CSPI07G06000 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G06000
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	PP1 domain-containing protein
Location	Chr7: 4469200 .. 4469523 (-)
RNA-Seq Expression	CSPI07G06000
Synteny	CSPI07G06000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACGAAGTTCTTTTGTGAAAGTGAAGGGTTGTGATTGTTCAAGTAATAATTGGACACAAATCCCTATCGAAGACCCTTACTTGCAAGAAATTTCAAAGCTTGCTGTGAAAATACACAACAGTTCAGCTCAAGACAATTTGGAATACGATGGGATTTATGAAAGTTGGTATAAAAAATTGAATGACAACACCTTAGAGTATCGTTTTCTTCTCAAAGGAATCAACTATTTGGGACGTGTGAAGAACTATGAAGCTATTGTTCATGATGACATTGGTGCCACTCAAAAGAATACTAAGCTCCAATATAATCTTTCAACTTAA

mRNA sequence

ATGAGACGAAGTTCTTTTGTGAAAGTGAAGGGTTGTGATTGTTCAAGTAATAATTGGACACAAATCCCTATCGAAGACCCTTACTTGCAAGAAATTTCAAAGCTTGCTGTGAAAATACACAACAGTTCAGCTCAAGACAATTTGGAATACGATGGGATTTATGAAAGTTGGTATAAAAAATTGAATGACAACACCTTAGAGTATCGTTTTCTTCTCAAAGGAATCAACTATTTGGGACGTGTGAAGAACTATGAAGCTATTGTTCATGATGACATTGGTGCCACTCAAAAGAATACTAAGCTCCAATATAATCTTTCAACTTAA

Coding sequence (CDS)

ATGAGACGAAGTTCTTTTGTGAAAGTGAAGGGTTGTGATTGTTCAAGTAATAATTGGACACAAATCCCTATCGAAGACCCTTACTTGCAAGAAATTTCAAAGCTTGCTGTGAAAATACACAACAGTTCAGCTCAAGACAATTTGGAATACGATGGGATTTATGAAAGTTGGTATAAAAAATTGAATGACAACACCTTAGAGTATCGTTTTCTTCTCAAAGGAATCAACTATTTGGGACGTGTGAAGAACTATGAAGCTATTGTTCATGATGACATTGGTGCCACTCAAAAGAATACTAAGCTCCAATATAATCTTTCAACTTAA

Protein sequence

MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST*

Homology

[Close]

BLAST of CSPI07G06000 vs. ExPASy TrEMBL
Match: A0A0A0K639 (PP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G066200 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.4e-56
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK 60
           MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK
Sbjct: 1   MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK 60

Query: 61  LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST 108
           LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST
Sbjct: 61  LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST 107

[Close]

BLAST of CSPI07G06000 vs. ExPASy TrEMBL
Match: A0A6J1ELQ9 (uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC111434515 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 30/85 (35.29%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 5   SFVKVKGCDCSSNNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLND 64
           S V +   +     W +IP ++ P +QE++K AV  HN+ + + L+Y  +Y+ W+  L  
Sbjct: 503 SIVLIVSHEPQEKKWIKIPNVQVPLVQELAKFAVDEHNNKSGEGLKYVEVYDGWFMDLGQ 562

Query: 65  NTLEYRFLLKGINYLGRVKNYEAIV 89
           + +++RF LK  ++LGRV++YEA+V
Sbjct: 563 DNIKFRFHLKAKDWLGRVRSYEAVV 587

[Close]

BLAST of CSPI07G06000 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-07
Identity = 34/98 (34.69%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 7   VKVKGCDCSS--NNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLND 66
           V  KGC        W +IP +    LQ+++K AV+  N+   D L Y+ I+E WY +L  
Sbjct: 3   VSSKGCAQGEVVEKWIKIPDVNGHCLQQVAKFAVEKFNAEHGDCLIYNSIFEGWYLELGS 62

Query: 67  NTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKL 102
           N L+YR  +K +++LGR+  YE +V ++    ++  KL
Sbjct: 63  NNLKYRLHIKAVDFLGRLLIYEVVVFEEKPDKERIRKL 100

[Close]

BLAST of CSPI07G06000 vs. ExPASy TrEMBL
Match: A0A6J1JKF7 (uncharacterized protein LOC111486626 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486626 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07
Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 7   VKVKGCDCSSNNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLNDNT 66
           VKV G   +   W +IP +    +QE++KLAV+  N     +L+YD I+E WY +L  N 
Sbjct: 5   VKVCGQVPAVEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYDSIHEGWYCELGQNN 64

Query: 67  LEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKL 102
           L+YR  ++ I++L R   YEA+V ++    ++  KL
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKLERIRKL 100

[Close]

BLAST of CSPI07G06000 vs. ExPASy TrEMBL
Match: A0A6J1JG70 (uncharacterized protein LOC111486626 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486626 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07
Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 7   VKVKGCDCSSNNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLNDNT 66
           VKV G   +   W +IP +    +QE++KLAV+  N     +L+YD I+E WY +L  N 
Sbjct: 5   VKVCGQVPAVEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYDSIHEGWYCELGQNN 64

Query: 67  LEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKL 102
           L+YR  ++ I++L R   YEA+V ++    ++  KL
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKLERIRKL 100

[Close]

BLAST of CSPI07G06000 vs. NCBI nr
Match: KGN43762.1 (hypothetical protein Csa_017233 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 1.1e-55
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK 60
           MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK
Sbjct: 1   MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK 60

Query: 61  LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST 108
           LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST
Sbjct: 61  LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST 107

[Close]

BLAST of CSPI07G06000 vs. NCBI nr
Match: KAG6571861.1 (Cysteine proteinase inhibitor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.4 bits (176), Expect = 2.7e-09
Identity = 33/91 (36.26%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 13  DCSSNNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLNDNTLEYRFL 72
           DC  + WT IP I++  ++E +K  V  +N    + L+Y+GI  +WY +L +  L+Y F+
Sbjct: 24  DCCPSGWTPIPDIDEGCVKEAAKHGVAEYNMEYNETLKYEGIVRAWYMELKEGGLDYGFV 83

Query: 73  LKGINYLGRVKNYEAIVHDDIGATQKNTKLQ 103
           L+ ++ +GRV  Y+A+V +D G  +K  KL+
Sbjct: 84  LEAMDCVGRVNRYKAVVSEDKGGGEKIWKLK 114

[Close]

BLAST of CSPI07G06000 vs. NCBI nr
Match: XP_022927698.1 (uncharacterized protein LOC111434515 [Cucurbita moschata])

HSP 1 Score: 69.3 bits (168), Expect = 2.3e-08
Identity = 30/85 (35.29%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 5   SFVKVKGCDCSSNNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLND 64
           S V +   +     W +IP ++ P +QE++K AV  HN+ + + L+Y  +Y+ W+  L  
Sbjct: 503 SIVLIVSHEPQEKKWIKIPNVQVPLVQELAKFAVDEHNNKSGEGLKYVEVYDGWFMDLGQ 562

Query: 65  NTLEYRFLLKGINYLGRVKNYEAIV 89
           + +++RF LK  ++LGRV++YEA+V
Sbjct: 563 DNIKFRFHLKAKDWLGRVRSYEAVV 587

[Close]

BLAST of CSPI07G06000 vs. NCBI nr
Match: XP_023530188.1 (uncharacterized protein LOC111792827 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 68.6 bits (166), Expect = 3.9e-08
Identity = 36/98 (36.73%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 7   VKVKGCDCSS--NNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLND 66
           V  KGC        W +IP ++   LQ+++K AV+  N+   D L +D I+E WY +L  
Sbjct: 3   VSSKGCAQGEVVEKWIKIPDVKGHCLQQVAKFAVEKFNAEHGDCLIFDSIFEGWYLELGS 62

Query: 67  NTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKL 102
           N L+YR  +K I++LGR+  YEA+V ++    ++  KL
Sbjct: 63  NNLKYRLHIKAIDFLGRLLIYEAVVFEEKPDKERIRKL 100

[Close]

BLAST of CSPI07G06000 vs. NCBI nr
Match: XP_023530867.1 (uncharacterized protein LOC111793278 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-07
Identity = 28/85 (32.94%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 5   SFVKVKGCDCSSNNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLND 64
           S V +   +     W +IP ++ P +QE++K AV  HN+ + + L+Y  +Y+ W+  L  
Sbjct: 306 SIVLIVAPEPQEKKWIKIPNVQVPLVQELAKFAVDEHNNKSGEGLKYVEVYDGWFMDLGK 365

Query: 65  NTLEYRFLLKGINYLGRVKNYEAIV 89
           + +++R  LK  ++LGR+++YEA+V
Sbjct: 366 DNIKFRLHLKAKDWLGRIRSYEAVV 390

The following BLAST results are available for this feature:

BLAST of CSPI07G06000 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G06000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K639	5.4e-56	100.00	PP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G066200 PE=4 SV...	[more]
A0A6J1ELQ9	1.1e-08	35.29	uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC1114345...	[more]
A0A6J1EIQ8	1.2e-07	34.69	uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC1114345...	[more]
A0A6J1JKF7	2.1e-07	36.46	uncharacterized protein LOC111486626 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JG70	2.1e-07	36.46	uncharacterized protein LOC111486626 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CSPI07G06000 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43762.1	1.1e-55	100.00	hypothetical protein Csa_017233 [Cucumis sativus]	[more]
KAG6571861.1	2.7e-09	36.26	Cysteine proteinase inhibitor 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022927698.1	2.3e-08	35.29	uncharacterized protein LOC111434515 [Cucurbita moschata]	[more]
XP_023530188.1	3.9e-08	36.73	uncharacterized protein LOC111792827 [Cucurbita pepo subsp. pepo]	[more]
XP_023530867.1	1.9e-07	32.94	uncharacterized protein LOC111793278 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI07G06000 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009994	Phloem filament PP1	PFAM	PF07430	PP1	coord: 28..99 e-value: 1.2E-17 score: 63.7
None	No IPR available	GENE3D	3.10.450.10		coord: 16..106 e-value: 4.7E-7 score: 31.7
None	No IPR available	PANTHER	PTHR47116:SF5	PHLOEM FILAMENT PROTEIN	coord: 7..105
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 18..95
IPR027214	Cystatin	PANTHER	PTHR47116	PHLOEM FILAMENT PROTEIN	coord: 7..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G06000.1	CSPI07G06000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010951	negative regulation of endopeptidase activity
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity