CSPI06G36830 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G36830
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Nuclear transcription factor Y subunit
Location	Chr6: 29697305 .. 29707524 (-)
RNA-Seq Expression	CSPI06G36830
Synteny	CSPI06G36830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACTGCCCCTCCCCCCCTTTCTCATCGTCGCTCATACACGCGGCCAGAATCCAAAAATCTAATAAATTAAGAAAAGGTTACTATGAGATGAAACACAAATATGCTCTTATTGGATTCCGAGCTTCCTCTGTCCCCTCTTAGAAATCAACCAGAAGAAGAAGAAGAAAGACGACGACGAATTAACTGCAACAAAGCACACACACACTCTCCTCACTTTGTTGCAGCTGAAGCAACTGGGATTTTGGGGGTCACAATTTAACCTACCCCTTCCGCAATTCCCAATTTCCAGGTGAATTTCCGATTTCCAAACCCTACTTTCTTCTCATCACTTCCTTGTTCATGAATTTTCAAACCCTTTTAAGTTGTTTTTTGTTATCTCTTTTTTAATTCTCAACTTTTAGGTTTCCCGGGTTTTCTTCTTTTGCCTAACCCGATTTGGGGCTTTTTGTGTTTTTTAATCTGGTCACGTGAATTGTTCTACAACTTCTCTTTTAGATGAGTTTTTAGTGGCTTCCTGTTTTAAATTGGATGTTAGTTTGTTTCCGTTTTGTCGATTGAGTTGCTTGGATTTAGTTACCAGATTTTGATAGTACGGCTGAAGTGACGGGTTTCTAGTCTAATGCTTATATCTGTATCTGGGTTTGTTGGGTAATCACCCTGAAAACAGAAGTTACTGGAGGACTGGAGATGACTCTGTAATGTCTGGTAAAATAGGGACAAATTGAATTTCACATGCTATGCACGTCAAACTCATCTGACTGGTTTGCACTTACCTTGTCGACTTCTGAAAGGACTGAAGTTTAATAAGTTTTGGTTGTAGACTAATTGCATGATATTTTCCATTCATTAGGTTGATATTGCATTGGATTGATTACACATGCTGATATAATTTGCATCTAAACACCATGATTTGCTCATTTTTAATATTTGAAAAAGGAATATTCATTTCATACCCAGTTCGTTTTTGGAGTCTCTGGTCTTGCTGCCGGTTTGATACCATGGTGTCGTATGAAGTTTACTGGTTCCTGTCACCGTTCACACTTTTCGGGCTTTTTTTTTTCTTTGGTTCCTGGAATGTTTATTAATATATATTTTTTTTACAAATATTATTGATCTAAATATTATTCAACTTTAGAAAGCAAAAAGAAAAAAAAAGGTGAGAAAGGAAAAGAGAAACTATTTATATCGATTAAATGAAATTATTAAAGAGTGGAGAGAAACTAACCCTGAAGATGACACAAGGTTCTTCTATATGGTACGAGGATAACTTAAGTTGCAAGACCTGAAGAGAAGTGAATTTTACACCAGGTAAGGAAACAAGAGAGTCCGAAATGTTGTTGAAGAATTTTTCTTTGTTTCTAAAGCATATTGTTACTTTTGAACAAAAGAAAAAAGGCCCCAAAGGATCGTCTTCTTCTTGTCAACAGGATGACTGTCAAACTCGAAGTAGAGGAAGACGTTAATGTTGACGGTGACAGTTAACTACCAGTTGAAAATATGAATGTTGAAGCCCCTAAAGTCATGAGCAAAGCGAAGAGTGTGGAAGACATGACTTCTTTCTTGATTCGTTCTTGCATTTTGTGGACATGCTTGGGGGTAGCGTCAATTTGGAAGCCTTCATTGAACATGAGCATTAATTCTTTCACGAGTAAACTGCCAAAGGAAGAAGTTGACTTTCTTGGGAATTTTGGATTGCCATATAGCTTTGTAAAAATTAGGCCCATAATATTCTTTCAATTGACGAAAGTCAAAGAATAGGCTGTTATTTAAACCCTGATTTGTTAACCATTCAAGTCAGTTTATCTAGAAAAGAGGCAAAAGAAAAGTTAGGGAGAACAGTGGTGGGAAAGGAAAAGTTAAGAAAAACAATGAAGAGAAGCCATACAAGAACCTTTATGCACCAACATTACAAACAAAACTCATTTTTGCCTCATTTAAACAAAAACTAGAACAGCATAGTTTAATGATTTCAAACCCATTGAGTGAATTAGCTTCCTTAATAAGATACGTGCCAAAGTTCTGAGTGCCTTTTTTCCTTTTCGCTCTTTATTTACATTTTGTGGAAGGAAGGAAAATTTTGGATGCTATTCTTACAGCTTATGAATTATGAAGATATAGGAGAATGAAAAGCTGTGAAAAAGCTACAACAAGGAGGCTTGGTTCTGTCTCAACTCAATTCTTGAGTTTAAGTCATTTGGACATTGGTGGTTCTGTAGATTTCAAACATCTCTTGACTGCAAATTTCTCTATTATTTTTAACAGAAAACTACGAGGCATTCTTTGCTAGGAGAGGTTTTTGACAAGGATCCTTTCCCTTCTCATGTTTTTTTGAGCAAAATCAATTTTTTCATGAAGGAAAATGAGAAAATACCTAATGATGCAAAAGAACAACTTATCAAAAGGAGTTAACCAAAAGCTAAACTAAGATGATTTTTTATTTTATAAAAAGGTTCCAATCCAAATAGGCTGTGAAGATAATTAAATATGTCTTTAGAAAGAGATGCCTTAAGTTAGGCATTAAAACATGGCACGAGACCAGAGTGTTTCCCAAGATTTCTGAAATCTTATTCTCAGGTCCAATTCCGTACAACAAAGGCGGCATGTGGATGACAAAGGACTCGATCCTTCACAAAAATGGAAGGTGAAACAACTTCTTCCCAACCAAAAGCAATAACCTTCTTTACGAGCCAAACAAACACCAAAGGCTCTAAAAGAAGTCCTAGGGCAAATTAAAATACTGGCAAACGATATGCTTTTCTTCAGGTTATCCCATTTTTAGATGAACCTAAGGGTGGTTAGAGCTTGTGGAATACTTTCTCACCGATTAGAGAGGTCCCCTTGGCTTGTAGGTTGCATCTTCTCTTTGTTTTTTAATAATACCTTCTGTTTCTTCACAAAAAGAAACCAAACAAAAAATGGACTTCTTGCTTCTTTGCATTTGAAAGTCTCTTATAAAAAATTATATTACATTCTTTTCTCATTCATTTCAGGACGTGGGATATGATGAGGGTGCTAGGTTTGTGCCAACCTAGTTGGGATGATCCGGTACACCTTTTGACCAATGCTTTGTATATTTTTCAAAAAAAAGGGAAAGAAAAGTCTGCTTTAGCCTTTATACAATTCCTTTCCATGTTGCTTCATTGTATTTTGGCTATTTTCTCAAATTTTTTATTCATTGAAGCCTTAACTGCTTGAAAATTTGAAAATTATTGCCTTGCTCATCTTTGCTTCACTATCAAATGTAAGATCGTTAAGGACAACTCAGTAGGTGCCCACGCTAATTCTTCCAGAATATTACACTCCTGGCCCAGCCTTAGCTATTAGTTTGCTGATCACATTTGATAACCAGGATGAAGAGGAAGAGGGAAGGACATTTTTAATCTCGTTTGTAAAGTAAGTTTATTGTGAAGAGAGGACGGTTTGTTTTGAAAGAAACAAAAACTTTATTTCTATCTATCTCTCTCTCTCTCTACTTTTATTTTTATTTCATAAGAAAAAGAGAATTTCGTTGATGAATGAAATTTTCACCATTGGTGGATCACAAAACCTTTTGACAAAGAGAAGACAGTGGCTAATCTACTTCAGAAGCATCTGATTAAATTTGAACTGTACAGAGTAGATTAGCTGGGCCCCTGTGCAATGACGACATGCCCTGATTAAGTTAACAAAAGACTTTTGGGCTGTAATTGCTTGAATGAGATTTTTGTTTTTGTAGTTCACATTTCTTTTGGCCTTGTTACAAGCCACTCTACTTGGGATTAGGAGATTTCACTTTTCATGATTACACATGATTGATTGTTCCATTGTGCTATGGGGTTTCTTCTTCTATTAATATAACTTTTAAGATCTACATCCTGTTTTCTTTGGATCATTTTTTGTGAACTATACCATGAAAAAATTAGTAAACGAGAGCTCCTCGTTTGGAAAGATCCGGCGATTCTTGTCAAACAGTTCAGCAGAAAACTCTAATGAAAATTGTCCTTAGAAGCCTTTCTCCCCTTTAAATGGGTGCCCTTCAAGTGTAAGAGAGGGGAAGATTAGAGTCATGAAATTGATATCTAACATAAAGTTCGTGTGTGTGTGTATATATTATATCCTTGAGTGTTTGAGCCAGCTTACACGGACATTGACAACCTGCTTGACCCTACAACGTTAGAGTGTCAAGAAAACTGGTAGGAAATTAATTCCTAGGTAGGTGGCTACCATGGATTGAACTCTTGACCTATTAGCCATTTTATTGAGACTATGTCTCTTTTTTACCTTTAGGTCGACCATGATGGTTTATATTTTAGGGTTTTTTTTTTAATATGAACATATTTTATGTTAGATGGTTCACTTGTTAGATTAGTTAAGATTTCCATAAGTTGGCCCACACCCTATGATTAGGAATTAAAATTCCTTTCACCAATAATCAGCTAATGTGTTCTTGAGAATATAACTTAACCTTGAAGATTCTAAATTTCCTCTGGTTATGGGTTTAGCCATGCAATCATCCTGGTTAGGAGTGTACATAAGTCGGGTTGGGCTAGGTTGGAGGAAAATTATGGACCAACCTGAAGTATCTAGGTTGTTTTTCAATACATGGTGAACAAATTCTTATTCAAGGTCCAAGGTGACACACACATGTATTATACATTCAAATTCCAAGTATACAACTTCCATTCAAAAGGAGGTTTACTTTTAGGTTTATATATATATATATACATAATCGGGTTGGGCTGGGTCAACCCGACCCCTTGCACAACCTTGCAACCCGGCTCAATTCTTTTTTCTCTCCAATTTTCTAACCCAACCCAATCCTTATGGTTTGGGTTGGTCACGTTACCAATTTTTTTAACACCCCTAATCTTGGGGTTTTCTCATGTGTATGCATACTTTGTTGGAGTTAGTTTCAAAATGAAACCACTATACCCTTGTCATATTATTGCTCGCACCAATTTCATCTCTATGTGAAGTTTCACAATGTCATTGGACTGACAGATCCCTTTTCTTTGATGTCAGGTTTCATTTGGTGTGCACTACTAACCCATGACTTCTTCTGTCCACGATTATTCTGGTAACTTGATCAATCTCATGTTCCTATGTTATGCTGTTTAGTTTTATATTCTATTTGTAGTTGCATGTTGCTTCTCGATCTTTTGGAAAGAGAATCAATATGTTTTGCTTTCTTTCTTCCTGAATTTTCTACACAGAAATAATGATTTCATCAGTTCATTTGGCTGATACTTCATGTGATTAGTTATTCACTTTGAATTATGTACTATGTGTTATCTCTTTTAATGGCAAATAGAACTTTCATTGAAAGATCAATAAGAATGGGGGGGAGATAGGTAATCTGCCTACTGGCAACTATTGAAGAGAATAGAGTACTTACAAGCAGCTTTTGAGGGTACTCCAAAAGAAGGCAACAAAAAAAAATTAAGACCCGAAGTTCCATCTTGTTAAATTATTAGGTACTTTTTTTAAAGAAAAAAAACTCAGCATTTTAAATTGTAGCAAAAAGAACATGATGGCCAAAATGCTAGCCCTCTTGAAGAAAAGGATGACTGCATGCATGTAGACAAAAAACTCGTTAAATTTCTTGGGATTACAATATAATGGTAAAGCTATTTTTTTAAAAAAAGGAGACAAGCTTTTTTATTATTAATAAACTCAATGTACAGGAGATCTATACAAGGAGAATAATAGGGAAGCCAAGAAAAGAGGGAGAGAAAGAGAGAGGATCAATAGGTGCACCCGGACATCTCAACTAGGTTGACACCCCCATAGCACCCTTATCATATCCAAAATACAAGGAAAAGACCAAAATACAAGAACAATACTAAGGTCATGAAAAGACCATAGTAACCACCAAAAGCTATTGAAAAGACTCCACTACACTTGAATCAAGATTCATGTGCTTGGCATCTTCATTTGAACCCTTGCACATACTGCTTCACTCATTGGATGGGGAAGAATCAAATTCCTTTTGTTGAATGCTATCATTAGTGTCTTTTCAAAGTCTTTCACAATTTGAAGGATCAATCAGTTAGATCACCAAAATAAAAAAAAAAAAAATAAAGACTACAAGAAAAGTCACTCGATTGATCTATTTTCCACCCTTTAGTGTCACTGGCTGAAGCTAGTCAAACACCTTATATGAAATGCATCAAGGTTCTCTCTAACATTTAAGTTTCTTTTCAAGTTCAACAGCTAGAAATATTCCTTTACTGTCAGCTAGTGCATAAATTCTTGCAAAAGGATTGAGAGACCTTCCCCAACACTTAGCATAGTTCTGTTGGTGTTGGTAGTTGCATTTTGTTTTTGAAACCCATGGACTTTCTTGGCTTTCTGTATTGCGTCAAGGAGAATAGAAGTAGTTCGCCCAAAAGAAGACTTGCTATATTTGCTTGCATTAATGCTTTGTCTATTTCTTTTGGGACATACCATGGAAGATATTTGAGCTCCATTTTTTTTGTGATTATATTGTTTTTTAACCCTCCATTTTTTTTTTGTGTGATTATATTGTTTTTTAACCCTCCATTTTTTAATGCTCCCACCCCAACACACACACCAAATGTACCTGATATTATTGGTTGCTTTTGATGGCCACTTCTGTGGCTCAATGGAGTCTATCGATTACTTTGTGATATTGCAATAGTCTTTTTCCTCCAACTGGGATTGAATAAATTTTGCCTCTGAAACTGATTGTTCAGATAATGGTGAGGCCGATGAGCAGCGAAAGTACTCTGAATCTCAGAATCATTCTTCATCGGTCATAAATGGACTAAATCAATCAACCCCAAATCAGTATGTAGCGTCTCCCCAAGTTGGAGCAGGACATTCTATGGTACTATATTTAAAAAACTACTCTTCTTTTCTTAATCTCTTTGTAAAACTTGGTTTTCAAATTCTTTGTTCAAGATTTATGGTTATTTATTTATATTTTCTGAAAAAGATGCAAACTTTGTGTAGATTCAATAAATCAATAGTTTCAAGTAGAAAGAATAAAAGGAAGAAACAGAGAAATTTTCAACCTACCTTTATCGACAGGGAATTTATTATATTAATAGTATATCATTTATTTTTTAACGAAACTGTCTGCTCATTTGGTATCATGAACGATAGTTATGCAGACAATATCAATAACTATCACCATTATTAGTTATATAAGGATGGCTAGTTAATAGAAACTATGTTTTGCAAGTCCACCTGATTAACTCATAATACAACCTTAAGTTTTAGTCATTTTCCTCTGAACACAGTTACCTTTCAGCTCCCATAATACGAATTCGATATGTTTTAGTTACAAATTACAATGGCCTTTCCTCTTGATCTTGGTCCATACGACAGGACTGGCGAGATTGAGACATTAGCCCGATGATGGTTATGTACGATGGTGGCTGATTTTTATTGAACATTTACGGTTATGATAATGCTTCACCAATTCATTGTTTTCTTTTTGCTAGACAAAGAATCTAGTTTCTTGTTGTAATAATTTGTTGGCAGTGACTTTTTTAGAGCTTATTTGACTAATTTGGATTTCTGGGACTTCTATGATGAAGGTACCCCCGGCTTATCCATATCCAGATCCTTATTACAGAAGCATCTTCACCCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTAAGTTTGTCTCTTTTCAATATTGTCAATAACTTTTGTCAACGTTATCCATCGAGACACGAACTATGGTGTATTGACCAAGTCTAGAGATAATTTTCTAGTGTCCAAGAGGTGCACATTAATTTATCCTTTATGTTTGTTGGCTGCGTACTGGAGAACCTTCTGCTTTGAGGAGAAAAACTGAAGGAAATTCACAATTATAACTATAAGTTTACTGTAGACAGATAAAGAAAATGACCCCCTTCCCCTCCCTCCACATACACACACACACACACACACACACAATCAAAGGATAGAAGCAACATGCAGGTCGGAATGGTATAATTACTTTGCTTGAGCTGGGAGGAATGGTTAACTCAATATAGATACAACTATTCAAGGATCATGGATTTCTTAAGCCAAAAAATGAACGGCATCACCATGAAAGGAAGCATAGTTTATCAAATTGTCTTCTCAAATATGAATTATGACTGACTGATTTTGATATAAATGTTTGTTCTACCTTTTCTAGTCGTTTGATTACTAGTTTATTGCTCATTTTAGGTTCATCTTCAATTAATGGGGATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTCAATGCTAAACAGTATCATGGCATTTTACGACGCAGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTCTAAAGTCTAGGAAGGTCTGCAAGCACAAACATTGCCTAATTGTTAAATGCTGGGTGTGCATAATTGTGATAGGCCTCCCATTGTGTATACTTTCCGGTTTTGATACAATATTTCCTTTTATTTCACGCTGCTTCATTCTTTAATTTTTAACTTCCCATTGTATTCACTTACTGGTTTTGATTCACTGGTTCCTTTTCTTTCATGTTGCTTCATTCTTTAGTTTTTAACCGCTTAGCTTCAATATGTTGTGCAGCCATACTTGCATGAATCTCGACATCTACACGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAAAATCATCAAAATGAGGTGGCATCAGGTGATAAATCACAGCCAAATATAAATCTGAATTCTGATAGAAGTGATCTTGCTTCTTCAGAGAACTGATGTCTGAGGCATTGTTGGTGAATGGTGAACAGCACATCTCGACAATTGTAAGGAAATTGAGGTCTCAATACCAGCTTCGGTTGTCTTAGCATTACTTCATCCTTGGTCTATACTAGCAGCATTATAGCATATAGGTTTTGTAGCATGTTGCTTAGGGAGGATTCAAAATGTAGCAAGCAAAAGTATGCAAGTTTTAATACCATCGTAAATACTGAAGTGAGTTAGCCGATTGTTCTGTTTGAGTGGCGGTTGCATTAGGTTTGCAAATATTAGATTCACTGTTTTGTAGTATTAGTTTCTATTTACGTTGCTCCCCACCTCAAAAATAAGTTCAGTGGTTGAATCAAAATGATGGGAACTAGTATTGTAACATATTGGTCCTAGCAGTATTTTCTTATTTTATTTTTTCTGTTTTTAAATGGCAGTTTGTACTATCTTTTGCTGAGAAAAAGGTAAACATTTTTCCTTGGCCATTTTGGTTGTAATGATCCCCAACTTTATATTAGCTGAAAAAGACAACAAATTTGTCTCTAAAGGTAGTCGTCCACTTAAAAAGTCCCCGGTTTTGAGGCCTTATATTTGAATTAGCTTCAACAGATTGGCACAGTACATATTAAAGCTGATGTTGCTGAAACTTTTATGGGATGCTTTGTAATGGAAGGAATGGAGATGGAGTCGACAGGAGGTCAGTTCTGGGCTCCCATGGAATGTACAAAAAGAGTATACATTCGTAGTCTTTGATCTTGTTTTAGGAAGGAAAGGATTGTAGGCAAGTTGATACAGCATCTAAATATCAGTCTTCAAAATTGCTGCAGAAAATAATAGAATCAGCCTTCTATGGCTGGATATTTTGGACTTGTAAATAACGAGACAGTGATTACTAATGCAGTATTTCAACTGTTCTCACAACTTCCCCAATATCTTTTGTTTATTAAACGCTGCAGGAAACAACCTGAACATCTTTTGGTTCTGGTGTGCTGACTTTTTTTCCGTGTCTTTCTTTGTTTTTCTTGTATTGTATCTTATGTCAATAACTTCTATCATTCAGCTTAAGCTGCTCCTAACATGTATCATTCACTTGAGCTACGCATCGTTAAGAGAGCTTAAAACTTGTAAATTCCCATTCATTGATTACATTAAACTTATTATAACATCCATGAAATACTCCATGTATTGTATCAATGGTTGATTATCGAATGTATTTTCTTTGTTAGGCCGATATTGAGCAGTCTGAATTAGAACTCTCGAATGAGAAGGAACCCAAGTATATATCTTATATATTATGAGATGTATCTATTGGTCCAACTCATTTGGTTGGAGTCTACATTTTCTGATCAACAACCATTGAATATCACATGTTATACTAACAGGATCTCAGTGTTGACAGTTTTCTCTTATTTGCTTGGTCCTGGATTAAAGTAGCAGAAGAAGAATTGAGGTAAAATA

mRNA sequence

GAACTGCCCCTCCCCCCCTTTCTCATCGTCGCTCATACACGCGGCCAGAATCCAAAAATCTAATAAATTAAGAAAAGGTTACTATGAGATGAAACACAAATATGCTCTTATTGGATTCCGAGCTTCCTCTGTCCCCTCTTAGAAATCAACCAGAAGAAGAAGAAGAAAGACGACGACGAATTAACTGCAACAAAGCACACACACACTCTCCTCACTTTGTTGCAGCTGAAGCAACTGGGATTTTGGGGGTCACAATTTAACCTACCCCTTCCGCAATTCCCAATTTCCAGGTTTCATTTGGTGTGCACTACTAACCCATGACTTCTTCTGTCCACGATTATTCTGATAATGGTGAGGCCGATGAGCAGCGAAAGTACTCTGAATCTCAGAATCATTCTTCATCGGTCATAAATGGACTAAATCAATCAACCCCAAATCAGTATGTAGCGTCTCCCCAAGTTGGAGCAGGACATTCTATGGTACCCCCGGCTTATCCATATCCAGATCCTTATTACAGAAGCATCTTCACCCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTTCATCTTCAATTAATGGGGATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTCAATGCTAAACAGTATCATGGCATTTTACGACGCAGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTCTAAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATCTACACGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAAAATCATCAAAATGAGGTGGCATCAGGTGATAAATCACAGCCAAATATAAATCTGAATTCTGATAGAAGTGATCTTGCTTCTTCAGAGAACTGATGTCTGAGGCATTGTTGGTGAATGGTGAACAGCACATCTCGACAATTGTAAGGAAATTGAGGTCTCAATACCAGCTTCGGTTGTCTTAGCATTACTTCATCCTTGGTCTATACTAGCAGCATTATAGCATATAGGTTTTGTAGCATGTTGCTTAGGGAGGATTCAAAATGTAGCAAGCAAAAGTATGCAAGTTTTAATACCATCGTAAATACTGAAGTGAGTTAGCCGATTGTTCTGTTTGAGTGGCGGTTGCATTAGGTTTGCAAATATTAGATTCACTGTTTTGTAGTATTAGTTTCTATTTACGTTGCTCCCCACCTCAAAAATAAGTTCAGTGGTTGAATCAAAATGATGGGAACTAGTATTGTAACATATTGGTCCTAGCAGTATTTTCTTATTTTATTTTTTCTGTTTTTAAATGGCAGTTTGTACTATCTTTTGCTGAGAAAAAGGTAAACATTTTTCCTTGGCCATTTTGGTTGTAATGATCCCCAACTTTATATTAGCTGAAAAAGACAACAAATTTGTCTCTAAAGGTAGTCGTCCACTTAAAAAGTCCCCGGTTTTGAGGCCTTATATTTGAATTAGCTTCAACAGATTGGCACAGTACATATTAAAGCTGATGTTGCTGAAACTTTTATGGGATGCTTTGTAATGGAAGGAATGGAGATGGAGTCGACAGGAGGTCAGTTCTGGGCTCCCATGGAATGTACAAAAAGAGTATACATTCGTAGTCTTTGATCTTGTTTTAGGAAGGAAAGGATTGTAGGCAAGTTGATACAGCATCTAAATATCAGTCTTCAAAATTGCTGCAGAAAATAATAGAATCAGCCTTCTATGGCTGGATATTTTGGACTTGTAAATAACGAGACAGTGATTACTAATGCAGTATTTCAACTGTTCTCACAACTTCCCCAATATCTTTTGTTTATTAAACGCTGCAGGAAACAACCTGAACATCTTTTGGTTCTGGTGTGCTGACTTTTTTTCCGTGTCTTTCTTTGTTTTTCTTGTATTGTATCTTATGTCAATAACTTCTATCATTCAGCTTAAGCTGCTCCTAACATGTATCATTCACTTGAGCTACGCATCGTTAAGAGAGCTTAAAACTTGTAAATTCCCATTCATTGATTACATTAAACTTATTATAACATCCATGAAATACTCCATGTATTGTATCAATGGTTGATTATCGAATGTATTTTCTTTGTTAGGCCGATATTGAGCAGTCTGAATTAGAACTCTCGAATGAGAAGGAACCCAAGTATATATCTTATATATTATGAGATGTATCTATTGGTCCAACTCATTTGGTTGGAGTCTACATTTTCTGATCAACAACCATTGAATATCACATGTTATACTAACAGGATCTCAGTGTTGACAGTTTTCTCTTATTTGCTTGGTCCTGGATTAAAGTAGCAGAAGAAGAATTGAGGTAAAATA

Coding sequence (CDS)

ATGACTTCTTCTGTCCACGATTATTCTGATAATGGTGAGGCCGATGAGCAGCGAAAGTACTCTGAATCTCAGAATCATTCTTCATCGGTCATAAATGGACTAAATCAATCAACCCCAAATCAGTATGTAGCGTCTCCCCAAGTTGGAGCAGGACATTCTATGGTACCCCCGGCTTATCCATATCCAGATCCTTATTACAGAAGCATCTTCACCCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTTCATCTTCAATTAATGGGGATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTCAATGCTAAACAGTATCATGGCATTTTACGACGCAGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTCTAAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATCTACACGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAAAATCATCAAAATGAGGTGGCATCAGGTGATAAATCACAGCCAAATATAAATCTGAATTCTGATAGAAGTGATCTTGCTTCTTCAGAGAACTGA

Protein sequence

MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVASGDKSQPNINLNSDRSDLASSEN*

Homology

[Close]

BLAST of CSPI06G36830 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-48
Identity = 114/208 (54.81%), Postives = 141/208 (67.79%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQ--------NHSSSVINGLNQSTPNQYVASPQVGAGH 60
           MTSS+H+ SDN  + E+++  +S          +  S++  L  S P         G  +
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDP---------GTTN 60

Query: 61  SMVPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPV 120
           SM P  YPYPDPYYRSIF P      PPQPY G   VHLQLMG+QQ GVPLP+DAVEEPV
Sbjct: 61  SMAPGQYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPV 120

Query: 121 FVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNE 180
           FVNAKQYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +
Sbjct: 121 FVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKED 180

Query: 181 NHQNEVASGDKSQPNINLNSDRSDLASS 201
            H  + +  +KS    NL++ +S +A+S
Sbjct: 181 EHHEDSSHEEKS----NLSAGKSAMAAS 186

[Close]

BLAST of CSPI06G36830 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.7e-42
Identity = 105/204 (51.47%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP 60
           MTSSVH+ SDN E+  +++  +SQ          ++S     V S  +  G       YP
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHG------LYP 60

Query: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120
           YPDPYYRS+F     Q Y P PY   P V LQLMG+QQ GVPL  DAVEEPVFVNAKQYH
Sbjct: 61  YPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYH 120

Query: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK--NENHQNEV 180
           GILRRRQSRAK E+ N+A+K++KPY+HESRHLHA+RR RGCGGRFL + K   ++ + E 
Sbjct: 121 GILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEE 180

Query: 181 ASGDK--SQPNINLNSDRSDLASS 201
           A+ D+  S+ + +L S++  +A+S
Sbjct: 181 ATSDENTSEASSSLRSEKLAMATS 192

[Close]

BLAST of CSPI06G36830 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.7e-26
Identity = 77/177 (43.50%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 23  SQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYPYPDPYYRSIFTPYDAQPYPPQP 82
           S  +  S+ +G+ Q  P+  +    VG   S      PY DPYY  +   Y   P    P
Sbjct: 94  SDKNQESLHHGITQPPPHPQLVGHTVGWASS-----NPYQDPYYAGVMGAYGHHPLGFVP 153

Query: 83  YGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKALKSR 142
           YGG P           + +PLP +  +EPVFVNAKQY  ILRRRQ+RAKAE E K +KSR
Sbjct: 154 YGGMP----------HSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSR 213

Query: 143 KPYLHESRHLHALRRARGCGGRFLKSNKNE---NHQNEVASGDKSQPNINLNSDRSD 197
           KPYLHESRH HA+RR RG GGRF K    E       E ++G  +Q   + NSD+ +
Sbjct: 214 KPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVTQSPSSSNSDQGE 255

[Close]

BLAST of CSPI06G36830 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.9e-23
Identity = 84/209 (40.19%), Postives = 109/209 (52.15%), Query Frame = 0


Query: 3   SSVHDYSDNGEADEQRKYSESQNHSSSVIN-GLNQSTP--------NQYVASPQVGAGHS 62
           S+  D + NGE D   K S++   S SV N G+  + P        +Q +  P    GH 
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPELVGHY 125

Query: 63  MVPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVF 122
           +     PY DPYY  +   Y  Q    +PY G P          +    LP D  +EPV+
Sbjct: 126 IACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMP----------RERTALPLDMAQEPVY 185

Query: 123 VNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN 182
           VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K  K+E 
Sbjct: 186 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK--KSEV 245

Query: 183 HQNEVASGDKSQPNINLNSDRSDLASSEN 203
              E A G   +     NS  S+   +++
Sbjct: 246 EAGEDAGGRDRERGSATNSSGSEQVETDS 262

[Close]

BLAST of CSPI06G36830 vs. ExPASy Swiss-Prot
Match: Q9LVJ7 (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NFYA6 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-21
Identity = 58/113 (51.33%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 82  PYGGQPMV-HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKAL 141
           PY  Q  V H Q+ G+  + +PLP +  E EP+FVNAKQY  ILRRR+ RAK E++NK +
Sbjct: 141 PYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLI 200

Query: 142 KSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVASGDKSQPNINLNS 193
           K RKPYLHESRHLHAL+R RG GGRFL + K++   + ++      P++  NS
Sbjct: 201 KVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLSPPFLIPPHVFKNS 253

[Close]

BLAST of CSPI06G36830 vs. ExPASy TrEMBL
Match: A0A0A0KIV0 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G525440 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.3e-107
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP 60
           MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP 60

Query: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120
           YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH
Sbjct: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120

Query: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS 180
           GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS
Sbjct: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS 180

Query: 181 GDKSQPNINLNSDRSDLASSEN 203
           GDKSQPNINLNSDRSDLASSEN
Sbjct: 181 GDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of CSPI06G36830 vs. ExPASy TrEMBL
Match: A0A5D3CPM7 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009570 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.6e-106
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP 60
           MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQ TPNQYVASPQVGAGHSMVPPAYP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQPTPNQYVASPQVGAGHSMVPPAYP 60

Query: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120
           YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH
Sbjct: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120

Query: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS 180
           GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS
Sbjct: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS 180

Query: 181 GDKSQPNINLNSDRSDLASSEN 203
           GDKSQPNINLNSDRSDLASSEN
Sbjct: 181 GDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of CSPI06G36830 vs. ExPASy TrEMBL
Match: A0A1S4DTP4 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103484315 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP 60
           MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQ TPNQYVASPQVGAGHSMVPPAYP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQPTPNQYVASPQVGAGHSMVPPAYP 60

Query: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120
           YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH
Sbjct: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120

Query: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS 180
           GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENHQNEVAS
Sbjct: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKXENHQNEVAS 180

Query: 181 GDKSQPNINLNSDRSDLASSEN 203
           GDKSQPNINLNSDRSDLASSEN
Sbjct: 181 GDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of CSPI06G36830 vs. ExPASy TrEMBL
Match: A0A6J1ED47 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111433240 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.5e-99
Identity = 190/205 (92.68%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQ---STPNQYVASPQVGAGHSMVPP 60
           MTSSVHDYSDNGEAD+Q+KYS+S NHSSSVINGLNQ   +TPNQYVA PQVGAGHSM PP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN Q E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSQPNINLNSDRSDLASSEN 203
           VASGDKSQPNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of CSPI06G36830 vs. ExPASy TrEMBL
Match: A0A6J1CZ21 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111015782 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.3e-99
Identity = 191/205 (93.17%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQ---STPNQYVASPQVGAGHSMVPP 60
           MTSSVHDYSDNGEADEQ+KYSESQNHS SVINGLNQ    TPNQYV  PQVGAGH+M PP
Sbjct: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK EN QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180

Query: 181 VASGDKSQPNINLNSDRSDLASSEN 203
           VASG KSQPNINLNSD+SDLASSEN
Sbjct: 181 VASGGKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of CSPI06G36830 vs. NCBI nr
Match: XP_004134622.1 (nuclear transcription factor Y subunit A-7 [Cucumis sativus] >XP_011658320.1 nuclear transcription factor Y subunit A-7 [Cucumis sativus] >XP_031743442.1 nuclear transcription factor Y subunit A-7 [Cucumis sativus] >XP_031743443.1 nuclear transcription factor Y subunit A-7 [Cucumis sativus] >KGN49458.1 hypothetical protein Csa_002841 [Cucumis sativus])

HSP 1 Score: 397.1 bits (1019), Expect = 9.0e-107
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP 60
           MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP 60

Query: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120
           YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH
Sbjct: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120

Query: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS 180
           GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS
Sbjct: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS 180

Query: 181 GDKSQPNINLNSDRSDLASSEN 203
           GDKSQPNINLNSDRSDLASSEN
Sbjct: 181 GDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of CSPI06G36830 vs. NCBI nr
Match: KAA0052492.1 (nuclear transcription factor Y subunit A-7 [Cucumis melo var. makuwa] >TYK13332.1 nuclear transcription factor Y subunit A-7 [Cucumis melo var. makuwa])

HSP 1 Score: 395.2 bits (1014), Expect = 3.4e-106
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP 60
           MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQ TPNQYVASPQVGAGHSMVPPAYP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQPTPNQYVASPQVGAGHSMVPPAYP 60

Query: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120
           YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH
Sbjct: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120

Query: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS 180
           GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS
Sbjct: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS 180

Query: 181 GDKSQPNINLNSDRSDLASSEN 203
           GDKSQPNINLNSDRSDLASSEN
Sbjct: 181 GDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of CSPI06G36830 vs. NCBI nr
Match: XP_016899328.1 (PREDICTED: LOW QUALITY PROTEIN: nuclear transcription factor Y subunit A-7 [Cucumis melo])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP 60
           MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQ TPNQYVASPQVGAGHSMVPPAYP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQPTPNQYVASPQVGAGHSMVPPAYP 60

Query: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120
           YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH
Sbjct: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120

Query: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNEVAS 180
           GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENHQNEVAS
Sbjct: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKXENHQNEVAS 180

Query: 181 GDKSQPNINLNSDRSDLASSEN 203
           GDKSQPNINLNSDRSDLASSEN
Sbjct: 181 GDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of CSPI06G36830 vs. NCBI nr
Match: XP_038883162.1 (nuclear transcription factor Y subunit A-7-like [Benincasa hispida])

HSP 1 Score: 372.5 bits (955), Expect = 2.4e-99
Identity = 191/205 (93.17%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQ---STPNQYVASPQVGAGHSMVPP 60
           MTSSVHDYSDN EADEQ+KYSESQNHSSSVINGLNQ   +TPNQYV S Q+GAGH+M P 
Sbjct: 1   MTSSVHDYSDNAEADEQQKYSESQNHSSSVINGLNQPSIATPNQYVTSTQIGAGHAMAPA 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIFTPY+ QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYEPQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180

Query: 181 VASGDKSQPNINLNSDRSDLASSEN 203
           VASGDKSQPNINLNSDRSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDRSDLASSEN 205

[Close]

BLAST of CSPI06G36830 vs. NCBI nr
Match: XP_022925987.1 (nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_022925988.1 nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_023544362.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo] >XP_023544363.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.1 bits (954), Expect = 3.1e-99
Identity = 190/205 (92.68%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQ---STPNQYVASPQVGAGHSMVPP 60
           MTSSVHDYSDNGEAD+Q+KYS+S NHSSSVINGLNQ   +TPNQYVA PQVGAGHSM PP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           AYP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN Q E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSQPNINLNSDRSDLASSEN 203
           VASGDKSQPNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of CSPI06G36830 vs. TAIR 10
Match: AT1G30500.2 (nuclear factor Y, subunit A7 )

HSP 1 Score: 194.5 bits (493), Expect = 8.2e-50
Identity = 114/208 (54.81%), Postives = 141/208 (67.79%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQ--------NHSSSVINGLNQSTPNQYVASPQVGAGH 60
           MTSS+H+ SDN  + E+++  +S          +  S++  L  S P         G  +
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDP---------GTTN 60

Query: 61  SMVPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPV 120
           SM P  YPYPDPYYRSIF P      PPQPY G   VHLQLMG+QQ GVPLP+DAVEEPV
Sbjct: 61  SMAPGQYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPV 120

Query: 121 FVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNE 180
           FVNAKQYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +
Sbjct: 121 FVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKED 180

Query: 181 NHQNEVASGDKSQPNINLNSDRSDLASS 201
            H  + +  +KS    NL++ +S +A+S
Sbjct: 181 EHHEDSSHEEKS----NLSAGKSAMAAS 186

[Close]

BLAST of CSPI06G36830 vs. TAIR 10
Match: AT1G30500.1 (nuclear factor Y, subunit A7 )

HSP 1 Score: 184.9 bits (468), Expect = 6.5e-47
Identity = 110/208 (52.88%), Postives = 137/208 (65.87%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQ--------NHSSSVINGLNQSTPNQYVASPQVGAGH 60
           MTSS+H+ SDN  + E+++  +S          +  S++  L  S P         G  +
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDP---------GTTN 60

Query: 61  SMVPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPV 120
           SM P  YPYPDPYYRSIF P      PPQPY G       LMG+QQ GVPLP+DAVEEPV
Sbjct: 61  SMAPGQYPYPDPYYRSIFAP------PPQPYTG-------LMGVQQQGVPLPSDAVEEPV 120

Query: 121 FVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNE 180
           FVNAKQYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +
Sbjct: 121 FVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKED 180

Query: 181 NHQNEVASGDKSQPNINLNSDRSDLASS 201
            H  + +  +KS    NL++ +S +A+S
Sbjct: 181 EHHEDSSHEEKS----NLSAGKSAMAAS 182

[Close]

BLAST of CSPI06G36830 vs. TAIR 10
Match: AT2G34720.1 (nuclear factor Y, subunit A4 )

HSP 1 Score: 172.6 bits (436), Expect = 3.3e-43
Identity = 105/204 (51.47%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYP 60
           MTSSVH+ SDN E+  +++  +SQ          ++S     V S  +  G       YP
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHG------LYP 60

Query: 61  YPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYH 120
           YPDPYYRS+F     Q Y P PY   P V LQLMG+QQ GVPL  DAVEEPVFVNAKQYH
Sbjct: 61  YPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYH 120

Query: 121 GILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK--NENHQNEV 180
           GILRRRQSRAK E+ N+A+K++KPY+HESRHLHA+RR RGCGGRFL + K   ++ + E 
Sbjct: 121 GILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEE 180

Query: 181 ASGDK--SQPNINLNSDRSDLASS 201
           A+ D+  S+ + +L S++  +A+S
Sbjct: 181 ATSDENTSEASSSLRSEKLAMATS 192

[Close]

BLAST of CSPI06G36830 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 119.4 bits (298), Expect = 3.4e-27
Identity = 77/177 (43.50%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 23  SQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYPYPDPYYRSIFTPYDAQPYPPQP 82
           S  +  S+ +G+ Q  P+  +    VG   S      PY DPYY  +   Y   P    P
Sbjct: 94  SDKNQESLHHGITQPPPHPQLVGHTVGWASS-----NPYQDPYYAGVMGAYGHHPLGFVP 153

Query: 83  YGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKALKSR 142
           YGG P           + +PLP +  +EPVFVNAKQY  ILRRRQ+RAKAE E K +KSR
Sbjct: 154 YGGMP----------HSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSR 213

Query: 143 KPYLHESRHLHALRRARGCGGRFLKSNKNE---NHQNEVASGDKSQPNINLNSDRSD 197
           KPYLHESRH HA+RR RG GGRF K    E       E ++G  +Q   + NSD+ +
Sbjct: 214 KPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVTQSPSSSNSDQGE 255

[Close]

BLAST of CSPI06G36830 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 109.4 bits (272), Expect = 3.5e-24
Identity = 84/209 (40.19%), Postives = 109/209 (52.15%), Query Frame = 0


Query: 3   SSVHDYSDNGEADEQRKYSESQNHSSSVIN-GLNQSTP--------NQYVASPQVGAGHS 62
           S+  D + NGE D   K S++   S SV N G+  + P        +Q +  P    GH 
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPELVGHY 125

Query: 63  MVPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVF 122
           +     PY DPYY  +   Y  Q    +PY G P          +    LP D  +EPV+
Sbjct: 126 IACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMP----------RERTALPLDMAQEPVY 185

Query: 123 VNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN 182
           VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K  K+E 
Sbjct: 186 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK--KSEV 245

Query: 183 HQNEVASGDKSQPNINLNSDRSDLASSEN 203
              E A G   +     NS  S+   +++
Sbjct: 246 EAGEDAGGRDRERGSATNSSGSEQVETDS 262

The following BLAST results are available for this feature:

BLAST of CSPI06G36830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JP1	1.2e-48	54.81	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	4.7e-42	51.47	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	4.7e-26	43.50	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LXV5	4.9e-23	40.19	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LVJ7	2.1e-21	51.33	Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CSPI06G36830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIV0	4.3e-107	100.00	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G52544...	[more]
A0A5D3CPM7	1.6e-106	99.50	Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DTP4	1.1e-105	99.01	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103484315 P...	[more]
A0A6J1ED47	1.5e-99	92.68	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1CZ21	4.3e-99	93.17	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CSPI06G36830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134622.1	9.0e-107	100.00	nuclear transcription factor Y subunit A-7 [Cucumis sativus] >XP_011658320.1 nuc...	[more]
KAA0052492.1	3.4e-106	99.50	nuclear transcription factor Y subunit A-7 [Cucumis melo var. makuwa] >TYK13332....	[more]
XP_016899328.1	2.2e-105	99.01	PREDICTED: LOW QUALITY PROTEIN: nuclear transcription factor Y subunit A-7 [Cucu...	[more]
XP_038883162.1	2.4e-99	93.17	nuclear transcription factor Y subunit A-7-like [Benincasa hispida]	[more]
XP_022925987.1	3.1e-99	92.68	nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_022925988.1 ...	[more]

BLAST of CSPI06G36830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30500.2	8.2e-50	54.81	nuclear factor Y, subunit A7	[more]
AT1G30500.1	6.5e-47	52.88	nuclear factor Y, subunit A7	[more]
AT2G34720.1	3.3e-43	51.47	nuclear factor Y, subunit A4	[more]
AT3G20910.1	3.4e-27	43.50	nuclear factor Y, subunit A9	[more]
AT5G12840.1	3.5e-24	40.19	nuclear factor Y, subunit A1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 111..133 score: 73.91 coord: 142..165 score: 78.01
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 107..168 e-value: 4.2E-35 score: 132.6
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 110..165 e-value: 4.0E-26 score: 91.4
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 1..183
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 108..168 score: 36.842766
None	No IPR available	GENE3D	6.10.250.2430		coord: 108..169 e-value: 2.8E-31 score: 109.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..202
None	No IPR available	PANTHER	PTHR12632:SF66	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7	coord: 1..183
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 113..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G36830.1	CSPI06G36830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity