct: 149 DCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194

[Close]

BLAST of CSPI07G06980 vs. TAIR 10
Match: AT1G68070.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-10
Identity = 24/61 (39.34%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 195 TDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQH 254
           ++++ NE V+     DC ICL S+ DG +L+ LPC H FH  C+ +W++    CP C+ +
Sbjct: 276 SENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFN 335

Query: 255 I 256
           I
Sbjct: 336 I 336

[Close]

BLAST of CSPI07G06980 vs. TAIR 10
Match: AT5G20910.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 8.1e-10
Identity = 36/121 (29.75%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 142 EASNGNPETTTSRSQRI--SLVDADRMRLVAV-----PSKRPPGLSQDAINRLQLEVFIN 201
           E+SNG  E T   +  +   L++   M +  +     P + PP  S++ + +L + +F  
Sbjct: 160 ESSNGPTENTIGETANLMQELINGLDMIIPDILDDGGPPRAPPA-SKEVVEKLPVIIF-- 219

Query: 202 TDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQH 256
           T+ ++ +        +C IC E+   GDK+  LPC+H FH PCL  W+     CP CR  
Sbjct: 220 TEELLKK---FGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHE 274

[Close]

BLAST of CSPI07G06980 vs. TAIR 10
Match: AT5G10650.1 (RING/U-box superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 46/178 (25.84%), Postives = 83/178 (46.63%), Query Frame = 0


Query: 79  SPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLARERLLERLRGASSPTTRN 138
           SP ++D ++S+ +R+ ++    N +   L    R+     L  E+L      AS  T   
Sbjct: 349 SPTEADPSSSLVNRDGLSHYNMNGIAEVLLALERIEHDEELTYEQL------ASIETN-- 408

Query: 139 ALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKR---PPGLSQDAINR-LQLEVFIN 198
             + +S         R  R+ + +     L+A+  K       LS++A++R L+  ++  
Sbjct: 409 --LFSSGMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQE 468

Query: 199 TDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCR 253
           TD   +  +       CSIC E + DGD+L  +PC+H +H  C+ +W+R    CP C+
Sbjct: 469 TDETGSISLYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516

The following BLAST results are available for this feature:

BLAST of CSPI07G06980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q852U6	1.9e-35	38.37	Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q7XLY8	2.1e-10	37.04	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
A5WWA0	1.0e-09	41.07	E3 ubiquitin-protein ligase znrf3 OS=Danio rerio OX=7955 GN=znrf3 PE=1 SV=2	[more]
Q7T037	1.8e-09	31.33	E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis OX=8355 GN=rnf12-b PE=2 SV...	[more]
Q07G42	3.0e-09	28.35	E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis OX=8364 GN=rnf12 PE=2 SV...	[more]

BLAST of CSPI07G06980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6D2	8.2e-143	99.22	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071510 P...	[more]
A0A5A7SMR0	3.1e-134	94.53	E3 ubiquitin-protein ligase RLIM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C156	3.1e-134	94.53	E3 ubiquitin-protein ligase RLIM OS=Cucumis melo OX=3656 GN=LOC103495299 PE=4 SV...	[more]
A0A6J1JIJ3	1.0e-108	78.38	probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1D583	5.5e-107	76.15	probable E3 ubiquitin-protein ligase RHY1A OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of CSPI07G06980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136947.1	1.7e-142	99.22	probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN43862.1 hypothe...	[more]
XP_008455026.1	6.4e-134	94.53	PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo] >KAA0031356.1 E3 ubiq...	[more]
XP_038888994.1	5.8e-119	84.56	probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida]	[more]
XP_022988901.1	2.1e-108	78.38	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita maxima]	[more]
XP_023529438.1	2.1e-108	78.38	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI07G06980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49850.1	1.3e-36	38.37	RING/U-box superfamily protein	[more]
AT2G15580.1	5.6e-11	56.52	RING/U-box superfamily protein	[more]
AT1G68070.1	1.6e-10	39.34	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT5G20910.1	8.1e-10	29.75	RING/U-box superfamily protein	[more]
AT5G10650.1	1.2e-08	25.84	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 211..251 e-value: 2.3E-5 score: 33.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 210..252 e-value: 3.6E-13 score: 49.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 211..252 score: 12.946621
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 169..257 e-value: 3.5E-19 score: 70.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..155
None	No IPR available	PANTHER	PTHR45931:SF10	E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED	coord: 1..257
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 1..257
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 210..252 e-value: 4.22073E-16 score: 68.0973
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 210..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G06980.1	CSPI07G06980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity