CSPI07G03010 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G03010
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 2450519 .. 2450686 (-)
RNA-Seq ExpressionCSPI07G03010
SyntenyCSPI07G03010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAA

mRNA sequence

ATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAA

Coding sequence (CDS)

ATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAA

Protein sequence

MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV*
Homology
[Close]
BLAST of CSPI07G03010 vs. ExPASy TrEMBL
Match: A0A0A0K399 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037530 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 56
          MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV
Sbjct: 5  MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 59

[Close]
BLAST of CSPI07G03010 vs. ExPASy TrEMBL
Match: A0A5D3BTU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00190 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-08
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 1  MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMI 44
          MSSTTIWEEK LHLP+ATTIAT VA SVP VIASSAA NLLMI
Sbjct: 31 MSSTTIWEEKTLHLPDATTIATNVAVSVPTVIASSAAPNLLMI 73

[Close]
BLAST of CSPI07G03010 vs. NCBI nr
Match: KAA0059148.1 (hypothetical protein E6C27_scaffold430G00660 [Cucumis melo var. makuwa] >TYK02540.1 hypothetical protein E5676_scaffold201G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 3.4e-08
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 1  MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMI 44
          MSSTTIWEEK LHLP+ATTIAT VA SVP VIASSAA NLLMI
Sbjct: 31 MSSTTIWEEKTLHLPDATTIATNVAVSVPTVIASSAAPNLLMI 73

The following BLAST results are available for this feature:
BLAST of CSPI07G03010 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G03010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3991.9e-20100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037530 PE=4 SV=1[more]
A0A5D3BTU21.7e-0886.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CSPI07G03010 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0059148.13.4e-0886.05hypothetical protein E6C27_scaffold430G00660 [Cucumis melo var. makuwa] >TYK0254... [more]
BLAST of CSPI07G03010 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G03010.1CSPI07G03010.1mRNA