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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTACAGGGTGTGTACCCGTGGAGAATTTGAAGAATTTCTCTCAGAAATTGAAAAACTTCCTTCACAAAAGTTGAAGAGAATCGAGTACGAAAGGTTCTCGAGGGCTACTGGAGAAGAGCAAATTCAGGAAGGATTGCTTAGGCAGTTTTTCTTTTTTCTTTTTGGTTTAACAGAGCAATTGGATTTTCTGAAATTTGGGATTGCAGGAGGTAATTTGGGAACTCTGACCTATTGAGTAATTTAATTTAAAAGTAGTTAATGAGTTTTGTGGAAGAAATTTTTAGAGGTTTTGAGGTTGGATTGGATGAAATCGAAGCTTAACATCTTGAAAGAAGCTGCTGAAAAATAG mRNA sequence ATGTACAGGGTGTGTACCCGTGGAGAATTTGAAGAATTTCTCTCAGAAATTGAAAAACTTCCTTCACAAAAGTTGAAGAGAATCGAGTACGAAAGGTTCTCGAGGGCTACTGGAGAAGAGCAAATTCAGGAAGGATTGCTTAGGCAGTTTTTCTTTTTTCTTTTTGGTTTAACAGAGCAATTGGATTTTCTGAAATTTGGGATTGCAGGAGAGGTTTTGAGGTTGGATTGGATGAAATCGAAGCTTAACATCTTGAAAGAAGCTGCTGAAAAATAG Coding sequence (CDS) ATGTACAGGGTGTGTACCCGTGGAGAATTTGAAGAATTTCTCTCAGAAATTGAAAAACTTCCTTCACAAAAGTTGAAGAGAATCGAGTACGAAAGGTTCTCGAGGGCTACTGGAGAAGAGCAAATTCAGGAAGGATTGCTTAGGCAGTTTTTCTTTTTTCTTTTTGGTTTAACAGAGCAATTGGATTTTCTGAAATTTGGGATTGCAGGAGAGGTTTTGAGGTTGGATTGGATGAAATCGAAGCTTAACATCTTGAAAGAAGCTGCTGAAAAATAG Protein sequence MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQLDFLKFGIAGEVLRLDWMKSKLNILKEAAEK*
Homology
BLAST of CSPI07G04810 vs. ExPASy TrEMBL
Match: A0A0A0K2D6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049150 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.2e-42 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query: 1 MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ 60
MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ
Sbjct: 1 MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ 60
Query: 61 LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK 92
LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK
Sbjct: 61 LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK 91
BLAST of CSPI07G04810 vs. NCBI nr
Match: KGN43633.1 (hypothetical protein Csa_017150 [Cucumis sativus]) HSP 1 Score: 181.0 bits (458), Expect = 4.6e-42 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query: 1 MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ 60
MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ
Sbjct: 1 MYRVCTRGEFEEFLSEIEKLPSQKLKRIEYERFSRATGEEQIQEGLLRQFFFFLFGLTEQ 60
Query: 61 LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK 92
LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK
Sbjct: 61 LDFLKFGIAGEVLRLDWMKSKLNILKEAAEK 91
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K2D6 | 2.2e-42 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049150 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN43633.1 | 4.6e-42 | 100.00 | hypothetical protein Csa_017150 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 78..91 |
Relationships
The following mRNA feature(s) are a part of this gene:
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