CSPI07G02380 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G02380
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr7: 2050116 .. 2054581 (+)
RNA-Seq Expression	CSPI07G02380
Synteny	CSPI07G02380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAAAACCCTACTCCCATCCCCTCTCCTCCCAACCCCATTTGAACTTTCATCAAATACCCTCTCGTACCAATATTTCTTCATAATTTCTTGGTTTAAATTTCTCATGGGGGCGTTTCAACTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGTCTTCAACTATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAACCCATTGCGAACGCCGGATTTCTCACTCTACCCTGCGCAATCTCGTCGTTTTGCCTCCAATTCCATGGATGACGATCATGCCTTCTCGGATTCCGAGCCGATAAACACCCCGCCGCAACGTCGTTTTCCTCCAGATCATCGCGAAGCTCGTCGTGTTCCCAGAGGGGGAGTAACTGCTTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACAAATGAAGGGTCGACTTCGCCACAAAGGAGTGAGTCTTTATCTCAGAAAGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAAAGAGAAAACTGAGGAGAACTCTTCTTCTGCTCCGGTGTCTGAATCAATGCTGGAGAAGCAGCAGTCGGAACCGCAGGGTCCTCCAGAAGCTGATGAGATATTCAGGAAAATGAAGGAGACTGGTTTAATTCCCAATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAGTTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGCATAACGGTATTCCTCCAAATGCCTTCAGTTTTGGTGTCTTGATTCAGGGATTGTACAAATGCAAAAAGTTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTAATTGATGCGTTATGCAATGAGAAGGGTGTGGATGAAGCTCATAGTGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCCCATTTTCACCAGATATCTGGAAAGTGTTCTTTGGTAATAGAAAACCCCCATTTTTCTGAGATTGCTGTCGTAGTGTTGTAAGTCTTCTCTCTTTTCCCTTTTATGTAATTTCTTAGATAATTCAAGTTATGTTCACTATAGATTATATGGAGTAATTTGAGTAGTTGACCGATATGTTTGCAACCAAAATTGCCTTCAATCTTTTGATAGCTTCTATAAGTTTTCACGAATGGGTACAAATATTATAAGATACGAAACAAGGAAAAGGAGAATAACCCGTTTGTTACCTTGGTATTTACAATCTTTACAATTTATCATATACTATTTAGTTTCATCAATCTCACTTTTTTTTTTAATATTTTCATTAGAATTCTGGGATGGTTGTGATTTATAAAAGAGGAAAAACAACCTTTCATTAGAAAAAAAAAATGAAGAAATACACGGAAATCCAAAAAAAACCATGCACACAAAAAGGAGTGCCACTAGAGAAACGGTGTCTAGTTGTAAAATGATCCCTAACGAATAATTACACACAACCTCCTTATGCTTGTGTATTTTTTTGAATGAGAAACACAACTTTCATTGAGAAAGAATGAGAGAATAGAATGCATGGGTACAGAAAAACCAAACCCACAAAAAGAAGGAATTTCATTATAAGAAGGGACTCCAACTATACAAAATTATGTTCATATAATAATTACAAAAGATCTTTGATATTGAAGGCAAGCGAAGAAGAGAACATAAGCCTTCGCTTCCCATCTGAACACCCCACTATTTCTCTTGTCCCCAAGCACCACAGAATAGCACAAACGCTGGCACATCAGAGAAAGCGGCCTGCCTTTCTTACCAAACGGAGGAACTCCTTGATCATATCTTTATCAACTCTGGGACAAAAACTGCTCAAGCCAAAAGTCTGGAAGAAGAAAGAGTCCCAAACACTCGTTCTCATTGTTATCTTCATTCAGGAATATCGTTACCCAAGCTTATTTTGATTTCTTCCCATCAAGCTTACTGCACTAGTTTACAAGTTTTAGAATCACTCAACAAAAAGATAGCCCAACCTATAACCTGTCATACGATAAGTGCACACTTTAAATTAAGTTAAAAGCTTCCAAAATCTTACTAAGCATAAACGTACAAGAACATACAAGAAGTCACATAAGCATAAACATACAAGAACTTAGGTGTAAATCTTACTTAGCGTTGCTGCTTCCCCCTCCCTCTCTTTCTGCTCCTTCCTCATCTTCTTCTTCTTATCAACACCAGCTGGAAGTGCGAAAGTTTACATGGATAGATACCATTTTGGGCTTAACCAGTTGAAAAGGTTCAATTTTCCTTTTAAAAATGATACACAAAATTCAAATTTCTGGTCTGCATCATCATATTCATCACTTTTATCACAAACTAAGCATTATGTGTGCATTTCTCACTACATCATTAATTACATTTCAATCCAGACAATGTTTTATATTGAACTCATGGGACAACCCGCCTTAAGGAAACTTGTAGGAAATTAATTCATGGACAGATTGTCACCATGGTTTGAACTCATGACCTCTTAGTTAGATATTGAGAACTCTTTTTTATCACTAGACCAATTCATTCCTTGATGTTTTTCCTCTTGAAGAGGCAAGGCTTAAGCGTCAAATAATGAATTAAAAATGTTTTATAAAACCTAAAGTGGCTAAACATGATAGGTGTATGTATAAAAGTCTGAATACACAAAATTCTAAACGGACATCTTTATCATCATTACTGGAACTATTATCAGTAATAGGATTGATTTATGTTATATATGTTTGCTTTCAACATTCTTCAGTTCGTAATACTAGAAATAATTCTAGTTGCAATTGTCACAACTCAAACCTTAATATTTTTGAAGAATTAGGTAAATCACTATTATTTTTTCTAATCACTAGGTGAGGACCGTGAGGTATAGAGATTTTAAGCTTTGATGTGTTTTCACAAAAGGTGCAAGCCTCATTTGTGGGAGACGTAAGCCTCTTATGGTTCAATAAAGGCATAAGTCTCGAGGCTAAAACTTAGAGCCTTGCCTCGAGGCGGGCCTCAAGGCATAAGCCTCAATAACTTTTTAAAACATGGAATCCAAAATAATAATCGGTTGTGAAGATTTTGACTGGGATGCTCAACAAGGAATCGCAACTCAATTTTTAGGCTTCCTAAATATTTGCAGGCAAAGTTGCATCTTATGGGATAATCGTTTCACTAGTGAATGGAACTCAACTAGAGACTTGTAGGTCATTACATTTTGGAATTTGATGAGTGGAAGTTCATACTCAATATTGTGTGCAGATTTTTTGGCTATTATTAGAAAAATACTTAAATGCATCCCAAATTTGCCACATGACAGGTACCTCTTATATCTTTCTTAAAATATTTTAATTCTTTTTTGTGTGTGTAATGTGAGTGGGATGCATGGAGATAGAATGCACCTAAGCATGCTTTTATAATTTTTATTAAGATGATGTTGGGATGCCCAATTGCGCTACCTGATCCTTAGATTCTAGTTTTTTTTTACTCTTGTACAATCCTCTTGCTCTTAGAGCTCTTGTATCTCTTTTTTGTACTATTATTAATTAAGAGATCTGTTTCCTTAATATGATATTAAGATGATGTTTTCATTTAATAAGGTGGTATAATTTGCATTCTTGTTAGTTATGGCTAAGCAGCTCCCTAAGTGTTGTGCTTATCTGTTTGATTATGTAGGTGAAGAGACCAATCATATTACTGAGAAGAAACCACAAGTTGAAATCATTGTAACTCAGTAGTCAGAATTTGATTATCGCGTTGAAGAATAAAAATCTGGTTGAAGAGTGAACTGTCTACAACTGTTTAAGTGAGAGCTCTAAACCATTGGTCAAGTTTGGGGAACACAAAACTTGTGCAGTCAAGTTCATTGACCTTTCGTGAAAGATTGTGTGGACTGGATCAATGCATGGGAGACATTAGCTGCAGTTAACAACTGATGGATATTTTTTGCAAGATTGAACATCAGAAAATCTGTCCAATTCACCATTTACCTCTTAGAATTTTTTTAAAACAATCATGTAAGTTATGACTATGTCATTGCTTCCTAGTTGCTACCACTAATGGCTATATAGAGTTTCTTTTTGTCTCTCACTCTCTGTGCACTGTGCTTAACTTCCCTTATTTAATTATTTGATTGTAAAGAGTTTATATGAGTGACTAGAAAGCTTAACCTAATAGATTGATTGGTGATGTAACAGTATAAGGATGGAAGGTCTTGTATTCAAATTTTTGTAACAAACCGTTGTTTCTTCTCCAATTAACATTGATTTCTACTTGTAGGTCTTCC

mRNA sequence

GCTAAAACCCTACTCCCATCCCCTCTCCTCCCAACCCCATTTGAACTTTCATCAAATACCCTCTCGTACCAATATTTCTTCATAATTTCTTGGTTTAAATTTCTCATGGGGGCGTTTCAACTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGTCTTCAACTATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAACCCATTGCGAACGCCGGATTTCTCACTCTACCCTGCGCAATCTCGTCGTTTTGCCTCCAATTCCATGGATGACGATCATGCCTTCTCGGATTCCGAGCCGATAAACACCCCGCCGCAACGTCGTTTTCCTCCAGATCATCGCGAAGCTCGTCGTGTTCCCAGAGGGGGAGTAACTGCTTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACAAATGAAGGGTCGACTTCGCCACAAAGGAGTGAGTCTTTATCTCAGAAAGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAAAGAGAAAACTGAGGAGAACTCTTCTTCTGCTCCGGTGTCTGAATCAATGCTGGAGAAGCAGCAGTCGGAACCGCAGGGTCCTCCAGAAGCTGATGAGATATTCAGGAAAATGAAGGAGACTGGTTTAATTCCCAATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAGTTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGCATAACGGTATTCCTCCAAATGCCTTCAGTTTTGGTGTCTTGATTCAGGGATTGTACAAATGCAAAAAGTTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTAATTGATGCGTTATGCAATGAGAAGGGTGTGGATGAAGCTCATAGTGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCCCATTTTCACCAGATATCTGGAAAGTGTTCTTTGGTAATAGAAAACCCCCATTTTTCTGAGATTGCTGTCGTAGTGTTGTGAAGAGACCAATCATATTACTGAGAAGAAACCACAAGTTGAAATCATTGTAACTCAGTAGTCAGAATTTGATTATCGCGTTGAAGAATAAAAATCTGGTTGAAGAGTGAACTGTCTACAACTGTTTAAGTGAGAGCTCTAAACCATTGGTCAAGTTTGGGGAACACAAAACTTGTGCAGTCAAGTTCATTGACCTTTCGTGAAAGATTGTGTGGACTGGATCAATGCATGGGAGACATTAGCTGCAGTTAACAACTGATGGATATTTTTTGCAAGATTGAACATCAGAAAATCTGTCCAATTCACCATTTACCTCTTAGAATTTTTTTAAAACAATCATGTAAGTTATGACTATGTCATTGCTTCCTAGTTGCTACCACTAATGGCTATATAGAGTTTCTTTTTGTCTCTCACTCTCTGTGCACTGTGCTTAACTTCCCTTATTTAATTATTTGATTGTAAAGAGTTTATATGAGTGACTAGAAAGCTTAACCTAATAGATTGATTGGTGATGTAACAGTATAAGGATGGAAGGTCTTGTATTCAAATTTTTGTAACAAACCGTTGTTTCTTCTCCAATTAACATTGATTTCTACTTGTAGGTCTTCC

Coding sequence (CDS)

ATGGGGGCGTTTCAACTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGTCTTCAACTATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAACCCATTGCGAACGCCGGATTTCTCACTCTACCCTGCGCAATCTCGTCGTTTTGCCTCCAATTCCATGGATGACGATCATGCCTTCTCGGATTCCGAGCCGATAAACACCCCGCCGCAACGTCGTTTTCCTCCAGATCATCGCGAAGCTCGTCGTGTTCCCAGAGGGGGAGTAACTGCTTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACAAATGAAGGGTCGACTTCGCCACAAAGGAGTGAGTCTTTATCTCAGAAAGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAAAGAGAAAACTGAGGAGAACTCTTCTTCTGCTCCGGTGTCTGAATCAATGCTGGAGAAGCAGCAGTCGGAACCGCAGGGTCCTCCAGAAGCTGATGAGATATTCAGGAAAATGAAGGAGACTGGTTTAATTCCCAATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAGTTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGCATAACGGTATTCCTCCAAATGCCTTCAGTTTTGGTGTCTTGATTCAGGGATTGTACAAATGCAAAAAGTTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTAATTGATGCGTTATGCAATGAGAAGGGTGTGGATGAAGCTCATAGTGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCCCATTTTCACCAGATATCTGGAAAGTGTTCTTTGGTAATAGAAAACCCCCATTTTTCTGA

Protein sequence

MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNRKPPFF*

Homology

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BLAST of CSPI07G02380 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-73
Identity = 148/258 (57.36%), Postives = 180/258 (69.77%), Query Frame = 0


Query: 101 NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVS 160
           N H E  + +  N G +    S      D  FLE+FKL  +  S    K E+        
Sbjct: 61  NSHREPPARQAHNLGKSDTTLS------DDGFLEQFKLGVNQDSRETPKPEQ-------- 120

Query: 161 ESMLEKQQSEPQGPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREK 220
                    EP  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+K
Sbjct: 121 ------YPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDK 180

Query: 221 GTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDA 280
           GTIPEVVIYTAVV+ FCKA K ++A RIFRKMQ+NGI PNAFS+GVL+QGLY C  LDDA
Sbjct: 181 GTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDA 240

Query: 281 VAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNK 340
           VAFC+EMLESGH PN+ TFV L+DALC  KGV++A S ++T  QKGF ++ KA++EF++K
Sbjct: 241 VAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 297

Query: 341 RAPFSPDIWKVFFGNRKP 358
           RAPF    W+  F  +KP
Sbjct: 301 RAPFPSLAWEAIF-KKKP 297

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BLAST of CSPI07G02380 vs. ExPASy Swiss-Prot
Match: Q9M9X9 (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g06710 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 175 PEADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAV 234
           P+ D  F++  +    PN V   A+LDG CK   ++EA KL   +  +G  P  ++Y A+
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 235 VDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGH 294
           +DG CK  K DEA  +  +M  +G P   +++  LI   +K K+ D A    ++MLE+  
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 295 LPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKG 326
            PN+  +  +ID LC     DEA+ +++  ++KG
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774

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BLAST of CSPI07G02380 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-22
Identity = 55/152 (36.18%), Postives = 82/152 (53.95%), Query Frame = 0


Query: 177 ADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 236
           A E+ RKM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 237 GFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLP 296
           GFC A ++D+  ++ R M    I PN  +F VLI    K  KL +A     EM++ G  P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 297 NLTTFVGLIDALCNEKGVDEAHSVVETFKQKG 326
           N  T+  LID  C E  ++EA  +V+    KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

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BLAST of CSPI07G02380 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.5e-22
Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 0


Query: 176 EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 235
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 236 DGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHL 295
            GFC+     EA ++F +M   G+ P++ +F  LI G  K   + DA    N M+++G  
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 296 PNLTTFVGLIDALCNEKGVDEAHSVV 319
           PN+ T+  LID LC E  +D A+ ++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELL 479

[Close]

BLAST of CSPI07G02380 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.4e-22
Identity = 45/151 (29.80%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 176 EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 235
           EA E++ +M   G+ P+ +   +++DG CK+  + EA ++F L+  KG  P++V Y+ ++
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392

Query: 236 DGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHL 295
           + +CKA++ D+ +R+FR++   G+ PN  ++  L+ G  +  KL+ A     EM+  G  
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452

Query: 296 PNLTTFVGLIDALCNEKGVDEAHSVVETFKQ 324
           P++ T+  L+D LC+   +++A  + E  ++
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQK 483

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BLAST of CSPI07G02380 vs. ExPASy TrEMBL
Match: A0A0A0K6C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 7.0e-201
Identity = 357/360 (99.17%), Postives = 357/360 (99.17%), Query Frame = 0


Query: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60
           MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF
Sbjct: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60

Query: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120
           SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ
Sbjct: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120

Query: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGPPEADEI 180
           RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQ PPEADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEI 180

Query: 181 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           F KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 181 FGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240

Query: 241 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300
           FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
Sbjct: 241 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300

Query: 301 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNRKPPFF 360
           LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALRE LNKRAPFSPDIWKVFFGNRKPPFF
Sbjct: 301 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF 360

[Close]

BLAST of CSPI07G02380 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.2e-185
Identity = 333/360 (92.50%), Postives = 342/360 (95.00%), Query Frame = 0


Query: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60
           M AFQ QSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSL PA SRRF+SNSMDDD AF
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120
           S+SEP NTPPQRRFPPDHREARRVPRGGVT SYDNRNQRFNRHSEGSSSRFTNEGSTS Q
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 120

Query: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGPPEADEI 180
           RSESLSQKDFSFLEKFKLNTDNQSSG EKTEENSSSAPVSESM EKQQS+ Q PP ADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 180

Query: 181 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 181 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 240

Query: 241 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300
           FDEAIRIFRKMQ+ GI PNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
Sbjct: 241 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300

Query: 301 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNRKPPFF 360
           LID LC+EKGVDEAH+VVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGN+K PFF
Sbjct: 301 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

[Close]

BLAST of CSPI07G02380 vs. ExPASy TrEMBL
Match: A0A5D3D5J5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00030 PE=4 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.2e-185
Identity = 333/360 (92.50%), Postives = 342/360 (95.00%), Query Frame = 0


Query: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60
           M AFQ QSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSL PA SRRF+SNSMDDD AF
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120
           S+SEP NTPPQRRFPPDHREARRVPRGGVT SYDNRNQRFNRHSEGSSSRFTNEGSTS Q
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 120

Query: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGPPEADEI 180
           RSESLSQKDFSFLEKFKLNTDNQSSG EKTEENSSSAPVSESM EKQQS+ Q PP ADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 180

Query: 181 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 181 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 240

Query: 241 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300
           FDEAIRIFRKMQ+ GI PNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
Sbjct: 241 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300

Query: 301 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNRKPPFF 360
           LID LC+EKGVDEAH+VVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGN+K PFF
Sbjct: 301 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

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BLAST of CSPI07G02380 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 4.3e-150
Identity = 289/366 (78.96%), Postives = 313/366 (85.52%), Query Frame = 0


Query: 1   MGA--FQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDH 60
           MGA   QLQSRL+VSKIL STIR WE  FPLLH+PLRTPD SL P +SR F+SNSMDDD 
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--DNRNQRFNRHSEGSSSRFTNE 120
            FS SEP ++PPQRR PPD REARRVP+  G V+A Y  DNRNQRFNRH EGS SRF NE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGP 180
           G  S +RSESLSQKDFSFLEKFKLNTDN S+  EKTE  SSSA  SESM + +QS+PQ P
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEP-SSSAQFSESM-QGKQSQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN 300
           FCKAE  DEAIRIFRKMQ+NGI PNAFS+GVLIQGLYKCKKL+DAV+FC EMLESGH PN
Sbjct: 241 FCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPN 300

Query: 301 LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGN 360
           LTTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EKALREFLNKRAPFSP IW++ FG 
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGK 360

[Close]

BLAST of CSPI07G02380 vs. ExPASy TrEMBL
Match: A0A6J1GKZ0 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata OX=3662 GN=LOC111455321 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.6e-149
Identity = 286/366 (78.14%), Postives = 315/366 (86.07%), Query Frame = 0


Query: 1   MGA--FQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDH 60
           MGA   QLQSRL+VSKILSSTIR WE  FPLLH+PLRTPD SL P +SR F+SNSMDDD 
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--DNRNQRFNRHSEGSSSRFTNE 120
            FS SEP ++PPQRR PPD REARRVP+  G V+A Y  DNRNQRFNRHSEGSSSRF N+
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 GSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGP 180
           G  S  R+ESLSQKDFSFLEKFKLNTDNQS+  EK E  SSSA +SESM + +QS+PQ P
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQISESM-QGKQSQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN 300
           FCKAEK DEAIRIFRKMQ+NGI PNAFS+G+LIQGLYK K+L+DAV+FC EMLESGH PN
Sbjct: 241 FCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPN 300

Query: 301 LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGN 360
           LTTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EK LR+FLNKRAPFSP IW++ FG 
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGK 360

[Close]

BLAST of CSPI07G02380 vs. NCBI nr
Match: XP_004144563.1 (pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus] >KGN43381.1 hypothetical protein Csa_020248 [Cucumis sativus])

HSP 1 Score: 709.5 bits (1830), Expect = 1.4e-200
Identity = 357/360 (99.17%), Postives = 357/360 (99.17%), Query Frame = 0


Query: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60
           MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF
Sbjct: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60

Query: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120
           SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ
Sbjct: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120

Query: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGPPEADEI 180
           RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQ PPEADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEI 180

Query: 181 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           F KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 181 FGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240

Query: 241 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300
           FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
Sbjct: 241 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300

Query: 301 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNRKPPFF 360
           LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALRE LNKRAPFSPDIWKVFFGNRKPPFF
Sbjct: 301 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF 360

[Close]

BLAST of CSPI07G02380 vs. NCBI nr
Match: XP_008462006.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >XP_008462007.1 PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >KAA0050550.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18790.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 657.5 bits (1695), Expect = 6.5e-185
Identity = 333/360 (92.50%), Postives = 342/360 (95.00%), Query Frame = 0


Query: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60
           M AFQ QSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSL PA SRRF+SNSMDDD AF
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120
           S+SEP NTPPQRRFPPDHREARRVPRGGVT SYDNRNQRFNRHSEGSSSRFTNEGSTS Q
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 120

Query: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGPPEADEI 180
           RSESLSQKDFSFLEKFKLNTDNQSSG EKTEENSSSAPVSESM EKQQS+ Q PP ADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 180

Query: 181 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 181 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 240

Query: 241 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300
           FDEAIRIFRKMQ+ GI PNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG
Sbjct: 241 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300

Query: 301 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNRKPPFF 360
           LID LC+EKGVDEAH+VVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGN+K PFF
Sbjct: 301 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

[Close]

BLAST of CSPI07G02380 vs. NCBI nr
Match: XP_038888880.1 (pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hispida])

HSP 1 Score: 552.4 bits (1422), Expect = 3.0e-153
Identity = 300/364 (82.42%), Postives = 317/364 (87.09%), Query Frame = 0


Query: 3   AFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSD 62
           AFQ QSRL+V KILSSTIRKWE DFPLLH+ LR P+FSL PAQSR FASNS+DDD AFS 
Sbjct: 2   AFQFQSRLRVWKILSSTIRKWERDFPLLHDSLRMPNFSLSPAQSRCFASNSIDDDWAFSK 61

Query: 63  SEPINTPPQRRF-PPDHREARRVPRGG--VTASY--DNRNQRFNRHSEGSSSRFTNEGST 122
           SEP  +PPQRR  PPDHREARRVP     V+A +  DNRNQRFNR SEGSSSRF NE S 
Sbjct: 62  SEPRTSPPQRRSPPPDHREARRVPNFNKEVSAPFPDDNRNQRFNRRSEGSSSRFANEASI 121

Query: 123 SPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGPPEA 182
           S QR+ESL+QKDFSFLE+FKLNTDNQSS  EKTEE SSSA +SESM EK QS+PQ PPEA
Sbjct: 122 SRQRNESLTQKDFSFLERFKLNTDNQSSSIEKTEE-SSSARLSESMQEK-QSQPQRPPEA 181

Query: 183 DEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCK 242
           DEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCK
Sbjct: 182 DEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCK 241

Query: 243 AEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTT 302
           AEK DEAIRIFRKMQ+NGIPPNAFSFGVLIQGLYKCKKL+DAVAFC EMLESGH PNL T
Sbjct: 242 AEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLEDAVAFCIEMLESGHSPNLNT 301

Query: 303 FVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNR-K 361
           FVGLID LCNEKGVDEAHSVVET KQKGFLI+EKALRE LNKRAPFSP IW+V FG + K
Sbjct: 302 FVGLIDELCNEKGVDEAHSVVETLKQKGFLINEKALRELLNKRAPFSPHIWEVVFGKKNK 361

[Close]

BLAST of CSPI07G02380 vs. NCBI nr
Match: KAG7011839.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 542.3 bits (1396), Expect = 3.1e-150
Identity = 289/366 (78.96%), Postives = 315/366 (86.07%), Query Frame = 0


Query: 1   MGA--FQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDH 60
           MGA   QLQSRL+VSKILSSTIR WE  FPLLH+PLRTPD SL P +SR F+SNSMDDD 
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--DNRNQRFNRHSEGSSSRFTNE 120
            FS SEP ++PPQRR PPD REARRVP+  G V+A Y  DNRNQRFNRHSEGSSSRF NE
Sbjct: 61  NFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGP 180
           G  S  R+ESLSQKDFSFLEKFKLNTDNQS+  EK E  SSSA  SESM + +QS+PQ P
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQFSESM-QGKQSQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN 300
           FCKAEKFDEAIRIFRKMQ+NGI PNAFS+G+LIQGLYK K+L+DAV+FC EMLESGH PN
Sbjct: 241 FCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPN 300

Query: 301 LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGN 360
           LTTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EK LREFLNKRAPFSP IW++ FG 
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGK 360

[Close]

BLAST of CSPI07G02380 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 540.8 bits (1392), Expect = 8.9e-150
Identity = 289/366 (78.96%), Postives = 313/366 (85.52%), Query Frame = 0


Query: 1   MGA--FQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDH 60
           MGA   QLQSRL+VSKIL STIR WE  FPLLH+PLRTPD SL P +SR F+SNSMDDD 
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSDSEPINTPPQRRFPPDHREARRVPR--GGVTASY--DNRNQRFNRHSEGSSSRFTNE 120
            FS SEP ++PPQRR PPD REARRVP+  G V+A Y  DNRNQRFNRH EGS SRF NE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGP 180
           G  S +RSESLSQKDFSFLEKFKLNTDN S+  EKTE  SSSA  SESM + +QS+PQ P
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEP-SSSAQFSESM-QGKQSQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPN 300
           FCKAE  DEAIRIFRKMQ+NGI PNAFS+GVLIQGLYKCKKL+DAV+FC EMLESGH PN
Sbjct: 241 FCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPN 300

Query: 301 LTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGN 360
           LTTFVGLID LC EKGVDEAH+V+ET KQKGFLI+EKALREFLNKRAPFSP IW++ FG 
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGK 360

[Close]

BLAST of CSPI07G02380 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 278.5 bits (711), Expect = 7.7e-75
Identity = 148/258 (57.36%), Postives = 180/258 (69.77%), Query Frame = 0


Query: 101 NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVS 160
           N H E  + +  N G +    S      D  FLE+FKL  +  S    K E+        
Sbjct: 61  NSHREPPARQAHNLGKSDTTLS------DDGFLEQFKLGVNQDSRETPKPEQ-------- 120

Query: 161 ESMLEKQQSEPQGPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREK 220
                    EP  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+K
Sbjct: 121 ------YPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDK 180

Query: 221 GTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDA 280
           GTIPEVVIYTAVV+ FCKA K ++A RIFRKMQ+NGI PNAFS+GVL+QGLY C  LDDA
Sbjct: 181 GTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDA 240

Query: 281 VAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNK 340
           VAFC+EMLESGH PN+ TFV L+DALC  KGV++A S ++T  QKGF ++ KA++EF++K
Sbjct: 241 VAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 297

Query: 341 RAPFSPDIWKVFFGNRKP 358
           RAPF    W+  F  +KP
Sbjct: 301 RAPFPSLAWEAIF-KKKP 297

[Close]

BLAST of CSPI07G02380 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 278.5 bits (711), Expect = 7.7e-75
Identity = 148/258 (57.36%), Postives = 180/258 (69.77%), Query Frame = 0


Query: 101 NRHSEGSSSRFTNEGSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVS 160
           N H E  + +  N G +    S      D  FLE+FKL  +  S    K E+        
Sbjct: 61  NSHREPPARQAHNLGKSDTTLS------DDGFLEQFKLGVNQDSRETPKPEQ-------- 120

Query: 161 ESMLEKQQSEPQGPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREK 220
                    EP  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+K
Sbjct: 121 ------YPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDK 180

Query: 221 GTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDA 280
           GTIPEVVIYTAVV+ FCKA K ++A RIFRKMQ+NGI PNAFS+GVL+QGLY C  LDDA
Sbjct: 181 GTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDA 240

Query: 281 VAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFLNK 340
           VAFC+EMLESGH PN+ TFV L+DALC  KGV++A S ++T  QKGF ++ KA++EF++K
Sbjct: 241 VAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 297

Query: 341 RAPFSPDIWKVFFGNRKP 358
           RAPF    W+  F  +KP
Sbjct: 301 RAPFPSLAWEAIF-KKKP 297

[Close]

BLAST of CSPI07G02380 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 6.6e-26
Identity = 87/276 (31.52%), Postives = 134/276 (48.55%), Query Frame = 0


Query: 63  SEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQRS 122
           S  I+    R+ PP+ R  R   R     S  N N  F     G  +R  +  +      
Sbjct: 80  SAVIDAVHDRKLPPELRGRRDFVR-----SKRNSNSLFPWFCGGVFARQFSSETKRVNTK 139

Query: 123 ESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQGPPEADEIFR 182
            + S  D    E+    T+ Q +   K +E     P      +    EP+ P    EIF 
Sbjct: 140 VNFSLSDDDSDEE----TETQVTEDSKKQE-PPPPPYDPFSKKPAIEEPEDPKNLQEIFH 199

Query: 183 KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFD 242
           KM+  G    AV M D L KDG   EA++LF  I++K  +P+VV +TA+V+ +  A +  
Sbjct: 200 KMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAK 259

Query: 243 EAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKL-DDAVAFCNEMLESGHLPNLTTFVGL 302
           E +++F +M  +G+ PNA+++ VLI+GL    K   DA  +  EM+ +G  PN  T+  +
Sbjct: 260 ETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAV 319

Query: 303 IDALCNEKGVDEAHSVVETFKQKGFLIDEKALREFL 338
            +A   E   + A  +++  K KGF+ DEKA+RE L
Sbjct: 320 FEAFVREGKEESARELLQEMKGKGFVPDEKAVREAL 345

[Close]

BLAST of CSPI07G02380 vs. TAIR 10
Match: AT1G06710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 8.1e-24
Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 175 PEADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAV 234
           P+ D  F++  +    PN V   A+LDG CK   ++EA KL   +  +G  P  ++Y A+
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 235 VDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGH 294
           +DG CK  K DEA  +  +M  +G P   +++  LI   +K K+ D A    ++MLE+  
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 295 LPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKG 326
            PN+  +  +ID LC     DEA+ +++  ++KG
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774

[Close]

BLAST of CSPI07G02380 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 55/152 (36.18%), Postives = 82/152 (53.95%), Query Frame = 0


Query: 177 ADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 236
           A E+ RKM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 237 GFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLP 296
           GFC A ++D+  ++ R M    I PN  +F VLI    K  KL +A     EM++ G  P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 297 NLTTFVGLIDALCNEKGVDEAHSVVETFKQKG 326
           N  T+  LID  C E  ++EA  +V+    KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

The following BLAST results are available for this feature:

BLAST of CSPI07G02380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL5	1.1e-73	57.36	Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX...	[more]
Q9M9X9	1.1e-22	33.12	Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop...	[more]
Q9LPX2	1.5e-22	36.18	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]
Q0WVK7	2.5e-22	35.62	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q6NQ83	7.4e-22	29.80	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]

BLAST of CSPI07G02380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6C0	7.0e-201	99.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1	[more]
A0A1S3CFW0	3.2e-185	92.50	pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3D5J5	3.2e-185	92.50	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1I1Q2	4.3e-150	78.96	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima O...	[more]
A0A6J1GKZ0	1.6e-149	78.14	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata...	[more]

BLAST of CSPI07G02380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144563.1	1.4e-200	99.17	pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus] >KGN4338...	[more]
XP_008462006.1	6.5e-185	92.50	PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] ...	[more]
XP_038888880.1	3.0e-153	82.42	pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hisp...	[more]
KAG7011839.1	3.1e-150	78.96	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022969144.1	8.9e-150	78.96	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >X...	[more]

BLAST of CSPI07G02380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38150.1	7.7e-75	57.36	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G38150.2	7.7e-75	57.36	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G03560.2	6.6e-26	31.52	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G06710.1	8.1e-24	33.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12775.1	1.1e-23	36.18	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 226..260 e-value: 1.9E-10 score: 38.2 coord: 195..223 e-value: 7.7E-5 score: 20.6 coord: 262..294 e-value: 2.4E-5 score: 22.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 223..272 e-value: 2.9E-15 score: 56.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 195..220 e-value: 5.7E-5 score: 23.1 coord: 297..326 e-value: 0.42 score: 11.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 189..223 score: 8.582755
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 294..328 score: 8.648523
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 259..293 score: 10.55579
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 224..258 score: 13.109773
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 150..283 e-value: 1.1E-28 score: 102.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..176
None	No IPR available	PANTHER	PTHR45613:SF39	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 5..358
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 5..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G02380.1	CSPI07G02380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding