CSPI07G06960 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G06960
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 5086153 .. 5086378 (+)
RNA-Seq ExpressionCSPI07G06960
SyntenyCSPI07G06960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGTGTTGGGTTTTGATTGGTGGGTTAGTGAGAAACAGCTCCGCCGCGTGAATGGTGGTGGTGGGGAGGCGGTGGGTACCCACCACCGTTCACATAACTAACAAAAATAGCTTTCTTGTTTGCCCGGAACCGGTGAACTTAGAGAACACACTGAGAACTGAGAAGAGAGGGTTTTGGACAGTCAAGTTTTTGCCTCTGAAGTGGGACCCAAACGTGGAATGA

mRNA sequence

ATGTGGGTGTTGGGTTTTGATTGGTGGGTTAGTGAGAAACAGCTCCGCCGCGTGAATGGTGGTGGTGGGGAGGCGGTGGAGAACACACTGAGAACTGAGAAGAGAGGGTTTTGGACAGTCAAGTTTTTGCCTCTGAAGTGGGACCCAAACGTGGAATGA

Coding sequence (CDS)

ATGTGGGTGTTGGGTTTTGATTGGTGGGTTAGTGAGAAACAGCTCCGCCGCGTGAATGGTGGTGGTGGGGAGGCGGTGGAGAACACACTGAGAACTGAGAAGAGAGGGTTTTGGACAGTCAAGTTTTTGCCTCTGAAGTGGGACCCAAACGTGGAATGA

Protein sequence

MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPLKWDPNVE*
Homology
[Close]
BLAST of CSPI07G06960 vs. ExPASy TrEMBL
Match: A0A0A0K2G2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071490 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.8e-24
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPLKWDPNVE 53
          MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLP KWDPNVE
Sbjct: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPQKWDPNVE 52

[Close]
BLAST of CSPI07G06960 vs. NCBI nr
Match: KGN43860.1 (hypothetical protein Csa_017213 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 1.6e-23
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPLKWDPNVE 53
          MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLP KWDPNVE
Sbjct: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPQKWDPNVE 52

The following BLAST results are available for this feature:
BLAST of CSPI07G06960 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G06960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2G27.8e-2498.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071490 PE=4 SV=1[more]
BLAST of CSPI07G06960 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43860.11.6e-2398.08hypothetical protein Csa_017213 [Cucumis sativus][more]
BLAST of CSPI07G06960 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06960.1CSPI07G06960.1mRNA