CSPI07G03700 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G03700
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionThiF domain-containing protein
LocationChr7: 2921444 .. 2924501 (-)
RNA-Seq ExpressionCSPI07G03700
SyntenyCSPI07G03700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCTTTCAAAAGCGCTAAACAAATAAACAAATATAATTTCTCTATTTCTTTCTCTCTCTTCCTATTTTGTTTTCCCTCCACCCCTTTCCCGCCTCTCCTCTCCCTATCTCTCTCCATAAAATCCCCATTCTCCCTTCTCCATTCCCTCTCATCCTCAATTCTCATCTTCATCTCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATCTCTGCCACATCATGAATCGGAGATCCAGAAGATCGGGAAACTCTCAATCCGAGACGTTTCACAAGTATCTAAAGCCTGGTGCGCTAGCACAAATTCGGAATTCTCGAATGATCGCTCGATTCAATCGGGTTAATTTGGTCTCTCAGATCTACTCCGCTCCTTCCAGTCTTCCGATCGACTCCGCTTTACTTCAGGTCAACATTGTTGATGCTTCTCCTTCCTTTGCTGGGAGGGCGTATGGTCCTCTCTCTTTGCAGAGGAAGAAACTTTTGGCTTCCAAGTCTTTGTGGTTCCTCGCTTCTAGCCCTACTAATCTCACGCCTGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGGTGAACTGTACAAGTCTTCTTCTATGGAATACTTTCAACTTGTGAATCTAGTCTTTTTTTATGAAATTAAATATAACTGTAATACATGATACCTTTTGTAGGTAGTGTTGACGATGTGTTGTGAATTTTTTTTTCTTGGTTTTGATCGGATTTAAATAATAAGATCTATCATATTCTCGATCTATTGTGTTTACGACACCGAAGTCAGTTTTATTCTTCAGTTTTGTTTATCTTATCTACGCCATTCTATTAAACTTTTCTAAACTAGGGCTCATTTTGGACCTTAATGCTTGGGGCTTATGTTGAACTTCTGGTCAACTTTGGTCCTCGACTTATAAAGTAAGGGTTTAGAAGCATTTGCAAACTTCTTCCAGCAATTTCACCAATAATGCGGGTCAGTTTTCTCTTGTTTACTTGGTTTGTTCAGTAACTGCTTTATAGTTATAAAATTTTATGTGGAGCAAGACCAAGGGTTTTTGACCATGGAAGGATTCACGCCTTCAATTATATATTGATGATGTTATAAATTGTTCGAAGATATTTATTTCATTTTGCTGGAGTTTGTAGTCTGCAAAGTCTATAGATTGAGAAACAAATACCAAATCTAGGTGCTTTAATTTCTAACTTATAATCTAATTCCAATTTCTAATGAGGGTTTACTGCTCTTTACTGGTATGATTTATACTGAGTTTTACTAATACCAATATGATGTGGTTGATCTTTTCATACGATCCTAATCAGGATAGATCCTGATTCTGCTCCTGGCATTTCGGTGTTTTTTACTCTTTTTTTTTGGTGAAAAAACAATAGGGTGAATCGATATTCAGAGTGGCATTTCCCACTAGTTATATACCATGCCATACTTTCTTGTACTGCTTCATTTGCATTGCATATATTTCTGTTTCTTACGCTCCTTTGTTTGACAATGTTAGCTAGTTAATTTTCATTGTATATTCCTGCAGCATCATCCCTTAATTTCCTTTTATGACACTACTCAGTAGTTAATCCTCAGGCACCAACGATTTTGATAATTCTTCCTTTAACTGCCTTGCTTATATTTCCATTTCTCAATGCTCCTTTATTTAACAATGTTAGCTAGTTAGGCCACATTTTGGGTTTTAAGGATAATTTTCATGCATCTTCCTTCATTTTGAAGTTTCATCCCATTATGTCTTTTTATGGCACTAGTTAATCATGAACTATGTTTATTTCCTCTCCTGCTGTTATTGCCTTGCATGCATTTCCATTTCTTATTGCTCATTTGTTTGACATTCTTAGCTAGTTAGGCCACTAGTTGTATTTAATGACAAATTTTATTGTAACTTCCTGCACTATCATCTCTTAAAATCCTTTTATGACAGTAGTTAATAGCCAGACGTTAACCATGCTGATAATTACTCTCTTGCTTTAATGCCTTTGCTTATGTTCCATTTCTTTCTCTCTTATAATAATGTTAGTTAGTCATGCCACGTATTGTTTTTAAGGAAAATTTTCATTGCATCTTCCTGCAACCTGATTTTTGATCCCTTAATATACTTTGATCAAAGTAGCTAATCGTCAACTATGTTTAATTCCTCTCCTGATTTAATTGGCTTACATATATTTCCATTTCTCAATGCTCCTTTGTTTAACAATGTTATCTAGTTAGACCACGATTTGTTTTTAAGGAACAGTACTTCAGTCCATCTTCCTGCAATATATAATTTCCTTTCTCGATATCCTTTTCTGGCGGCAACTGAGTTTCAATTATCTATGCTGATAATTCCCCTCTTGCTTGCATTGCCATACATCTCTTTCCATTTCTTGATGCCTATATGTTTAACAATGTTAGCTAGTTAGACCATGGTAAGTTATTAAGGATCATTTCCATTGCATCTTCTATAACATAAAGTTTTGTCCCCTTAATATCCTGTTTTGGCAAAAATTAAATGTAGAAAAGTCTTTGTTTAATTGCTTGCATTTATTTCTTTGTTAAACAATGTTTGATAGTTAGGTGATTATTTGTTTTCTTAGGATCATTTTCCTTGCATCTTCCTCCTACATAAAGTGTAACCTCTCAACATCCTCTGTTTTGGCAGTAGCAAATAGTTAACTATGTTTAATTTCCTTCCTATATTAACCGCCTTGCATATCTTTCCACTTCTCAAGGCGTTTGAAACGTCCTTTAAGGCTTCGTTTGTGTAACAGTGTGTTAGTCATTAGTCAGGCCATGATTTTGTTTTCAAGGATCAACTTTGTTGTAAGCTATCCTTTCATAACAGTAGCTAATGGTCAAGTATGTTGACAGTTGATAATGCATTTCCCATCTCTTAATTCTTCATTGTTTAATAATGTAAGCTAGTTGGGATAGGTCCACAATTTGTATTTAAGGAACCTTTTCTTTTTGCATCTTCTTACAACCTAAACTTTCATCTTTTAATCTGCTTGATCTTTCTAGGTTGAGGTCGCAGCTTAGAGAAATGACAATTGATATGCCTTCCAAGC

mRNA sequence

GCTCTTTCAAAAGCGCTAAACAAATAAACAAATATAATTTCTCTATTTCTTTCTCTCTCTTCCTATTTTGTTTTCCCTCCACCCCTTTCCCGCCTCTCCTCTCCCTATCTCTCTCCATAAAATCCCCATTCTCCCTTCTCCATTCCCTCTCATCCTCAATTCTCATCTTCATCTCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATCTCTGCCACATCATGAATCGGAGATCCAGAAGATCGGGAAACTCTCAATCCGAGACGTTTCACAAGTATCTAAAGCCTGGTGCGCTAGCACAAATTCGGAATTCTCGAATGATCGCTCGATTCAATCGGGTTAATTTGGTCTCTCAGATCTACTCCGCTCCTTCCAGTCTTCCGATCGACTCCGCTTTACTTCAGGTCAACATTGTTGATGCTTCTCCTTCCTTTGCTGGGAGGGCGTATGGTCCTCTCTCTTTGCAGAGGAAGAAACTTTTGGCTTCCAAGTCTTTGTGGTTCCTCGCTTCTAGCCCTACTAATCTCACGCCTGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGGTGAACTGTACAAGTCTTCTTCTATGGAATACTTTCAACTTGTGAATCTAGTCTTTTTTTATGAAATTAAATATAACTGTAATACATGATACCTTTTGTAGGTAGTGTTGACGATGTGTTGTGAATTTTTTTTTCTTGGTTTTGATCGGATTTAAATAATAAGATCTATCATATTCTCGATCTATTGTGTTTACGACACCGAAGTCAGTTTTATTCTTCAGTTTTGTTTATCTTATCTACGCCATTCTATTAAACTTTTCTAAACTAGGGCTCATTTTGGACCTTAATGCTTGGGGCTTATGTTGAACTTCTGGTCAACTTTGGTCCTCGACTTATAAAGTAAGGGTTTAGAAGCATTTGCAAACTTCTTCCAGCAATTTCACCAATAATGCGGGTTGAGGTCGCAGCTTAGAGAAATGACAATTGATATGCCTTCCAAGC

Coding sequence (CDS)

ATGAATCGGAGATCCAGAAGATCGGGAAACTCTCAATCCGAGACGTTTCACAAGTATCTAAAGCCTGGTGCGCTAGCACAAATTCGGAATTCTCGAATGATCGCTCGATTCAATCGGGTTAATTTGGTCTCTCAGATCTACTCCGCTCCTTCCAGTCTTCCGATCGACTCCGCTTTACTTCAGGTCAACATTGTTGATGCTTCTCCTTCCTTTGCTGGGAGGGCGTATGGTCCTCTCTCTTTGCAGAGGAAGAAACTTTTGGCTTCCAAGTCTTTGTGGTTCCTCGCTTCTAGCCCTACTAATCTCACGCCTGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGGTGA

Protein sequence

MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG*
Homology
[Close]
BLAST of CSPI07G03700 vs. ExPASy TrEMBL
Match: A0A0A0K3K2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043610 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALL 60
           MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALL
Sbjct: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALL 60

Query: 61  QVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 118
           QVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG
Sbjct: 61  QVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 117

[Close]
BLAST of CSPI07G03700 vs. ExPASy TrEMBL
Match: A0A5D3C9X6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004250 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.0e-53
Identity = 113/118 (95.76%), Postives = 113/118 (95.76%), Query Frame = 0 

Query: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS-APSSLPIDSAL 60
           MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS   SSLPIDS L
Sbjct: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGL 60

Query: 61  LQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 118
           LQVNIVDASPSFAGR YGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG
Sbjct: 61  LQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 118

[Close]
BLAST of CSPI07G03700 vs. ExPASy TrEMBL
Match: A0A1S3C0X0 (uncharacterized protein LOC103495597 OS=Cucumis melo OX=3656 GN=LOC103495597 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.0e-53
Identity = 113/118 (95.76%), Postives = 113/118 (95.76%), Query Frame = 0 

Query: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS-APSSLPIDSAL 60
           MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS   SSLPIDS L
Sbjct: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGL 60

Query: 61  LQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 118
           LQVNIVDASPSFAGR YGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG
Sbjct: 61  LQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 118

[Close]
BLAST of CSPI07G03700 vs. ExPASy TrEMBL
Match: A0A6J1EXJ2 (uncharacterized protein LOC111437092 OS=Cucurbita moschata OX=3662 GN=LOC111437092 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.5e-47
Identity = 105/126 (83.33%), Postives = 109/126 (86.51%), Query Frame = 0 

Query: 1   MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APS 60
           MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS      +P 
Sbjct: 1   MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPP 60

Query: 61  SLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPV 118
           + PIDSALLQVNIVDASP FAGR YGPL LQRKKLLA+KSLWFL+SSPTNLTPDSPPDPV
Sbjct: 61  TAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSSPTNLTPDSPPDPV 120

[Close]
BLAST of CSPI07G03700 vs. ExPASy TrEMBL
Match: A0A6J1GLZ8 (uncharacterized protein LOC111455201 OS=Cucurbita moschata OX=3662 GN=LOC111455201 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.5e-47
Identity = 105/124 (84.68%), Postives = 108/124 (87.10%), Query Frame = 0 

Query: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APSSLP 60
           MNRRSRRSGNS SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS      +PS+ P
Sbjct: 1   MNRRSRRSGNSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPSTAP 60

Query: 61  IDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASK-SLWFLASSPTNLTPDSPPDPVIE 118
           I S LLQVNI DASP FAGR YGPL LQRKKLLA+K SLWFLASSPTNLTPDSPPDPVI 
Sbjct: 61  IGSGLLQVNIADASPCFAGRVYGPLCLQRKKLLAAKSSLWFLASSPTNLTPDSPPDPVIG 120

[Close]
BLAST of CSPI07G03700 vs. NCBI nr
Match: XP_004144589.1 (uncharacterized protein LOC101204134 [Cucumis sativus] >KGN43519.1 hypothetical protein Csa_020443 [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 3.2e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALL 60
           MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALL
Sbjct: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSAPSSLPIDSALL 60

Query: 61  QVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 118
           QVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG
Sbjct: 61  QVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 117

[Close]
BLAST of CSPI07G03700 vs. NCBI nr
Match: XP_008455441.1 (PREDICTED: uncharacterized protein LOC103495597 [Cucumis melo] >KAA0040243.1 uncharacterized protein E6C27_scaffold888G00280 [Cucumis melo var. makuwa] >TYK07106.1 uncharacterized protein E5676_scaffold13G004250 [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 113/118 (95.76%), Postives = 113/118 (95.76%), Query Frame = 0 

Query: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS-APSSLPIDSAL 60
           MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS   SSLPIDS L
Sbjct: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGL 60

Query: 61  LQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 118
           LQVNIVDASPSFAGR YGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG
Sbjct: 61  LQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 118

[Close]
BLAST of CSPI07G03700 vs. NCBI nr
Match: XP_038888488.1 (uncharacterized protein LOC120078321 [Benincasa hispida])

HSP 1 Score: 212.2 bits (539), Expect = 2.4e-51
Identity = 110/122 (90.16%), Postives = 112/122 (91.80%), Query Frame = 0 

Query: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSA-----PSSLPI 60
           MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS      PS++PI
Sbjct: 1   MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSYPSTIPI 60

Query: 61  DSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVL 118
           DS LLQVNIVDASPSFAGR YGPL LQRKKLLASKSLWFL SSPTNLTPDSPPDPVIEVL
Sbjct: 61  DSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWFLTSSPTNLTPDSPPDPVIEVL 120

[Close]
BLAST of CSPI07G03700 vs. NCBI nr
Match: XP_023530330.1 (uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.1 bits (497), Expect = 1.8e-46
Identity = 105/126 (83.33%), Postives = 109/126 (86.51%), Query Frame = 0 

Query: 1   MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APS 60
           MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS      +P 
Sbjct: 1   MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPP 60

Query: 61  SLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPV 118
           + PIDSALLQVNIVDASP FAGR YGPL LQRKKLLA+KSLWFL+SSPTNLTPDSPPDPV
Sbjct: 61  TAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSSPTNLTPDSPPDPV 120

[Close]
BLAST of CSPI07G03700 vs. NCBI nr
Match: XP_022930695.1 (uncharacterized protein LOC111437092 [Cucurbita moschata])

HSP 1 Score: 196.1 bits (497), Expect = 1.8e-46
Identity = 105/126 (83.33%), Postives = 109/126 (86.51%), Query Frame = 0 

Query: 1   MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS------APS 60
           MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS      +P 
Sbjct: 1   MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPP 60

Query: 61  SLPIDSALLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPV 118
           + PIDSALLQVNIVDASP FAGR YGPL LQRKKLLA+KSLWFL+SSPTNLTPDSPPDPV
Sbjct: 61  TAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSSPTNLTPDSPPDPV 120

[Close]
BLAST of CSPI07G03700 vs. TAIR 10
Match: AT5G54970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 8.2e-10
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 0 

Query: 7  RSGNSQSETFHKYLKPGALAQIRNSR--------MIARFNRVNLVSQIYSAPSSLPIDSA 66
          +S   +S+ FH+YLKPGALAQIRNSR        +++R +   LV  I  + +S+   +A
Sbjct: 6  KSPARRSDGFHRYLKPGALAQIRNSRINARSTTSLVSRSSLSQLVDPISPSENSVDEAAA 65

Query: 67 LLQVNIVDASPSFAGRAYGPLSLQRKKLLASKSL 93
            +   +D  P    + YGP S QRKKL A++S+
Sbjct: 66 ASRNLTIDQVPHLLRKIYGPYSYQRKKLAAARSV 99

[Close]
BLAST of CSPI07G03700 vs. TAIR 10
Match: AT4G26960.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54970.1); Has 22 Blast hits to 22 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 6.5e-07
Identity = 40/117 (34.19%), Postives = 60/117 (51.28%), Query Frame = 0 

Query: 7   RSGNSQSETFHKYLKPGALAQIRNSRM---IARFNRVNLVSQIYSAPSS---LPIDSALL 66
           RS   +++ FH+Y+KPGALAQIRN+R+    + F     +S     PSS    PI +A  
Sbjct: 35  RSPVRRNDGFHRYMKPGALAQIRNARINNARSNFPLTRSLSDPVDPPSSSSESPI-AATP 94

Query: 67  QVNIVDASPSFAGRAYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPDPVIEVLGG 118
           Q   +D  P    + YGP  + RKKL  ++      S+   L P   P+ ++E + G
Sbjct: 95  QTITMDQMPHLLSKIYGPYRIGRKKLGPAR------SAMVKLNPS--PNSILESING 142

The following BLAST results are available for this feature:
BLAST of CSPI07G03700 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G03700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3K21.6e-56100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043610 PE=4 SV=1[more]
A0A5D3C9X68.0e-5395.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C0X08.0e-5395.76uncharacterized protein LOC103495597 OS=Cucumis melo OX=3656 GN=LOC103495597 PE=... [more]
A0A6J1EXJ28.5e-4783.33uncharacterized protein LOC111437092 OS=Cucurbita moschata OX=3662 GN=LOC1114370... [more]
A0A6J1GLZ88.5e-4784.68uncharacterized protein LOC111455201 OS=Cucurbita moschata OX=3662 GN=LOC1114552... [more]
BLAST of CSPI07G03700 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144589.13.2e-56100.00uncharacterized protein LOC101204134 [Cucumis sativus] >KGN43519.1 hypothetical ... [more]
XP_008455441.11.6e-5295.76PREDICTED: uncharacterized protein LOC103495597 [Cucumis melo] >KAA0040243.1 unc... [more]
XP_038888488.12.4e-5190.16uncharacterized protein LOC120078321 [Benincasa hispida][more]
XP_023530330.11.8e-4683.33uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo][more]
XP_022930695.11.8e-4683.33uncharacterized protein LOC111437092 [Cucurbita moschata][more]
BLAST of CSPI07G03700 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G54970.18.2e-1039.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G26960.16.5e-0734.19unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35495:SF10SUBFAMILY NOT NAMEDcoord: 1..116
NoneNo IPR availablePANTHERPTHR35495OS06G0679600 PROTEINcoord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G03700.1CSPI07G03700.1mRNA