Homology
BLAST of CSPI07G02040 vs. ExPASy Swiss-Prot
Match:
Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)
HSP 1 Score: 62.8 bits (151), Expect = 7.3e-09
Identity = 85/343 (24.78%), Postives = 122/343 (35.57%), Query Frame = 0
Query: 46 EWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVL-----------IQ 105
+WT++ +A +KLK+A+ PVL N + + T+AS +GIG VL +
Sbjct: 857 QWTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVV 916
Query: 106 SHFVR--EGSAK--PIYEWELMAVELV--------------------------------- 165
+F + E + K P E EL+ +
Sbjct: 917 GYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPAR 976
Query: 166 -VQRWRP--KCYTSEVIYKPGLENKVADALSRMTSMHLNQLTAPALLE------------ 225
VQRW Y + Y G +N VADA+SR + + P E
Sbjct: 977 RVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSDPLC 1036
Query: 226 ---LIIIKEELEKGPWLS------------EIIEELKKN-----------EECVADFSLQ 283
LI +KE + E+ E +KN + V Q
Sbjct: 1037 SAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQ 1096
BLAST of CSPI07G02040 vs. ExPASy Swiss-Prot
Match:
P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 9.6e-09
Identity = 58/229 (25.33%), Postives = 81/229 (35.37%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVREAG---------------------------- 71
G C+ KG+ D KK I+ +P+P + A
Sbjct: 520 GHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCK 579
Query: 72 ---AYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQSH---- 131
+EWT E Q+AF LK+ ++ +L P+F+ F I T+AS G VL Q+H
Sbjct: 580 KNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQ 639
Query: 132 ---------FVREGSAKPIYEWELMAVELVVQRWRPKCYTSE------------------ 161
F + S K E EL A+ + +RP Y
Sbjct: 640 LPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVN 699
BLAST of CSPI07G02040 vs. ExPASy Swiss-Prot
Match:
Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)
HSP 1 Score: 62.4 bits (150), Expect = 9.6e-09
Identity = 86/343 (25.07%), Postives = 121/343 (35.28%), Query Frame = 0
Query: 46 EWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVL-----------IQ 105
+WT++ +A EKLK A+ PVL N + + T+AS +GIG VL +
Sbjct: 883 QWTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVV 942
Query: 106 SHFVR--EGSAK--PIYEWELMAVELV--------------------------------- 165
+F + E + K P E EL+ +
Sbjct: 943 GYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPAR 1002
Query: 166 -VQRWRP--KCYTSEVIYKPGLENKVADALSRMTSMHLNQLTAPALLE------------ 225
VQRW Y + Y G +N VADA+SR + + P E
Sbjct: 1003 RVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTESWKSYYKSDPLC 1062
Query: 226 ---LIIIKEELEKGPWLS------------EIIEELKKN-----------EECVADFSLQ 283
LI +KE + E+ E +KN + V Q
Sbjct: 1063 SAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQ 1122
BLAST of CSPI07G02040 vs. ExPASy Swiss-Prot
Match:
Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 62.0 bits (149), Expect = 1.2e-08
Identity = 63/240 (26.25%), Postives = 88/240 (36.67%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVRE-----------------------------A 71
G + G+K DPKK R I E P PT+V+E
Sbjct: 328 GYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTR 387
Query: 72 GAYEWTKETQ-------------EAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIG 131
G Y K +Q ++F LK+ + + +LA P F PF + T+AS IG
Sbjct: 388 GLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIG 447
Query: 132 VVLIQSHFVREGSAKPI----------------YEWELMAV------------------- 157
VL Q +G +PI E E++A+
Sbjct: 448 AVLSQDD---QGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKV 507
BLAST of CSPI07G02040 vs. ExPASy Swiss-Prot
Match:
P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 49.7 bits (117), Expect = 6.4e-05
Identity = 63/267 (23.60%), Postives = 99/267 (37.08%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVREAGAY-------------------------- 71
G S+ G K DP+K + I+E+P P V + ++
Sbjct: 387 GFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILK 446
Query: 72 ----------------EWTKETQEAFEKLKNAMMTLPV-LALPNFNLPFEIETNASGNGI 131
E+ + + AF++L+N + + V L P+F PF++ T+AS +GI
Sbjct: 447 GENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGI 506
Query: 132 GVVLIQ--------SHFVREGSAK-PIYEWELMAV------------------------- 190
G VL Q S +++ E EL+A+
Sbjct: 507 GAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQP 566
BLAST of CSPI07G02040 vs. ExPASy TrEMBL
Match:
A0A5A7U8A5 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001420 PE=4 SV=1)
HSP 1 Score: 295.4 bits (755), Expect = 2.5e-76
Identity = 172/351 (49.00%), Postives = 214/351 (60.97%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVREAGAYEWTKETQEAFEKLKNAMMTLPVLALP 71
G Y S KG++VDP+K R ++EWP P+N AGAY+WT+ET+ AFEKLK AMMTLPVLA+P
Sbjct: 38 GHYISVKGIEVDPEKIRAVREWPAPSN---AGAYKWTEETEAAFEKLKKAMMTLPVLAMP 97
Query: 72 NFNLPFEIETNASGNGIGVVLIQ-----SHFVR----EGSAKPIYEWELMAVELVVQRWR 131
+FNLPFEIE++ASG G+G VL+Q ++F + A+P+YE EL+AV VQRWR
Sbjct: 98 DFNLPFEIESDASGFGVGAVLVQAKRPIAYFSKVLSMRDRARPVYEPELIAVVWAVQRWR 157
Query: 132 PKC------------------------------------YTSEVIYKPGLENKVADALSR 191
P Y+ EV+YKPG+ENK DALSR
Sbjct: 158 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGMENKAVDALSR 217
Query: 192 M-TSMHLNQLTAPALLELIIIKEELEKGPWLSEI---IEE--------------LKKNEE 251
M + HLNQLTAPALL++ +I+EE+ K P L EI IEE LK E
Sbjct: 218 MGPTSHLNQLTAPALLDVEVIQEEVRKDPALREIIILIEEQGVEIPYYTCHQGILKFKER 277
Query: 252 CVAD-----------------FSLQQGFFRTYKRLKGELYWEGMKGDVKKYCEKCVVCQH 283
V F GF +TYKR+ GELYW+GMK DV+KYCE+C++CQ
Sbjct: 278 LVLSKTSTLIPTIMHTYHDSVFGGHSGFLKTYKRMAGELYWKGMKKDVQKYCEECMICQK 337
BLAST of CSPI07G02040 vs. ExPASy TrEMBL
Match:
A0A5D3CXB1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001180 PE=4 SV=1)
HSP 1 Score: 294.7 bits (753), Expect = 4.2e-76
Identity = 171/381 (44.88%), Postives = 219/381 (57.48%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVRE------------------------------ 71
G Y S+KG++VDP+K R +KEWP P NVRE
Sbjct: 882 GHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLK 941
Query: 72 AGAYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQ-----SH 131
+GAY+WT+ET+ AFEKLK AMMTLPVLA+P+FNLPFEIE++ASG G+G VL+Q ++
Sbjct: 942 SGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAY 1001
Query: 132 FVR----EGSAKPIYEWELMAVELVVQRWRPKC--------------------------- 191
F + A+P+YE ELMAV VQRWRP
Sbjct: 1002 FSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQY 1061
Query: 192 ---------YTSEVIYKPGLENKVADALSRM-TSMHLNQLTAPALLELIIIKEELEKGPW 251
Y+ EV+YKPGLENK ADALSR+ + HLNQLTAPALL++ +I++E+ K P
Sbjct: 1062 QQWIAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPA 1121
Query: 252 LSEIIEELKKNEECVADFSLQQ----------------------------------GFFR 283
L EI+ +++ + ++ Q GF R
Sbjct: 1122 LREILSMIEEQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLR 1181
BLAST of CSPI07G02040 vs. ExPASy TrEMBL
Match:
A0A5A7U2S1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00940 PE=4 SV=1)
HSP 1 Score: 294.7 bits (753), Expect = 4.2e-76
Identity = 171/381 (44.88%), Postives = 219/381 (57.48%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVRE------------------------------ 71
G Y S+KG++VDP+K R +KEWP P NVRE
Sbjct: 882 GHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLK 941
Query: 72 AGAYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQ-----SH 131
+GAY+WT+ET+ AFEKLK AMMTLPVLA+P+FNLPFEIE++ASG G+G VL+Q ++
Sbjct: 942 SGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAY 1001
Query: 132 FVR----EGSAKPIYEWELMAVELVVQRWRPKC--------------------------- 191
F + A+P+YE ELMAV VQRWRP
Sbjct: 1002 FSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQY 1061
Query: 192 ---------YTSEVIYKPGLENKVADALSRM-TSMHLNQLTAPALLELIIIKEELEKGPW 251
Y+ EV+YKPGLENK ADALSR+ + HLNQLTAPALL++ +I++E+ K P
Sbjct: 1062 QQWIVKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPA 1121
Query: 252 LSEIIEELKKNEECVADFSLQQ----------------------------------GFFR 283
L EI+ +++ + ++ Q GF R
Sbjct: 1122 LREILSMIEEQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLR 1181
BLAST of CSPI07G02040 vs. ExPASy TrEMBL
Match:
A0A5D3DI73 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00700 PE=4 SV=1)
HSP 1 Score: 294.7 bits (753), Expect = 4.2e-76
Identity = 171/381 (44.88%), Postives = 219/381 (57.48%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVRE------------------------------ 71
G Y S+KG++VDP+K R +KEWP P NVRE
Sbjct: 822 GHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLK 881
Query: 72 AGAYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQ-----SH 131
+GAY+WT+ET+ AFEKLK AMMTLPVLA+P+FNLPFEIE++ASG G+G VL+Q ++
Sbjct: 882 SGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAY 941
Query: 132 FVR----EGSAKPIYEWELMAVELVVQRWRPKC--------------------------- 191
F + A+P+YE ELMAV VQRWRP
Sbjct: 942 FSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQY 1001
Query: 192 ---------YTSEVIYKPGLENKVADALSRM-TSMHLNQLTAPALLELIIIKEELEKGPW 251
Y+ EV+YKPGLENK ADALSR+ + HLNQLTAPALL++ +I++E+ K P
Sbjct: 1002 QQWIAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPA 1061
Query: 252 LSEIIEELKKNEECVADFSLQQ----------------------------------GFFR 283
L EI+ +++ + ++ Q GF R
Sbjct: 1062 LREILSMIEEQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLR 1121
BLAST of CSPI07G02040 vs. ExPASy TrEMBL
Match:
A0A5A7U6J3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001310 PE=4 SV=1)
HSP 1 Score: 294.7 bits (753), Expect = 4.2e-76
Identity = 171/381 (44.88%), Postives = 219/381 (57.48%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVRE------------------------------ 71
G Y S+KG++VDP+K R +KEWP P NVRE
Sbjct: 822 GHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLK 881
Query: 72 AGAYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQ-----SH 131
+GAY+WT+ET+ AFEKLK AMMTLPVLA+P+FNLPFEIE++ASG G+G VL+Q ++
Sbjct: 882 SGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAY 941
Query: 132 FVR----EGSAKPIYEWELMAVELVVQRWRPKC--------------------------- 191
F + A+P+YE ELMAV VQRWRP
Sbjct: 942 FSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQY 1001
Query: 192 ---------YTSEVIYKPGLENKVADALSRM-TSMHLNQLTAPALLELIIIKEELEKGPW 251
Y+ EV+YKPGLENK ADALSR+ + HLNQLTAPALL++ +I++E+ K P
Sbjct: 1002 QQWIAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPA 1061
Query: 252 LSEIIEELKKNEECVADFSLQQ----------------------------------GFFR 283
L EI+ +++ + ++ Q GF R
Sbjct: 1062 LREILSMIEEQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLR 1121
BLAST of CSPI07G02040 vs. NCBI nr
Match:
KAA0051400.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 295.4 bits (755), Expect = 5.1e-76
Identity = 172/351 (49.00%), Postives = 214/351 (60.97%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVREAGAYEWTKETQEAFEKLKNAMMTLPVLALP 71
G Y S KG++VDP+K R ++EWP P+N AGAY+WT+ET+ AFEKLK AMMTLPVLA+P
Sbjct: 38 GHYISVKGIEVDPEKIRAVREWPAPSN---AGAYKWTEETEAAFEKLKKAMMTLPVLAMP 97
Query: 72 NFNLPFEIETNASGNGIGVVLIQ-----SHFVR----EGSAKPIYEWELMAVELVVQRWR 131
+FNLPFEIE++ASG G+G VL+Q ++F + A+P+YE EL+AV VQRWR
Sbjct: 98 DFNLPFEIESDASGFGVGAVLVQAKRPIAYFSKVLSMRDRARPVYEPELIAVVWAVQRWR 157
Query: 132 PKC------------------------------------YTSEVIYKPGLENKVADALSR 191
P Y+ EV+YKPG+ENK DALSR
Sbjct: 158 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGMENKAVDALSR 217
Query: 192 M-TSMHLNQLTAPALLELIIIKEELEKGPWLSEI---IEE--------------LKKNEE 251
M + HLNQLTAPALL++ +I+EE+ K P L EI IEE LK E
Sbjct: 218 MGPTSHLNQLTAPALLDVEVIQEEVRKDPALREIIILIEEQGVEIPYYTCHQGILKFKER 277
Query: 252 CVAD-----------------FSLQQGFFRTYKRLKGELYWEGMKGDVKKYCEKCVVCQH 283
V F GF +TYKR+ GELYW+GMK DV+KYCE+C++CQ
Sbjct: 278 LVLSKTSTLIPTIMHTYHDSVFGGHSGFLKTYKRMAGELYWKGMKKDVQKYCEECMICQK 337
BLAST of CSPI07G02040 vs. NCBI nr
Match:
TYK23090.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 294.7 bits (753), Expect = 8.7e-76
Identity = 171/381 (44.88%), Postives = 219/381 (57.48%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVRE------------------------------ 71
G Y S+KG++VDP+K R +KEWP P NVRE
Sbjct: 822 GHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLK 881
Query: 72 AGAYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQ-----SH 131
+GAY+WT+ET+ AFEKLK AMMTLPVLA+P+FNLPFEIE++ASG G+G VL+Q ++
Sbjct: 882 SGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAY 941
Query: 132 FVR----EGSAKPIYEWELMAVELVVQRWRPKC--------------------------- 191
F + A+P+YE ELMAV VQRWRP
Sbjct: 942 FSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQY 1001
Query: 192 ---------YTSEVIYKPGLENKVADALSRM-TSMHLNQLTAPALLELIIIKEELEKGPW 251
Y+ EV+YKPGLENK ADALSR+ + HLNQLTAPALL++ +I++E+ K P
Sbjct: 1002 QQWIAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPA 1061
Query: 252 LSEIIEELKKNEECVADFSLQQ----------------------------------GFFR 283
L EI+ +++ + ++ Q GF R
Sbjct: 1062 LREILSMIEEQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLR 1121
BLAST of CSPI07G02040 vs. NCBI nr
Match:
TYK15990.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 294.7 bits (753), Expect = 8.7e-76
Identity = 171/381 (44.88%), Postives = 219/381 (57.48%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVRE------------------------------ 71
G Y S+KG++VDP+K R +KEWP P NVRE
Sbjct: 882 GHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLK 941
Query: 72 AGAYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQ-----SH 131
+GAY+WT+ET+ AFEKLK AMMTLPVLA+P+FNLPFEIE++ASG G+G VL+Q ++
Sbjct: 942 SGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAY 1001
Query: 132 FVR----EGSAKPIYEWELMAVELVVQRWRPKC--------------------------- 191
F + A+P+YE ELMAV VQRWRP
Sbjct: 1002 FSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQY 1061
Query: 192 ---------YTSEVIYKPGLENKVADALSRM-TSMHLNQLTAPALLELIIIKEELEKGPW 251
Y+ EV+YKPGLENK ADALSR+ + HLNQLTAPALL++ +I++E+ K P
Sbjct: 1062 QQWIAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPA 1121
Query: 252 LSEIIEELKKNEECVADFSLQQ----------------------------------GFFR 283
L EI+ +++ + ++ Q GF R
Sbjct: 1122 LREILSMIEEQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLR 1181
BLAST of CSPI07G02040 vs. NCBI nr
Match:
KAA0049776.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 294.7 bits (753), Expect = 8.7e-76
Identity = 171/381 (44.88%), Postives = 219/381 (57.48%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVRE------------------------------ 71
G Y S+KG++VDP+K R +KEWP P NVRE
Sbjct: 822 GHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLK 881
Query: 72 AGAYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQ-----SH 131
+GAY+WT+ET+ AFEKLK AMMTLPVLA+P+FNLPFEIE++ASG G+G VL+Q ++
Sbjct: 882 SGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAY 941
Query: 132 FVR----EGSAKPIYEWELMAVELVVQRWRPKC--------------------------- 191
F + A+P+YE ELMAV VQRWRP
Sbjct: 942 FSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQY 1001
Query: 192 ---------YTSEVIYKPGLENKVADALSRM-TSMHLNQLTAPALLELIIIKEELEKGPW 251
Y+ EV+YKPGLENK ADALSR+ + HLNQLTAPALL++ +I++E+ K P
Sbjct: 1002 QQWIAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPA 1061
Query: 252 LSEIIEELKKNEECVADFSLQQ----------------------------------GFFR 283
L EI+ +++ + ++ Q GF R
Sbjct: 1062 LREILSMIEEQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLR 1121
BLAST of CSPI07G02040 vs. NCBI nr
Match:
KAA0049630.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 294.7 bits (753), Expect = 8.7e-76
Identity = 171/381 (44.88%), Postives = 219/381 (57.48%), Query Frame = 0
Query: 12 GAYCSRKGVKVDPKKTRTIKEWPIPTNVRE------------------------------ 71
G Y S+KG++VDP+K R +KEWP P NVRE
Sbjct: 882 GHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLK 941
Query: 72 AGAYEWTKETQEAFEKLKNAMMTLPVLALPNFNLPFEIETNASGNGIGVVLIQ-----SH 131
+GAY+WT+ET+ AFEKLK AMMTLPVLA+P+FNLPFEIE++ASG G+G VL+Q ++
Sbjct: 942 SGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAY 1001
Query: 132 FVR----EGSAKPIYEWELMAVELVVQRWRPKC--------------------------- 191
F + A+P+YE ELMAV VQRWRP
Sbjct: 1002 FSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQY 1061
Query: 192 ---------YTSEVIYKPGLENKVADALSRM-TSMHLNQLTAPALLELIIIKEELEKGPW 251
Y+ EV+YKPGLENK ADALSR+ + HLNQLTAPALL++ +I++E+ K P
Sbjct: 1062 QQWIVKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPA 1121
Query: 252 LSEIIEELKKNEECVADFSLQQ----------------------------------GFFR 283
L EI+ +++ + ++ Q GF R
Sbjct: 1122 LREILSMIEEQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLR 1181
BLAST of CSPI07G02040 vs. TAIR 10
Match:
ATMG00860.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 46.2 bits (108), Expect = 5.0e-05
Identity = 31/92 (33.70%), Postives = 38/92 (41.30%), Query Frame = 0
Query: 16 SRKGVKVDPKKTRTIKEWPIPTNVRE-------AGAY----------------------- 75
S +GV DP K + WP P N E G Y
Sbjct: 40 SGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSL 99
Query: 76 EWTKETQEAFEKLKNAMMTLPVLALPNFNLPF 78
+WT+ AF+ LK A+ TLPVLALP+ LPF
Sbjct: 100 KWTEMAALAFKALKGAVTTLPVLALPDLKLPF 131
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q99315 | 7.3e-09 | 24.78 | Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
P10394 | 9.6e-09 | 25.33 | Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste... | [more] |
Q7LHG5 | 9.6e-09 | 25.07 | Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Q8I7P9 | 1.2e-08 | 26.25 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... | [more] |
P10401 | 6.4e-05 | 23.60 | Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U8A5 | 2.5e-76 | 49.00 | Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A5D3CXB1 | 4.2e-76 | 44.88 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7U2S1 | 4.2e-76 | 44.88 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3DI73 | 4.2e-76 | 44.88 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7U6J3 | 4.2e-76 | 44.88 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
Match Name | E-value | Identity | Description | |
KAA0051400.1 | 5.1e-76 | 49.00 | putative retroelement pol polyprotein [Cucumis melo var. makuwa] | [more] |
TYK23090.1 | 8.7e-76 | 44.88 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK15990.1 | 8.7e-76 | 44.88 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0049776.1 | 8.7e-76 | 44.88 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0049630.1 | 8.7e-76 | 44.88 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
ATMG00860.1 | 5.0e-05 | 33.70 | DNA/RNA polymerases superfamily protein | [more] |