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CSPI06G34260 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCTCTTCATCCCCATTTTCCCATTTCTCATTGCCATTCTTCTTCTCTCGCCGTCTATCTCTCTCGCCACCGCCCGGAAGGACGGCGGCTTCGATGGCATGTTCGGACCCGGGAACGGATTTGGCGACATACCCGGCTTTGGAAAGGGTTGGGACAAGGGGATCATCGGCGGGGGATACGGCGGCGGCTACGGTGGCCCCAAAGGCGGTTACGGCAAGGGTGGTATCATAAGAAATTCTGTGGTTTGTAAACTTAAGGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCTAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGTTACGGCGGGGGGGGGGGGGGGGGGGGGGGGGGCCAAAGGCGGTTACGGCAAGGGTGGTATCATAAGAAATTCTGTGGTTTGTAAACTTAAGGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCTAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGTTACGGCGGTGGAGGTGGCGGCGGTGGCTGTACCATCGATTGTACTAAGAAATGTATCGGCTATTGTTAG ATGAATCTCTTCATCCCCATTTTCCCATTTCTCATTGCCATTCTTCTTCTCTCGCCGTCTATCTCTCTCGCCACCGCCCGGAAGGACGGCGGCTTCGATGGCATGTTCGGACCCGGGAACGGATTTGGCGACATACCCGGCTTTGGAAAGGGTTGGGACAAGGGGATCATCGGCGGGGGATACGGCGGCGGCTACGGTGGCCCCAAAGGCGGTTACGGCAAGGGTGGTATCATAAGAAATTCTGTGGTTTGTAAACTTAAGGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCTAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGCGGTTACGGCAAGGGTGGTATCATAAGAAATTCTGTGGTTTGTAAACTTAAGGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCTAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGTTACGGCGGTGGAGGTGGCGGCGGTGGCTGTACCATCGATTGTACTAAGAAATGTATCGGCTATTGTTAG ATGAATCTCTTCATCCCCATTTTCCCATTTCTCATTGCCATTCTTCTTCTCTCGCCGTCTATCTCTCTCGCCACCGCCCGGAAGGACGGCGGCTTCGATGGCATGTTCGGACCCGGGAACGGATTTGGCGACATACCCGGCTTTGGAAAGGGTTGGGACAAGGGGATCATCGGCGGGGGATACGGCGGCGGCTACGGTGGCCCCAAAGGCGGTTACGGCAAGGGTGGTATCATAAGAAATTCTGTGGTTTGTAAACTTAAGGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCTAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGCGGTTACGGCAAGGGTGGTATCATAAGAAATTCTGTGGTTTGTAAACTTAAGGGTCCTTGTTACAATAAGAAGGTGACTTGTCCGGCTAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGTTACGGCGGTGGAGGTGGCGGCGGTGGCTGTACCATCGATTGTACTAAGAAATGTATCGGCTATTGTTAG MNLFIPIFPFLIAILLLSPSISLATARKDGGFDGMFGPGNGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNSVVCKLKGPCYNKKVTCPAKCFSSYSRSGKGGYGKGGIIRNSVVCKLKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC* Homology
BLAST of CSPI06G34260 vs. ExPASy TrEMBL
Match: A0A0A0KHJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516980 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.9e-63 Identity = 132/174 (75.86%), Postives = 133/174 (76.44%), Query Frame = 0
BLAST of CSPI06G34260 vs. ExPASy TrEMBL
Match: A0A5A7UGS4 (Ctenidin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003320 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 7.1e-58 Identity = 122/174 (70.11%), Postives = 126/174 (72.41%), Query Frame = 0
BLAST of CSPI06G34260 vs. ExPASy TrEMBL
Match: A0A1S3AZW7 (ctenidin-3-like OS=Cucumis melo OX=3656 GN=LOC103484551 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 7.1e-58 Identity = 122/174 (70.11%), Postives = 126/174 (72.41%), Query Frame = 0
BLAST of CSPI06G34260 vs. ExPASy TrEMBL
Match: A0A5D3CRS6 (Ctenidin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007150 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 9.3e-58 Identity = 121/174 (69.54%), Postives = 126/174 (72.41%), Query Frame = 0
BLAST of CSPI06G34260 vs. ExPASy TrEMBL
Match: A0A6J1EFI3 (neuropeptide-like protein 31 OS=Cucurbita moschata OX=3662 GN=LOC111433724 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 3.4e-52 Identity = 116/176 (65.91%), Postives = 122/176 (69.32%), Query Frame = 0
BLAST of CSPI06G34260 vs. NCBI nr
Match: XP_004134728.1 (ctenidin-3 [Cucumis sativus] >KGN49190.1 hypothetical protein Csa_003176 [Cucumis sativus]) HSP 1 Score: 251.9 bits (642), Expect = 4.0e-63 Identity = 132/174 (75.86%), Postives = 133/174 (76.44%), Query Frame = 0
BLAST of CSPI06G34260 vs. NCBI nr
Match: XP_008439905.1 (PREDICTED: ctenidin-3-like [Cucumis melo] >KAA0052719.1 ctenidin-3-like [Cucumis melo var. makuwa]) HSP 1 Score: 233.4 bits (594), Expect = 1.5e-57 Identity = 122/174 (70.11%), Postives = 126/174 (72.41%), Query Frame = 0
BLAST of CSPI06G34260 vs. NCBI nr
Match: TYK13106.1 (ctenidin-3-like [Cucumis melo var. makuwa]) HSP 1 Score: 233.0 bits (593), Expect = 1.9e-57 Identity = 121/174 (69.54%), Postives = 126/174 (72.41%), Query Frame = 0
BLAST of CSPI06G34260 vs. NCBI nr
Match: XP_038881254.1 (ctenidin-3 [Benincasa hispida]) HSP 1 Score: 229.2 bits (583), Expect = 2.8e-56 Identity = 120/174 (68.97%), Postives = 125/174 (71.84%), Query Frame = 0
BLAST of CSPI06G34260 vs. NCBI nr
Match: XP_022926656.1 (neuropeptide-like protein 31 [Cucurbita moschata] >KAG6594623.1 hypothetical protein SDJN03_11176, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026592.1 hypothetical protein SDJN02_10594, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214.5 bits (545), Expect = 7.1e-52 Identity = 116/176 (65.91%), Postives = 122/176 (69.32%), Query Frame = 0
BLAST of CSPI06G34260 vs. TAIR 10
Match: AT4G21620.1 (glycine-rich protein ) HSP 1 Score: 129.8 bits (325), Expect = 2.1e-30 Identity = 78/165 (47.27%), Postives = 94/165 (56.97%), Query Frame = 0
BLAST of CSPI06G34260 vs. TAIR 10
Match: AT4G21620.2 (glycine-rich protein ) HSP 1 Score: 115.2 bits (287), Expect = 5.5e-26 Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 0
BLAST of CSPI06G34260 vs. TAIR 10
Match: AT1G61255.1 (BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 90.5 bits (223), Expect = 1.4e-18 Identity = 57/112 (50.89%), Postives = 63/112 (56.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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