CSPI07G04840 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G04840
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Rab family
Location	Chr7: 3590326 .. 3593846 (-)
RNA-Seq Expression	CSPI07G04840
Synteny	CSPI07G04840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATTTTCTCGTTTGTTCTTGAAGTACAGTACAAAATTCAAATTCACTGTCTTTCCCTTTGCTTTTTCCATAGCTCCCGAACAAAGACCTCCACTAAAACGAAGACAAAAGTTTTCTTTTTTATATACGTACACAATTACTTTTCGTTTCCTTTTATTGTGGGTATTCCCAATTTTCTTCGGTTTCGAAGAACGAAGTGAGAAATCTAGAGGAAGAGTCTTATGGCTGGTTATAAAGGTCATGATGAGTATGATTATCTGTTTAAGCTTGTTTTGATCGGTGATTCTGGTGTGGGCAAATCAAACTTGCTCTCCAGATTTACAAGGAATCAATTTAATTTAGAATCAAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGATACTGCTGGACAAGAAAGGTTTGCTTATTCCTTCTTCTTTTTTCAAGTTCCAATCCATTTTAGTCAACTAAATTGACGGTATCTCTCAAAATTCCTATTACCCTTCCATGATTTCTTTGCCTTCGTATCAATTGAATGAGAATCACGTCGATATATTCTACAGTTATTTGAAATTTGGTGGGATGATTCTTTTTGGACTGCCTTTACCTTTATTTTGTGATTAAAGGAAGAGGGAGGGTTATTTGTGGACTAAATCGTAAGGTATGAGGCAAAGGAAGAACTCCCTTGATTTTACTGCTGTCATTTATTATCTGATGGTCATGTGATGTAGAAGCTGGTTCTGTTCAAGTTTCATGCGTTGAGGAAGTACTCTGTTTTCCCCTCCACTACTTGTATGTACCCAACATGTTTGTATGCTTGCAGTTTGATTGTGATTGGCAGAATGCTTTCTAATCGTAGCAATAGTTGCAAATTAGTCTTATCATGAAGGTGGTTTATCCTTGAAAATCTGGTGGCCTTCAAGAGTTTAGTTTATCTTACATACTTTGAAATTAGTATTGAACAGTGAATAATGAAATTTTTATTGAAGTATTGATACACTTAAACTTATCATAATCCATCAGTTTAAGCTTTAAGTTCATCTGTGATTTAACATGATATTAGGGTAGGAGGTGTTGCGTTGGAACTCATGTAATGTTATTTCTTCCTCCAAATTAATATTGATTTCCATTTGTTGAGTTCTACAAATTTCTAAGCCTACAAGTGAGGTAGAGGGTTGATATGTTTAAACCTACAGTAAATGTTAGCTTAAGTTATTGGGTTTGTCAACAATTTCCATGGGGAGTGAGTACATAATTGGTATCATTTGCAATTGGAATGGTGTTGTTTTCGGTTTTGTTAGTACTTGTTCGGTTGTTCTAGTTTTTATTTGCTTGTCCATTTGAGGAACTTGTGGCATCATTGCATAGAAATGGAGCCTCTCAGATATTTTTTTCTTCTAGAGATAAGGAATTGTTCCATTTCCTCCTAGGTTGGTGTTCAAAGTGTCCTGATCAAATGAAGCCGGTGTAGACTACTTGTCTTGTCTCCCTGAAACAAAATTCTCATCTGTTCAATATCCATACTACCTTCTTAATAGTTATGGGTCAAAATAAATACAATGGTCTAGTGTGATCTTAGAATTGTAGCCTAGTTCAAACTTCAAGGCTTTTCTTTACTGAACTTTAAACAGCCACTAGAATCTGAGACCATTTATCGAAATGTGCAGAAGCTGGCAACTAATAGTTTCTATATTGCCAAAGTGAATTCTGCTCAATGGTATTAGCATATGACCTCCATACCAAGAGGTCAGAGGGTTCAATGGCTCCCTTCGTAATTGTTGTCTCTAAAAAGTATAGTTTCTATATTTGTGCAAGGGTTCTGTAGGTCCATAACAATAACGAGCACAAGTAATTGTGTGACGTTTTGTGATATATACTCATATCAAATAAAGCAGGGAAGTTTATTGGTAGTATGGACATGCTGAAGCTGGCATCTAAGGATTATTTATCACATTAGTATAAGGGCTAGGTGTATTGACACAAGTAGTTGTTTGAACTCTGAGTAATTTTTTACTTGACATATATATCATATAAATCATATGAGATGTGTTATACTGTGCTTAACTTAATCTGGTTAGTCATTTGAGGTTTTCTTTTCTACCTCAATTGAGGGTTGAAATTCTTTTGTTCATTATGATTTTCATTTTTGATAAGATTGTTTTTTCGTTAACTAACTATTCCTGAGATTATTAACTGTTGAAAAACATCAATCCAAATCCATTGGATTGGTAGGTGGTGTGGGGGTGAGGTGGATTAGAAAATTCTATGCTTCTGGATGTTCTAGTCCATTTTGTAATATTCATGTGAATAGAAATATAAAGTTTTTCTTAATTTGCTTGCCACCGCAGAAGGGTTAAACAACTTCCAACTTGTAGTTTCCAATATAATTTTAGTTGCTCAACTAGCTAACCTTGGGTCCACTTGACTGAGCCTTCGCTTTGTACTTTTTCCCCTCCTATTTAACTCAATAATTGACTGGAAGTTTTATGGGACTTCTTCTTTGTTGGTTTTATTTTATTTTTTGTACGAGAATAAGGGCCTCTTTGGAATGACTCTTCAAGTGCTTTGAAAAGTCATTCCAAACTTGCCCAAGCTCTAAATCATCTGGCTGCGTTCATAATTGAGGTTTATATGATTTTCATTCAAATAAAAGTTGTTGAGGACAGTATGTATGGGCATACTCTCATAGCTATATGGATTTGTAGTTATAACTTCAAAGATCATTAATTCAGATTGATTCTTTCTTTGTAGGTACCGAGCGATAACCAGTGCTTACTACCGTGGGGCAGTAGGTGCTTTGCTCGTGTACGATGTCACTCGACGTCCAACATTTGAAAATGCTGCAAGATGGTTAAAGGAATTAAGGGATCACACAGACCCAAACATGGTAGTGATGCTAATTGGCAACAAATGTGATTTACGACACCTTACTCTTGTTCCAACAGAAGATGGAAAATCATTTGCTGAGAGGGAGTCTTTGTACTTCATGGAGACCTCTGCATTGGATGCAACAAACGTTGAAAGCGCTTTCACAGAGGTACTCTCTCAAATATATCGAATCGTGAGCAGGAGATCAGTTGAGGCAGGCGATATTGGAAGTGCTTCAACGACACTCCCGTCTAAAGGTCAGACAATAGATGTCAAGGATGACTCGTCAGTGCTGAAGAGAATTGGATGCTGCTCCAGCTGAGATGAAATAAGCTTCAAAACCTCAACTTGGAAATACAGCAAGAGATATTTCTTTTGTATATTTGTATTGTATCAGTTTGTGTAGAATAAAGAGCTTGGTTGTGGGTGGTGGTTGTGTGAAAGGCGCTTTTCTTGATGTGTTATAGTCCCTCCACATAAGTGTTGGAGTTTGCTCTTCTTTACATTCCAAAGAACATTTGAAACTTGAAATTTACCGTTGTAATGCTGAACTTTGTACATATTTTCTTGTTTCAAATGCACCCAAAATAATTTCAATTATCCCCTTAAAATTGATGTTTTAATTTTC

mRNA sequence

CACATTTTCTCGTTTGTTCTTGAAGTACAGTACAAAATTCAAATTCACTGTCTTTCCCTTTGCTTTTTCCATAGCTCCCGAACAAAGACCTCCACTAAAACGAAGACAAAAGTTTTCTTTTTTATATACGTACACAATTACTTTTCGTTTCCTTTTATTGTGGGTATTCCCAATTTTCTTCGGTTTCGAAGAACGAAGTGAGAAATCTAGAGGAAGAGTCTTATGGCTGGTTATAAAGGTCATGATGAGTATGATTATCTGTTTAAGCTTGTTTTGATCGGTGATTCTGGTGTGGGCAAATCAAACTTGCTCTCCAGATTTACAAGGAATCAATTTAATTTAGAATCAAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGATACTGCTGGACAAGAAAGGTACCGAGCGATAACCAGTGCTTACTACCGTGGGGCAGTAGGTGCTTTGCTCGTGTACGATGTCACTCGACGTCCAACATTTGAAAATGCTGCAAGATGGTTAAAGGAATTAAGGGATCACACAGACCCAAACATGGTAGTGATGCTAATTGGCAACAAATGTGATTTACGACACCTTACTCTTGTTCCAACAGAAGATGGAAAATCATTTGCTGAGAGGGAGTCTTTGTACTTCATGGAGACCTCTGCATTGGATGCAACAAACGTTGAAAGCGCTTTCACAGAGGTACTCTCTCAAATATATCGAATCGTGAGCAGGAGATCAGTTGAGGCAGGCGATATTGGAAGTGCTTCAACGACACTCCCGTCTAAAGGTCAGACAATAGATGTCAAGGATGACTCGTCAGTGCTGAAGAGAATTGGATGCTGCTCCAGCTGAGATGAAATAAGCTTCAAAACCTCAACTTGGAAATACAGCAAGAGATATTTCTTTTGTATATTTGTATTGTATCAGTTTGTGTAGAATAAAGAGCTTGGTTGTGGGTGGTGGTTGTGTGAAAGGCGCTTTTCTTGATGTGTTATAGTCCCTCCACATAAGTGTTGGAGTTTGCTCTTCTTTACATTCCAAAGAACATTTGAAACTTGAAATTTACCGTTGTAATGCTGAACTTTGTACATATTTTCTTGTTTCAAATGCACCCAAAATAATTTCAATTATCCCCTTAAAATTGATGTTTTAATTTTC

Coding sequence (CDS)

ATGGCTGGTTATAAAGGTCATGATGAGTATGATTATCTGTTTAAGCTTGTTTTGATCGGTGATTCTGGTGTGGGCAAATCAAACTTGCTCTCCAGATTTACAAGGAATCAATTTAATTTAGAATCAAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGATACTGCTGGACAAGAAAGGTACCGAGCGATAACCAGTGCTTACTACCGTGGGGCAGTAGGTGCTTTGCTCGTGTACGATGTCACTCGACGTCCAACATTTGAAAATGCTGCAAGATGGTTAAAGGAATTAAGGGATCACACAGACCCAAACATGGTAGTGATGCTAATTGGCAACAAATGTGATTTACGACACCTTACTCTTGTTCCAACAGAAGATGGAAAATCATTTGCTGAGAGGGAGTCTTTGTACTTCATGGAGACCTCTGCATTGGATGCAACAAACGTTGAAAGCGCTTTCACAGAGGTACTCTCTCAAATATATCGAATCGTGAGCAGGAGATCAGTTGAGGCAGGCGATATTGGAAGTGCTTCAACGACACTCCCGTCTAAAGGTCAGACAATAGATGTCAAGGATGACTCGTCAGTGCTGAAGAGAATTGGATGCTGCTCCAGCTGA

Protein sequence

MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSRRSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS*

Homology

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BLAST of CSPI07G04840 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.6e-104
Identity = 190/219 (86.76%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           M GY+  DEYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+L +D K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNK DLRHL  VPTEDGKSFAERESLYFMETSAL+ATNVE+AFTEVL+QIYRIVS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           R+VEAGD GS S+ LPSKGQTI+VK+DSSVLKR GCCS+
Sbjct: 181 RAVEAGDSGS-SSGLPSKGQTINVKEDSSVLKRFGCCST 218

[Close]

BLAST of CSPI07G04840 vs. ExPASy Swiss-Prot
Match: Q40195 (Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.7e-99
Identity = 184/219 (84.02%), Postives = 199/219 (90.87%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYK  DEYDYLFKLVLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFATKSL IDGK
Sbjct: 1   MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFE A RWLKELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNK DLRHL  V TEDGK+FAE+ESLYFMETSAL+ATNVE+AF+EVL+QIYRIVS+
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           R+VEAGD  S S  +PS+GQTI+V +DSSVL R  CCS+
Sbjct: 181 RAVEAGDRPSTS-VVPSQGQTINVNEDSSVLNRYRCCSN 218

[Close]

BLAST of CSPI07G04840 vs. ExPASy Swiss-Prot
Match: P28185 (Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.5e-97
Identity = 175/219 (79.91%), Postives = 199/219 (90.87%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+ +++GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR  TFENAARWL+ELR HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL  V TE+ K+FAERESLYFMETSALDATNVE+AFTEVL+QI++IVS+
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSV   D G  S  LP KG+TI+VK+D SVLKR+GCCS+
Sbjct: 181 RSV---DGGGESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of CSPI07G04840 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.3e-95
Identity = 173/219 (79.00%), Postives = 194/219 (88.58%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  DEYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATKSL ID K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  T+EN  RWLKELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNK DLRHL  V T++ K  AERE LYFMETSAL+ATNVE+AFTE L+QIYRIVS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           ++VEAGD G A+++ P KG+TI++KD+ S  K+ GCCSS
Sbjct: 181 KAVEAGDEG-ATSSAPPKGETINIKDEGSSWKKFGCCSS 218

[Close]

BLAST of CSPI07G04840 vs. ExPASy Swiss-Prot
Match: P40393 (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2)

HSP 1 Score: 346.7 bits (888), Expect = 2.0e-94
Identity = 169/217 (77.88%), Postives = 194/217 (89.40%), Query Frame = 0


Query: 2   AGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKV 61
           AGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+SL++DGKV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVV 121
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWLKELRDHTDPN+VV
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 122 MLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSRR 181
           ML+GNK DLRHL  V T++GK+FAERESLYFMETSAL++TNVE+AF EVL+QIYRIVS+R
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 182 SVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCS 219
           SVEAGD   +    P KG+ I++KDD S +K+ GCCS
Sbjct: 183 SVEAGDDAGSG---PGKGEKINIKDDVSAVKKGGCCS 216

[Close]

BLAST of CSPI07G04840 vs. ExPASy TrEMBL
Match: A0A0A0K737 (Small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G049180 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.7e-117
Identity = 217/219 (99.09%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVS+
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CSPI07G04840 vs. ExPASy TrEMBL
Match: A0A5A7SMX1 (Ras-related protein Rab11D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003220 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 8.5e-117
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVS+
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSVEAGDIGSAS TLPSKGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASMTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CSPI07G04840 vs. ExPASy TrEMBL
Match: A0A1S3C059 (ras-related protein Rab11D OS=Cucumis melo OX=3656 GN=LOC103495492 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.4e-116
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELR+HTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRNHTDPNMV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVS+
Sbjct: 121 VMLIGNKCDLRHLVLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSVEAGDIGSAS TLP KGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASMTLPPKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CSPI07G04840 vs. ExPASy TrEMBL
Match: A0A6J1GMB1 (ras-related protein Rab11D-like OS=Cucurbita moschata OX=3662 GN=LOC111455574 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 207/219 (94.52%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL LVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVS+
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSVEA D GSAS TLP+KGQTIDVKDDSS+L+RIGCCSS
Sbjct: 181 RSVEASDSGSASVTLPTKGQTIDVKDDSSILRRIGCCSS 219

[Close]

BLAST of CSPI07G04840 vs. ExPASy TrEMBL
Match: A0A6J1I228 (ras-related protein Rab11D-like OS=Cucurbita maxima OX=3661 GN=LOC111468314 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.7e-112
Identity = 206/219 (94.06%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL LVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVL+QIYRIVS+
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLNQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSVEA D GSAS TLPSKG+TIDVKDDSS+L+RIGCCSS
Sbjct: 181 RSVEASDSGSASVTLPSKGKTIDVKDDSSILRRIGCCSS 219

[Close]

BLAST of CSPI07G04840 vs. NCBI nr
Match: XP_004136835.1 (ras-related protein Rab11D [Cucumis sativus] >KGN43636.1 hypothetical protein Csa_017337 [Cucumis sativus])

HSP 1 Score: 431.8 bits (1109), Expect = 3.6e-117
Identity = 217/219 (99.09%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVS+
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CSPI07G04840 vs. NCBI nr
Match: KAA0031553.1 (ras-related protein Rab11D [Cucumis melo var. makuwa] >TYK07006.1 ras-related protein Rab11D [Cucumis melo var. makuwa])

HSP 1 Score: 429.5 bits (1103), Expect = 1.8e-116
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVS+
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSVEAGDIGSAS TLPSKGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASMTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CSPI07G04840 vs. NCBI nr
Match: XP_008455291.1 (PREDICTED: ras-related protein Rab11D [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELR+HTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRNHTDPNMV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVS+
Sbjct: 121 VMLIGNKCDLRHLVLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSVEAGDIGSAS TLP KGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASMTLPPKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CSPI07G04840 vs. NCBI nr
Match: XP_038888615.1 (ras-related protein Rab11D [Benincasa hispida])

HSP 1 Score: 422.5 bits (1085), Expect = 2.2e-114
Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYK HDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKAHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIV +
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVCK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSVE GDIGSASTTLP++GQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVETGDIGSASTTLPARGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CSPI07G04840 vs. NCBI nr
Match: XP_023553765.1 (ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417.5 bits (1072), Expect = 6.9e-113
Identity = 208/219 (94.98%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL LVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVS+
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSVEA DIGSAS TLPSKGQTIDVKDDSS+L++IGCCSS
Sbjct: 181 RSVEASDIGSASMTLPSKGQTIDVKDDSSILRKIGCCSS 219

[Close]

BLAST of CSPI07G04840 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 356.3 bits (913), Expect = 1.8e-98
Identity = 175/219 (79.91%), Postives = 199/219 (90.87%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+ +++GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR  TFENAARWL+ELR HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VMLIGNKCDLRHL  V TE+ K+FAERESLYFMETSALDATNVE+AFTEVL+QI++IVS+
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSV   D G  S  LP KG+TI+VK+D SVLKR+GCCS+
Sbjct: 181 RSV---DGGGESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of CSPI07G04840 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 345.5 bits (885), Expect = 3.1e-95
Identity = 169/219 (77.17%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFAT++L++DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFEN  RWLKEL++HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VML+GNK DLRHL  VPTEDGKS+AE+ESL FMETSAL+ATNVE AF EVL+QIYRI S+
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           + VEAG+ G+AS     KG+ I+VK+D S LK++GCCS+
Sbjct: 181 KQVEAGEDGNASV---PKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of CSPI07G04840 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 332.4 bits (851), Expect = 2.7e-91
Identity = 165/219 (75.34%), Postives = 189/219 (86.30%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  DEYDYLFK+VLIGDSGVGKSNLLSRFT+N+F+LESKSTIGVEFAT+SL +D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN   WLKELR+HTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VML+GNK DLRHL  V TED KSFAE+ESLYFMETSAL+ATNVE+AF EVL+QI+ IVS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           +++EA    S S  +PSKG  ID+  D S +K+ GCCS+
Sbjct: 181 KAMEA---ASESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of CSPI07G04840 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 332.0 bits (850), Expect = 3.6e-91
Identity = 165/219 (75.34%), Postives = 192/219 (87.67%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+SL ++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWL+ELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           VML+GNK DLRHL  V TED KSFAE ESLYFMETSAL++TNVE+AF+EVL+QIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           +++EAG+    S  +PSKG+ IDV  D S +K+ GCCS+
Sbjct: 181 KAMEAGE---DSGNVPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of CSPI07G04840 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 327.8 bits (839), Expect = 6.7e-90
Identity = 163/221 (73.76%), Postives = 190/221 (85.97%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MA Y+  DEYDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+S+ +D K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWLKELRDHTD N+V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 VMLIGNKCDLRHLTLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSR 180
           +M +GNK DLRHL  V TED K+FAERE+ +FMETSAL++ NVE+AFTEVLSQIYR+VSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDV--KDDSSVLKRIGCCSS 220
           +++   DIG     LP KGQTI+V  KDD S +K++GCCS+
Sbjct: 181 KAL---DIGDDPAALP-KGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of CSPI07G04840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40194	1.6e-104	86.76	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q40195	2.7e-99	84.02	Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1	[more]
P28185	2.5e-97	79.91	Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1	[more]
Q01111	2.3e-95	79.00	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
P40393	2.0e-94	77.88	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 S...	[more]

BLAST of CSPI07G04840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K737	1.7e-117	99.09	Small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G049180 PE=4 SV=1	[more]
A0A5A7SMX1	8.5e-117	98.63	Ras-related protein Rab11D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3C059	9.4e-116	97.72	ras-related protein Rab11D OS=Cucumis melo OX=3656 GN=LOC103495492 PE=4 SV=1	[more]
A0A6J1GMB1	1.3e-112	94.52	ras-related protein Rab11D-like OS=Cucurbita moschata OX=3662 GN=LOC111455574 PE...	[more]
A0A6J1I228	3.7e-112	94.06	ras-related protein Rab11D-like OS=Cucurbita maxima OX=3661 GN=LOC111468314 PE=4...	[more]

BLAST of CSPI07G04840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136835.1	3.6e-117	99.09	ras-related protein Rab11D [Cucumis sativus] >KGN43636.1 hypothetical protein Cs...	[more]
KAA0031553.1	1.8e-116	98.63	ras-related protein Rab11D [Cucumis melo var. makuwa] >TYK07006.1 ras-related pr...	[more]
XP_008455291.1	2.0e-115	97.72	PREDICTED: ras-related protein Rab11D [Cucumis melo]	[more]
XP_038888615.1	2.2e-114	96.35	ras-related protein Rab11D [Benincasa hispida]	[more]
XP_023553765.1	6.9e-113	94.98	ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI07G04840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06400.1	1.8e-98	79.91	Ras-related small GTP-binding family protein	[more]
AT1G16920.1	3.1e-95	77.17	RAB GTPase homolog A1B	[more]
AT5G45750.1	2.7e-91	75.34	RAB GTPase homolog A1C	[more]
AT4G18800.1	3.6e-91	75.34	RAB GTPase homolog A1D	[more]
AT5G60860.1	6.7e-90	73.76	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 152..174 score: 41.19 coord: 14..35 score: 56.68 coord: 55..77 score: 55.43 coord: 117..130 score: 50.41 coord: 37..53 score: 35.85
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 7.2E-27 score: 105.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 1.4E-109 score: 380.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..211 e-value: 5.9E-5 score: 21.4
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 1..219
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..219
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..178 score: 9.562506
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..217 score: 35.397194
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 1.27085E-127 score: 354.944
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 3.6E-12 score: 36.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 2.4E-61 score: 206.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 8..211 score: 16.280527
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 2.1E-38 score: 129.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..217 e-value: 3.5E-70 score: 237.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G04840.1	CSPI07G04840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding