CSPI06G37650 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G37650
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr6: 30181899 .. 30184983 (-)
RNA-Seq Expression	CSPI06G37650
Synteny	CSPI06G37650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATGGAGTGCGACGATGATCGGAGCCCTTCTGGGCCTCGGCACTCAGATGTACTCCAATGCTCTCCGTAAACTCCCTTACATGCGCCGTACGTTCCAAACCCTAGTCTTTTCATTTCCCCATCATAACCCTTCTCTTCTGTTTCGATTTCGATTTCGATTTCTATCATCGATTCCATCTCATAATTTTGCAGATCCTTGGGAGCATTTAGTGGGAATGGGATTGGGAGCCGTCTTCGTCAATCAGCTGGTCAAATGGGACGCTAAGCTCCAGGAGGACCTTGACAAGATGCTCGATAAGGCCAAAGCCGCCAACGAGCGCCGCTACTTTGGTATTTGTTTTCTTCTCTCATCTTATTTTCTCTATGTTCCTCTTATACCATTCCAAATTTCGATTCCTGCTCTTACTCTTTTATCAACTCCATCGATTTGGGCTTCGTATTTTTATCTAATAAATTTCGTCTCCTTCTTTTTCTGTCCCCTACTTGTACACTTATTGTGTGACTTCCCGCCTTATGTCGCGTGAGGTCGTAAGGTTTGGCCAATGTTCTATAACCTTTTAAGGATCAGAGTATGATAATCGTCTGCACATGGGTTTGAATATGGTGGACCAATGGGTTGTTAATTCCGTGTTAGACCGCAATTACATAGAAAATATTAAGTTATTAGGTTATTGTAATTTTAAGAATGGAAGGAGTGGCATTTTTTAATGAACAAGAGGCGAGATCAGAAAAGAAGAGATTGGGGTGATCAAATATTTCCCCAGCCAAGGTGCATATAGGAACACCCCCCATAGCAATTAATGAGTTACAGTGATTAGTTTAGGTACACAATCCCTATGTGGAGCATTTCAATATGAGATCATATTAATCTTGTGGAGGGAATTTGATGATATTTTGGATGCTTTTCCTAATGGAGAGAAGTTATAAGACAAACAATTCTGAAAAAAAAAATGCTTACATGAATTTGTTATGCTGTTTTCAATCATCTTCCTCACTCCACCTTAAGAAACAATCTAAATGCTAAAACACGTAGCACTCCCCAATATTAATATATGATCTCTTGGTAATGTACAAGTTGGTTAACGAAGAAAGAAAATAAAAGACTATGCAATCTAAAACATACTTAACAACATGTAGTTGGAGGCAAAAGGTGAACTTCGGTTAAGGATGGGGACTACAATTCCGCTCTCTTCCATAGGGTGGCAAGATGCCATAGGAGTAGGAATAGAATTAACCCTTTGATTTCTGAGGCTGGGGAGGTGTTTCAGAAGGACGAGATGATTGAGAAGGAGATCCTTAGTCCCATGTTATACAGCCCGGAGGTCTCCACCAAACCCTTTGTTCAAGGGATTGTGGGGAACCCTCCTCGAGCTTGCTCGCGCTCTCATTTTGTCTACTTCTCTTTCTTCCTACTTATGAGAGGATGTAGTCCTCGTTGCGGCACATCTTATCAATAGAATGTCATCTTGGGTCCTCCACCTCCAAACACCTCTTGAATGTCTCAAGGAGTTCTACCCTACCACACACCAAATTGCTTATGTTCTCACCAAAGGATTACTTAGGCAGAACTTTGACTCTTGTGTTAGCAAGTTGGGTCTCATTGTGACATCTATGCTCCAACTTGAGGGGGAGGGGGAGTGTTGGAAATAAGTTAAAATAGCCGGTAAACATATATGTTTCAGAAGGACGAGATGATTGAGAAGGAGATCCTTAGTTTCCTCCCCATGTTATAGAGCCCGGAGGTCTCCACCAAACCCTTTGTTCAAGGGATCGTGGGGAACCCTCCTCGAGGTTGCTTGCTCTCTCATGAGGGAGAGTGTTGGAAATAAGAGGCTAGTTGAGTGTTTGTAGCCCCAAGGGTGTTTTGTAATTTATTGTACTGTACCCTAGGCGTACTACCTTGTTTGTTAGGGCTTATTGTAGCCTATACATATTCTTCCACCTTGTATTCTTTTGATTATTAGAAGTTAATAAGAAAGGCTTCTATTGTGGTTTTTCTCCCAATACTAGGGTTTTCTACGGATACCTTGTATTTTCTATTCTTTTTAATATATTTCATTCTAGTAAATGGGCTGATTTGCTGTTGGAAGTTGTGGTTCGGTAGTTATTTTATGCCGAATTAGCTGTTGAGCTAGTTATTTGGTTTGTTAAAAATTGTTAGCTTTTCAGTTAGTATTCTAGTATGAAATCTGGCTTTCAACTTGTATTTGACAGATCTGTATTCAATAAATCTCTTTTGTTTGATTTTTACACCAACTGAAACAGAAAGCAGATAATTTATGGGAGAAGGATCCCATATTCTCTATATTATGAAATTTCAACGAAAATGTCTTCTGGCTGCTTGAAGAAAACCTGCTTCTGCTCACTGTAGACACAACCATTTCTTCTAAATCTCTGTGAAATTAATTCTTCCCAAACTGAAAGTCACACAAAAGAGTCTCCTTTTCCTTTTCAAAAGGATGACAAAGCAAAAAAGACCGAAGGCCTTGGACAATTGTTAGGAAGAAAAACCTGTTTGTAAGAGGGGCAATGGAGGAAAATATGGCCCAGTTCTCAAGAAGTTCATTTAAAAATAGTACAGCAGGAAGGTGAAAGGGCTGTATGAATCCTTTGAGTAAGCTTAATGCTCAAGTGTTAGCATTCAGCACTTCCATTGTTGAGATCTGTTAGGAACCAAGATCCAAAAGGAAGAGTTTTACCTTTGTTTCAATGCAATTCTTAAGCACTTTGGTTCCTAACAAGATCCTAAAGGAAGAGTTTACCTTTCTTAGATGTTTACCATGCCTCATTTCTTTTTACAAGGCGGGTGTATTGGTGTGTCTTGTCTCACACAGGGATGATGGTGAAGAGTTCTTACCTTTCTTGGGTGTCATGATCCTATTTTCTAACCCTTCATTACCCATCTTCAGGGTTGCAACGTGGTTATGTATTTAATCATTTCCTGCCAAGGATTGGATAGGATTTTTTTTAGCGCTCACGTTTTATCTTTTAAATTTGGTAATTTAATGAGCATTTTCTATATATAATATACTTATGTGGTAAAATTTTATTAATTGCATTGCAGATGAGGATGACGATTGA

mRNA sequence

ATGGCATGGAGTGCGACGATGATCGGAGCCCTTCTGGGCCTCGGCACTCAGATGTACTCCAATGCTCTCCGTAAACTCCCTTACATGCGCCATCCTTGGGAGCATTTAGTGGGAATGGGATTGGGAGCCGTCTTCGTCAATCAGCTGGTCAAATGGGACGCTAAGCTCCAGGAGGACCTTGACAAGATGCTCGATAAGGCCAAAGCCGCCAACGAGCGCCGCTACTTTGATGAGGATGACGATTGA

Coding sequence (CDS)

ATGGCATGGAGTGCGACGATGATCGGAGCCCTTCTGGGCCTCGGCACTCAGATGTACTCCAATGCTCTCCGTAAACTCCCTTACATGCGCCATCCTTGGGAGCATTTAGTGGGAATGGGATTGGGAGCCGTCTTCGTCAATCAGCTGGTCAAATGGGACGCTAAGCTCCAGGAGGACCTTGACAAGATGCTCGATAAGGCCAAAGCCGCCAACGAGCGCCGCTACTTTGATGAGGATGACGATTGA

Protein sequence

MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDLDKMLDKAKAANERRYFDEDDD*

Homology

[Close]

BLAST of CSPI06G37650 vs. ExPASy TrEMBL
Match: A0A0A0KJ47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538720 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          DKMLDKAKAANERRYFDEDDD
Sbjct: 61 DKMLDKAKAANERRYFDEDDD 81

[Close]

BLAST of CSPI06G37650 vs. ExPASy TrEMBL
Match: A0A1S3AYR6 (uncharacterized protein LOC103484235 OS=Cucumis melo OX=3656 GN=LOC103484235 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-38
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          DKMLDKAKAANERRYFD+DDD
Sbjct: 61 DKMLDKAKAANERRYFDDDDD 81

[Close]

BLAST of CSPI06G37650 vs. ExPASy TrEMBL
Match: A0A6J1DWB2 (uncharacterized protein LOC111025064 OS=Momordica charantia OX=3673 GN=LOC111025064 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.6e-38
Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEH++GMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHVIGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          DKMLDKAKAANERRYFD+DDD
Sbjct: 61 DKMLDKAKAANERRYFDDDDD 81

[Close]

BLAST of CSPI06G37650 vs. ExPASy TrEMBL
Match: A0A6J1D0C2 (uncharacterized protein LOC111015853 OS=Momordica charantia OX=3673 GN=LOC111015853 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEH+VGMGLGAVFVNQLVKWDAKLQ+DL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQQDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          DKMLDKAKAANERRYFD+DDD
Sbjct: 61 DKMLDKAKAANERRYFDDDDD 81

[Close]

BLAST of CSPI06G37650 vs. ExPASy TrEMBL
Match: A0A6J1KPJ8 (uncharacterized protein LOC111497120 OS=Cucurbita maxima OX=3661 GN=LOC111497120 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-37
Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEH+VGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          DKML+KAKAANERRYFD+DDD
Sbjct: 61 DKMLEKAKAANERRYFDDDDD 81

[Close]

BLAST of CSPI06G37650 vs. NCBI nr
Match: XP_004134514.1 (uncharacterized protein LOC101220487 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 2.1e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          DKMLDKAKAANERRYFDEDDD
Sbjct: 61 DKMLDKAKAANERRYFDEDDD 81

[Close]

BLAST of CSPI06G37650 vs. NCBI nr
Match: XP_008439421.1 (PREDICTED: uncharacterized protein LOC103484235 [Cucumis melo])

HSP 1 Score: 167.5 bits (423), Expect = 4.7e-38
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          DKMLDKAKAANERRYFD+DDD
Sbjct: 61 DKMLDKAKAANERRYFDDDDD 81

[Close]

BLAST of CSPI06G37650 vs. NCBI nr
Match: XP_022158610.1 (uncharacterized protein LOC111025064 [Momordica charantia])

HSP 1 Score: 166.0 bits (419), Expect = 1.4e-37
Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEH++GMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHVIGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          DKMLDKAKAANERRYFD+DDD
Sbjct: 61 DKMLDKAKAANERRYFDDDDD 81

[Close]

BLAST of CSPI06G37650 vs. NCBI nr
Match: XP_042942322.1 (uncharacterized protein LOC122276562 isoform X2 [Carya illinoinensis] >KAG2689399.1 hypothetical protein I3760_09G137100 [Carya illinoinensis] >KAG6642426.1 hypothetical protein CIPAW_09G140100 [Carya illinoinensis] >KAG6642427.1 hypothetical protein CIPAW_09G140100 [Carya illinoinensis] >KAG6696260.1 hypothetical protein I3842_09G139500 [Carya illinoinensis] >KAG6696261.1 hypothetical protein I3842_09G139500 [Carya illinoinensis])

HSP 1 Score: 166.0 bits (419), Expect = 1.4e-37
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEH+VGMGLGAVFVNQLVKWDA+LQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAQLQEDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          DKMLDKAKAANERRYFDEDDD
Sbjct: 61 DKMLDKAKAANERRYFDEDDD 81

[Close]

BLAST of CSPI06G37650 vs. NCBI nr
Match: XP_038877485.1 (uncharacterized protein LOC120069762 [Benincasa hispida])

HSP 1 Score: 166.0 bits (419), Expect = 1.4e-37
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLG VFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGVVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          DKMLDKAKAANERRYFD+DDD
Sbjct: 61 DKMLDKAKAANERRYFDDDDD 81

[Close]

BLAST of CSPI06G37650 vs. TAIR 10
Match: AT4G20150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 145.2 bits (365), Expect = 2.3e-35
Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          M  SATM+GALLGLGTQMYSNALRKLPYMRHPWEH+VGMGLGAVF NQLVKWD KL+EDL
Sbjct: 1  MPISATMVGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFANQLVKWDVKLKEDL 60

Query: 61 DKMLDKAKAANERRYFDEDDD 82
          D ML KA+AANERRYFDED D
Sbjct: 61 DVMLAKARAANERRYFDEDRD 81

The following BLAST results are available for this feature:

BLAST of CSPI06G37650 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G37650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ47	1.0e-38	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538720 PE=4 SV=1	[more]
A0A1S3AYR6	2.3e-38	98.77	uncharacterized protein LOC103484235 OS=Cucumis melo OX=3656 GN=LOC103484235 PE=...	[more]
A0A6J1DWB2	6.6e-38	96.30	uncharacterized protein LOC111025064 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D0C2	1.1e-37	96.30	uncharacterized protein LOC111015853 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1KPJ8	1.5e-37	96.30	uncharacterized protein LOC111497120 OS=Cucurbita maxima OX=3661 GN=LOC111497120...	[more]

BLAST of CSPI06G37650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134514.1	2.1e-38	100.00	uncharacterized protein LOC101220487 [Cucumis sativus]	[more]
XP_008439421.1	4.7e-38	98.77	PREDICTED: uncharacterized protein LOC103484235 [Cucumis melo]	[more]
XP_022158610.1	1.4e-37	96.30	uncharacterized protein LOC111025064 [Momordica charantia]	[more]
XP_042942322.1	1.4e-37	97.53	uncharacterized protein LOC122276562 isoform X2 [Carya illinoinensis] >KAG268939...	[more]
XP_038877485.1	1.4e-37	97.53	uncharacterized protein LOC120069762 [Benincasa hispida]	[more]

BLAST of CSPI06G37650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20150.1	2.3e-35	86.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 53..73
None	No IPR available	PANTHER	PTHR36052	EXCITATORY AMINO ACID TRANSPORTER	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G37650.1	CSPI06G37650.1	mRNA