CSPI07G03180 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G03180
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 2546990 .. 2548114 (-)
RNA-Seq ExpressionCSPI07G03180
SyntenyCSPI07G03180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTGTGGTGAGGGTTGAGAACACATATACGTATCAATAGGAGCCATGGTTCCTAAGGGGTTTACGATTTGTTTATTGATGATGATAGGGGCGTGGAATAAGTCCTTTGTCTTCGAAAATTTTCTCCCAAGTGATGCAATGACTATCCTGAATATCCTTGTTAGGGGTTGTCGTGGTGATGATGAAAACCTTTCTGTTGAGGGAGGTGTGTTCCGTGACGGGGTTGGCTCCCCTTTAGATGGAAACCTTTATGGAAAGCTATATGGAAACTTGAGGTGCCCCTAAGGGTGAACGCTGTCTCCGACTCCCTACCTTTGCCATAATTTGTAAAAAAATGGAATCTCTATTAACCCGCTTTGTTTTCTTTGTAGGAAATGTTTTATGGGCTGCGATGCAAGTTTTCTAGAAGCATTTGATTATTATTCTTCCCTTCCTTATTTGGGCTTTTTGGCGATTTCAAGAATTGTTGGAGTCTGTCGAACTGCTGAGATAGGGTGGTTTCTACGACCGAGGTGCGTAACAGGGTTTGCGGCTATCCTACTGTGGGATGTGTGGAATTATGGAAATGTGGTGAAGCGTTGCGGGTTCGAGCCTGATCGTGATGTTCTGTTGAGAAGAATCTTCTTTACACTTGAAGGGAGATGGGGCTCCATTTTCGCTTAGGAGGGGGGAACCCGGTGCATCATGCTTCTTAGATTCCGCCTAACGTTGGGGTGTGGATGCTCAATATCGACGCCTCGTGGTTGGAGGATGTTGGGGCGGGTGGGGTTGTTCGTGACCTCTCAAGGTCTCTCTCATCTCTACGGGTTGCACGCCTGTTCTCTCAAAGTGGCCAATAACATTTTTGGAAGCCTTTGGCCTTATCAAACGGCTCCAGTCTCTGTTTTCTCAATTTCCTAGTGTCATTCTATTTCTCATTGTGATTGTTTGATTGTTTTGATCTAACTTGTGTCCTTCTACTTAGTGTTGTGAACCTCTATGAGATGAATGATTTTGTGGCTGAGATTAAAGGTCTGTTGTGTTGTGATTACTCACTCAGGTAATGCGAATGATATGGTTCGTTGTCTTGCAGGTGGTTCGTGTGTAATTTTCTTTAAGTATAAAGTATTTTATCTCTTCAATTTC

mRNA sequence

CTTTGTGGTGAGGGTTGAGAACACATATACGTATCAATAGGAGCCATGGTTCCTAAGGGGTTTACGATTTGTTTATTGATGATGATAGGGGCGTGGAATAAGTCCTTTGTCTTCGAAAATTTTCTCCCAAGTGATGCAATGACTATCCTGAATATCCTTGTTAGGGGTTGTCGTGGTGATGATGAAAACCTTTCTGTTGAGGGAGGTGTGTTCCGTGACGGGGTTGGCTCCCCTTTAGATGGAAACCTTTATGGAAAGCTATATGGAAACTTGAGGAAATGTTTTATGGGCTGCGATGCAAGTTTTCTAGAAGCATTTGATTATTATTCTTCCCTTCCTTATTTGGGCTTTTTGGCGATTTCAAGAATTGTTGGAGTCTGTCGAACTGCTGAGATAGGGTGGTTTCTACGACCGAGGTGCGTAACAGGGTTTGCGGCTATCCTACTGTGGGATGTGTGGAATTATGGAAATGTGGTGAAGCGTTGCGGGTTCGAGCCTGATCGTGATGTTCTGTTGAGAAGAATCTTCTTTACACTTGAAGGGAGATGGGGCTCCATTTTCGCTTAGGAGGGGGGAACCCGGTGCATCATGCTTCTTAGATTCCGCCTAACGTTGGGGTGTGGATGCTCAATATCGACGCCTCGTGGTTGGAGGATGTTGGGGCGGGTGGGGTTGTTCGTGACCTCTCAAGGTCTCTCTCATCTCTACGGGTTGCACGCCTGTTCTCTCAAAGTGGCCAATAACATTTTTGGAAGCCTTTGGCCTTATCAAACGGCTCCAGTCTCTGTTTTCTCAATTTCCTAGTGTCATTCTATTTCTCATTGTGATTGTTTGATTGTTTTGATCTAACTTGTGTCCTTCTACTTAGTGTTGTGAACCTCTATGAGATGAATGATTTTGTGGCTGAGATTAAAGGTCTGTTGTGTTGTGATTACTCACTCAGGTAATGCGAATGATATGGTTCGTTGTCTTGCAGGTGGTTCGTGTGTAATTTTCTTTAAGTATAAAGTATTTTATCTCTTCAATTTC

Coding sequence (CDS)

ATGGTTCCTAAGGGGTTTACGATTTGTTTATTGATGATGATAGGGGCGTGGAATAAGTCCTTTGTCTTCGAAAATTTTCTCCCAAGTGATGCAATGACTATCCTGAATATCCTTGTTAGGGGTTGTCGTGGTGATGATGAAAACCTTTCTGTTGAGGGAGGTGTGTTCCGTGACGGGGTTGGCTCCCCTTTAGATGGAAACCTTTATGGAAAGCTATATGGAAACTTGAGGAAATGTTTTATGGGCTGCGATGCAAGTTTTCTAGAAGCATTTGATTATTATTCTTCCCTTCCTTATTTGGGCTTTTTGGCGATTTCAAGAATTGTTGGAGTCTGTCGAACTGCTGAGATAGGGTGGTTTCTACGACCGAGGTGCGTAACAGGGTTTGCGGCTATCCTACTGTGGGATGTGTGGAATTATGGAAATGTGGTGAAGCGTTGCGGGTTCGAGCCTGATCGTGATGTTCTGTTGAGAAGAATCTTCTTTACACTTGAAGGGAGATGGGGCTCCATTTTCGCTTAG

Protein sequence

MVPKGFTICLLMMIGAWNKSFVFENFLPSDAMTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFLEAFDYYSSLPYLGFLAISRIVGVCRTAEIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEPDRDVLLRRIFFTLEGRWGSIFA*
Homology
[Close]
BLAST of CSPI07G03180 vs. ExPASy TrEMBL
Match: A0A0A0K5B7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038180 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.5e-79
Identity = 139/142 (97.89%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 32  MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFLEAF 91
           MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASF+EAF
Sbjct: 1   MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF 60

Query: 92  DYYSSLPYLGFLAISRIVGVCRTAEIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 151
           DYYSSLPYLGFLAISRIVGVCRTA+IGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP
Sbjct: 61  DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 120

Query: 152 DRDVLLRRIFFTLEGRWGSIFA 174
           DRD LLRRIFFTLEGRWGSIFA
Sbjct: 121 DRDALLRRIFFTLEGRWGSIFA 142

[Close]
BLAST of CSPI07G03180 vs. NCBI nr
Match: XP_011658683.1 (uncharacterized protein LOC105436073 [Cucumis sativus] >KGN43467.1 hypothetical protein Csa_020272 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 5.2e-79
Identity = 139/142 (97.89%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 32  MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFLEAF 91
           MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASF+EAF
Sbjct: 1   MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF 60

Query: 92  DYYSSLPYLGFLAISRIVGVCRTAEIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 151
           DYYSSLPYLGFLAISRIVGVCRTA+IGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP
Sbjct: 61  DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 120

Query: 152 DRDVLLRRIFFTLEGRWGSIFA 174
           DRD LLRRIFFTLEGRWGSIFA
Sbjct: 121 DRDALLRRIFFTLEGRWGSIFA 142

The following BLAST results are available for this feature:
BLAST of CSPI07G03180 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G03180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5B72.5e-7997.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038180 PE=4 SV=1[more]
BLAST of CSPI07G03180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011658683.15.2e-7997.89uncharacterized protein LOC105436073 [Cucumis sativus] >KGN43467.1 hypothetical ... [more]
BLAST of CSPI07G03180 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G03180.1CSPI07G03180.1mRNA