CSPI07G04280 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G04280
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Wound-responsive family protein
Location	Chr7: 3258116 .. 3258651 (+)
RNA-Seq Expression	CSPI07G04280
Synteny	CSPI07G04280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTCCACTCTCCACGTGTTTCTGAAAAACAAAACAAAACCAGGGGGCGCGATTTTCCCATCTATAATAATCTAATCTATTACAGTTCTATATATAATGAGCAAATCCCAATTCATTTTCAAGCATCCAAAATTCAAAAACACACAGATACCAAAAAAATGAGTTGTTGCAGAAAAGGTTGGGTTGTAGCTGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCGCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCAGCCGCGGTTTCCGATCACAAATGGAACCAATCAGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGCCCCAATAACTGATCGTTCCACATCACATATACCTTTTTTCTTTACTCTATTAGATTACTGTTGTGTATATGTATATATATCCACTTCAATTCAAAATCAATGGAAGAGTTTTTCTTAATCATATTTTGTTT

mRNA sequence

CCCCTCCACTCTCCACGTGTTTCTGAAAAACAAAACAAAACCAGGGGGCGCGATTTTCCCATCTATAATAATCTAATCTATTACAGTTCTATATATAATGAGCAAATCCCAATTCATTTTCAAGCATCCAAAATTCAAAAACACACAGATACCAAAAAAATGAGTTGTTGCAGAAAAGGTTGGGTTGTAGCTGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCGCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCAGCCGCGGTTTCCGATCACAAATGGAACCAATCAGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGCCCCAATAACTGATCGTTCCACATCACATATACCTTTTTTCTTTACTCTATTAGATTACTGTTGTGTATATGTATATATATCCACTTCAATTCAAAATCAATGGAAGAGTTTTTCTTAATCATATTTTGTTT

Coding sequence (CDS)

ATGAGTTGTTGCAGAAAAGGTTGGGTTGTAGCTGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCGCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCAGCCGCGGTTTCCGATCACAAATGGAACCAATCAGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGCCCCAATAACTGA

Protein sequence

MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAVSDHKWNQSEESLRTVMYLSCWGPNN*

Homology

[Close]

BLAST of CSPI07G04280 vs. ExPASy TrEMBL
Match: A0A0A0K3P5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046670 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.7e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SDHKWNQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of CSPI07G04280 vs. ExPASy TrEMBL
Match: A0A5D3C714 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003720 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.3e-40
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of CSPI07G04280 vs. ExPASy TrEMBL
Match: A0A1S3C0Q4 (uncharacterized protein LOC103495542 OS=Cucumis melo OX=3656 GN=LOC103495542 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAA V
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of CSPI07G04280 vs. ExPASy TrEMBL
Match: A0A6J1GJQ8 (uncharacterized protein LOC111454919 OS=Cucurbita moschata OX=3662 GN=LOC111454919 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35
Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS  R+ WVVAASVGVVEALKDQG+CRWNH I+S+QQYAKNHVRS+SQAKKLSSPS AAV
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHAIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SD KW QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of CSPI07G04280 vs. ExPASy TrEMBL
Match: A0A6J1HXF9 (uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.5e-35
Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS  R+ WVVAASVGVVEALKDQG+CRWNHTI+S+QQYAKNHVRS+SQAKKLSS S AAV
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSTSTAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SD KW QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of CSPI07G04280 vs. NCBI nr
Match: XP_004136809.1 (uncharacterized protein LOC101202743 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 5.6e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SDHKWNQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of CSPI07G04280 vs. NCBI nr
Match: KAA0031602.1 (uncharacterized protein E6C27_scaffold139G003700 [Cucumis melo var. makuwa] >TYK07054.1 uncharacterized protein E5676_scaffold13G003720 [Cucumis melo var. makuwa])

HSP 1 Score: 173.3 bits (438), Expect = 8.9e-40
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of CSPI07G04280 vs. NCBI nr
Match: XP_008455355.1 (PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 2.6e-39
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAA V
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of CSPI07G04280 vs. NCBI nr
Match: XP_038888492.1 (uncharacterized protein LOC120078325 [Benincasa hispida])

HSP 1 Score: 164.9 bits (416), Expect = 3.2e-37
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC R+ WVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRS+SQA+KLSSPSA AV
Sbjct: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SD KW QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of CSPI07G04280 vs. NCBI nr
Match: XP_023554652.1 (uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo] >KAG6572338.1 hypothetical protein SDJN03_29066, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011949.1 hypothetical protein SDJN02_26857, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35
Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS  R+ WVVAASVGVVEALKDQG+CRWNHTI+S+QQYAKNHVRS+SQAKKLSSPS AAV
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 86
          SD KW QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of CSPI07G04280 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-24
Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQ-GICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAA 60
          MS   K W+VAAS+G VEALKDQ G+CRWN+ IRS  QY +N++RS+SQAKKLSS S   
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDY 60

Query: 61 VSDHKWNQSEESLRTVMYLSCWGPN 85
             +K  Q+EESLRTVMYLSCWGP+
Sbjct: 61 T--NKTKQAEESLRTVMYLSCWGPS 83

[Close]

BLAST of CSPI07G04280 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 104.0 bits (258), Expect = 6.2e-23
Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 1  MSCCRKGWVVAASVGVVEALKDQ-GICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAA 60
          MS   K W VA S+G VEALKDQ G+CRWN+ +RS+ Q+ +N+VRS+SQ K+ SS S +A
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 V-----SDHKWNQSEESLRTVMYLSCWGPN 85
                   K  ++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of CSPI07G04280 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 55.5 bits (132), Expect = 2.5e-08
Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 0


Query: 8  WVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSP----SAAAVSDH 67
          W VA ++  VE LKDQG+ RWN+  R L + A   VR+I+   + S P    SA ++   
Sbjct: 9  WAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSK 68

Query: 68 KWNQS--EESLRTVMYLSCWGP 84
            + +  E S    M LSC+GP
Sbjct: 69 PLSTTPFETSFEKAMGLSCFGP 90

The following BLAST results are available for this feature:

BLAST of CSPI07G04280 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G04280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3P5	2.7e-42	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046670 PE=4 SV=1	[more]
A0A5D3C714	4.3e-40	96.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C0Q4	1.3e-39	95.29	uncharacterized protein LOC103495542 OS=Cucumis melo OX=3656 GN=LOC103495542 PE=...	[more]
A0A6J1GJQ8	2.4e-35	85.88	uncharacterized protein LOC111454919 OS=Cucurbita moschata OX=3662 GN=LOC1114549...	[more]
A0A6J1HXF9	5.5e-35	85.88	uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355...	[more]

BLAST of CSPI07G04280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136809.1	5.6e-42	100.00	uncharacterized protein LOC101202743 [Cucumis sativus]	[more]
KAA0031602.1	8.9e-40	96.47	uncharacterized protein E6C27_scaffold139G003700 [Cucumis melo var. makuwa] >TYK...	[more]
XP_008455355.1	2.6e-39	95.29	PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo]	[more]
XP_038888492.1	3.2e-37	90.59	uncharacterized protein LOC120078325 [Benincasa hispida]	[more]
XP_023554652.1	1.3e-35	87.06	uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo] >KAG6572338.1 ...	[more]

BLAST of CSPI07G04280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10265.1	1.9e-24	64.71	Wound-responsive family protein	[more]
AT4G10270.1	6.2e-23	56.67	Wound-responsive family protein	[more]
AT4G33560.1	2.5e-08	37.80	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 10..83 e-value: 8.4E-33 score: 113.2
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 1..84
None	No IPR available	PANTHER	PTHR33090:SF50	FAMILY PROTEIN, PUTATIVE-RELATED	coord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G04280.1	CSPI07G04280.1	mRNA