CSPI07G04240 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G04240
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Equilibrative nucleoside transporter 2-like
Location	Chr7: 3248420 .. 3249056 (+)
RNA-Seq Expression	CSPI07G04240
Synteny	CSPI07G04240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTTGGAGAGCCCAAATTTGCCACTTCTAAAATCCTCTCTCTCTAAACAAATTGGTGACAATTTTTCTTCATGGCTGGTGAGCAACAACAGTATACGACTAACTTCAATTCTAATTCCTCCATCAAAACTAACTTCTCTATTTATCCTAATCATACTTCTAGTAAGTATTCTTCTTCTTCTTCTTCCAAGTATCCCACCAAATTTTCTCACAATGGCTCCGTCTCTCAGGGTGAGAAAGACAAGATAAAAAAGGCTGAAGAGTCTCTTCGAACCGTCATGTATTTGAGTTGTTGGGGCCCTAATTCATGATGTGAAATTTTCATTCAAGAAATTAATCAAAGACTTGAAACATCATTGATGCAAGAAAAAATTTAAGACGGTATTTCAAACCCTACATCAGAGCGCACATGGTTATGAAACGAATCATATGTGTAATCAACTGTTATCCACGTCGGCGAAACATCCATATTGTGACAGGTGTTATTCATCTTTCACTTCTGATTTTTTTTAAGACTTTGTTAGTATAACTACTTAGTGGTGGATCGAAAAGGAGATGGTACATTAGAAGCTATCGAGAACCGAAAATGATGATGATTTAATTTTGAGCGTCTAACTTTGATACTCTACGAGGCA

mRNA sequence

ATTTTTTGGAGAGCCCAAATTTGCCACTTCTAAAATCCTCTCTCTCTAAACAAATTGGTGACAATTTTTCTTCATGGCTGGTGAGCAACAACAGTATACGACTAACTTCAATTCTAATTCCTCCATCAAAACTAACTTCTCTATTTATCCTAATCATACTTCTAGTAAGTATTCTTCTTCTTCTTCTTCCAAGTATCCCACCAAATTTTCTCACAATGGCTCCGTCTCTCAGGGTGAGAAAGACAAGATAAAAAAGGCTGAAGAGTCTCTTCGAACCGTCATGTATTTGAGTTGTTGGGGCCCTAATTCATGATGTGAAATTTTCATTCAAGAAATTAATCAAAGACTTGAAACATCATTGATGCAAGAAAAAATTTAAGACGGTATTTCAAACCCTACATCAGAGCGCACATGGTTATGAAACGAATCATATGTGTAATCAACTGTTATCCACGTCGGCGAAACATCCATATTGTGACAGGTGTTATTCATCTTTCACTTCTGATTTTTTTTAAGACTTTGTTAGTATAACTACTTAGTGGTGGATCGAAAAGGAGATGGTACATTAGAAGCTATCGAGAACCGAAAATGATGATGATTTAATTTTGAGCGTCTAACTTTGATACTCTACGAGGCA

Coding sequence (CDS)

ATGGCTGGTGAGCAACAACAGTATACGACTAACTTCAATTCTAATTCCTCCATCAAAACTAACTTCTCTATTTATCCTAATCATACTTCTAGTAAGTATTCTTCTTCTTCTTCTTCCAAGTATCCCACCAAATTTTCTCACAATGGCTCCGTCTCTCAGGGTGAGAAAGACAAGATAAAAAAGGCTGAAGAGTCTCTTCGAACCGTCATGTATTTGAGTTGTTGGGGCCCTAATTCATGA

Protein sequence

MAGEQQQYTTNFNSNSSIKTNFSIYPNHTSSKYSSSSSSKYPTKFSHNGSVSQGEKDKIKKAEESLRTVMYLSCWGPNS*

Homology

[Close]

BLAST of CSPI07G04240 vs. ExPASy TrEMBL
Match: A0A0A0K1Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MAGEQQQYTTNFNSNSSIKTNFSIYPNHTSSKYSSSSSSKYPTKFSHNGSVSQGEKDKIK 60
          MAGEQQQYTTNFNSNSSIKTNFSIYPNHTSSK SSSSSSKYPTKFSHNGSVSQGEKDKIK
Sbjct: 1  MAGEQQQYTTNFNSNSSIKTNFSIYPNHTSSK-SSSSSSKYPTKFSHNGSVSQGEKDKIK 60

Query: 61 KAEESLRTVMYLSCWGPNS 80
          KAEESLRTVMYLSCWGPNS
Sbjct: 61 KAEESLRTVMYLSCWGPNS 78

[Close]

BLAST of CSPI07G04240 vs. ExPASy TrEMBL
Match: M5WPM4 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G035300 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 29 TSSKYSSSSSSKYPTKFS---HNGSVSQGEKDKIKKAEESLRTVMYLSCWGPN 79
          +SS  SSSSSSK   +FS    +G+      DK+K+AEESLRTVMYLSCWGPN
Sbjct: 32 SSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 84

[Close]

BLAST of CSPI07G04240 vs. ExPASy TrEMBL
Match: A0A314U792 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_14189 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 29 TSSKYSSSSSSKYPTKFS---HNGSVSQGEKDKIKKAEESLRTVMYLSCWGPN 79
          +SS  SSS SSK   +FS    +G+V     DK+K+AEESLRTVMYLSCWGPN
Sbjct: 31 SSSSSSSSCSSKQAWRFSTSIDSGAVKAANSDKVKQAEESLRTVMYLSCWGPN 83

[Close]

BLAST of CSPI07G04240 vs. ExPASy TrEMBL
Match: A0A314YRJ3 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_13508 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 29 TSSKYSSSSSSKYPTKFS---HNGSVSQGEKDKIKKAEESLRTVMYLSCWGPN 79
          +SS  SSS SSK   +FS    +G+V     DK+K+AEESLRTVMYLSCWGPN
Sbjct: 31 SSSSSSSSCSSKQAWRFSSSIDSGAVKAANSDKVKQAEESLRTVMYLSCWGPN 83

[Close]

BLAST of CSPI07G04240 vs. ExPASy TrEMBL
Match: A0A5E4F7V9 (PREDICTED: wound-responsive family OS=Prunus dulcis OX=3755 GN=ALMOND_2B003799 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 29 TSSKYSSSSSSKYPTKFS---HNGSVSQGEKDKIKKAEESLRTVMYLSCWGPN 79
          +SS  SSSSSSK   +FS    +G+      DK+K+AEESLRTVMYLSCWGPN
Sbjct: 31 SSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 83

[Close]

BLAST of CSPI07G04240 vs. NCBI nr
Match: KGN43575.1 (hypothetical protein Csa_020190 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 2.2e-32
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MAGEQQQYTTNFNSNSSIKTNFSIYPNHTSSKYSSSSSSKYPTKFSHNGSVSQGEKDKIK 60
          MAGEQQQYTTNFNSNSSIKTNFSIYPNHTSSK SSSSSSKYPTKFSHNGSVSQGEKDKIK
Sbjct: 1  MAGEQQQYTTNFNSNSSIKTNFSIYPNHTSSK-SSSSSSKYPTKFSHNGSVSQGEKDKIK 60

Query: 61 KAEESLRTVMYLSCWGPNS 80
          KAEESLRTVMYLSCWGPNS
Sbjct: 61 KAEESLRTVMYLSCWGPNS 78

[Close]

BLAST of CSPI07G04240 vs. NCBI nr
Match: KAG6572336.1 (hypothetical protein SDJN03_29064, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.5 bits (153), Expect = 9.3e-07
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 20 TNFSI-YPNHTSSKYSSSSSSKYPTKFSHNGSVS----------QGEKDKIKKAEESLRT 79
          TN+S  +   +S+K+SSS+SSK    FS +GS S           GE+D+++KAEESLRT
Sbjct: 12 TNYSSDHSTSSSAKFSSSASSKQAITFSRDGSGSGSGSGSGAKHGGERDRLRKAEESLRT 71

[Close]

BLAST of CSPI07G04240 vs. NCBI nr
Match: VVA23499.1 (PREDICTED: wound-responsive family [Prunus dulcis])

HSP 1 Score: 58.2 bits (139), Expect = 3.9e-05
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 29  TSSKYSSSSSSKYPTKFS---HNGSVSQGEKDKIKKAEESLRTVMYLSCWGPN 79
           +SS  SSSSSSK   +FS    +G+      DK+K+AEESLRTVMYLSCWGPN
Sbjct: 110 SSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 162

[Close]

BLAST of CSPI07G04240 vs. NCBI nr
Match: VVA23500.1 (PREDICTED: wound-responsive family [Prunus dulcis])

HSP 1 Score: 58.2 bits (139), Expect = 3.9e-05
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 29 TSSKYSSSSSSKYPTKFS---HNGSVSQGEKDKIKKAEESLRTVMYLSCWGPN 79
          +SS  SSSSSSK   +FS    +G+      DK+K+AEESLRTVMYLSCWGPN
Sbjct: 31 SSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 83

[Close]

BLAST of CSPI07G04240 vs. NCBI nr
Match: ONI10223.1 (hypothetical protein PRUPE_4G035300 [Prunus persica])

HSP 1 Score: 58.2 bits (139), Expect = 3.9e-05
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 29 TSSKYSSSSSSKYPTKFS---HNGSVSQGEKDKIKKAEESLRTVMYLSCWGPN 79
          +SS  SSSSSSK   +FS    +G+      DK+K+AEESLRTVMYLSCWGPN
Sbjct: 32 SSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 84

[Close]

BLAST of CSPI07G04240 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 50.1 bits (118), Expect = 9.9e-07
Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 28 HTSSKYSSSSSSKYPTKFSHNGSV-SQGEKDKIKKAEESLRTVMYLSCWGPN 79
          H  +   S S  K  +  S + +V S GE +K KKAEESLRTVMYLSCWGPN
Sbjct: 39 HLRNNVRSVSQGKRFSSSSVSAAVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of CSPI07G04240 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 45.4 bits (106), Expect = 2.4e-05
Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 50 SVSQGEK---------DKIKKAEESLRTVMYLSCWGPN 79
          SVSQ +K         +K K+AEESLRTVMYLSCWGP+
Sbjct: 46 SVSQAKKLSSSSIDYTNKTKQAEESLRTVMYLSCWGPS 83

The following BLAST results are available for this feature:

BLAST of CSPI07G04240 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G04240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1Q2	1.1e-32	98.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1	[more]
M5WPM4	1.9e-05	60.38	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G035300 PE=4 SV=1	[more]
A0A314U792	1.9e-05	60.38	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_141...	[more]
A0A314YRJ3	1.9e-05	60.38	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_135...	[more]
A0A5E4F7V9	1.9e-05	60.38	PREDICTED: wound-responsive family OS=Prunus dulcis OX=3755 GN=ALMOND_2B003799 P...	[more]

BLAST of CSPI07G04240 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43575.1	2.2e-32	98.73	hypothetical protein Csa_020190 [Cucumis sativus]	[more]
KAG6572336.1	9.3e-07	53.52	hypothetical protein SDJN03_29064, partial [Cucurbita argyrosperma subsp. sorori...	[more]
VVA23499.1	3.9e-05	60.38	PREDICTED: wound-responsive family [Prunus dulcis]	[more]
VVA23500.1	3.9e-05	60.38	PREDICTED: wound-responsive family [Prunus dulcis]	[more]
ONI10223.1	3.9e-05	60.38	hypothetical protein PRUPE_4G035300 [Prunus persica]	[more]

BLAST of CSPI07G04240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10270.1	9.9e-07	55.77	Wound-responsive family protein	[more]
AT4G10265.1	2.4e-05	60.53	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 27..77 e-value: 2.9E-12 score: 47.4
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 2..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..50
None	No IPR available	PANTHER	PTHR33090:SF27	SUBFAMILY NOT NAMED	coord: 2..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G04240.1	CSPI07G04240.1	mRNA