CSPI06G34000 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G34000
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr6: 28049461 .. 28050919 (-)
RNA-Seq Expression	CSPI06G34000
Synteny	CSPI06G34000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTCCTTCGGTTGAAAACATGTCTTCCTCTTCCCCCTTCCGTCGTCTCCATTGCCTCTTCAACCATTCTCGTTCCCCCACACCCGCATTCAACAAACCCAACCTGTCGCTTTCTTCCTTAGCTACCAAAAAATCCAAAAAATCCTCCACCGCCACTCCTCTCACCGACGAAAATCGTCTTCAAAAGCTCGTTCAAAGGTTCATTATCAACTCCGAGTCCAAACAATTCCGCCGCAAGAACGACACCTATGATTCTACAGTTCGCTTTCTTGCTGTTCGTAAAAAATTTTCCATGATTGAAGAAATTATAGAAGCCCAGAAGAAGTATGACGAAATTAAAGAAGAAGGTTTTGTGATCCGCCTCATTAGGCTCTATGGGAAAGCAGGCATGTTCTCTCAGGCGCGCAAGTTGTTCGATGAATTGCCTGAACTGAAGTGCGAGCGGACTGTAAGGTCTTTTAATGCCCTTTTGGTTTCTTGTGTTAAATCCAAGGAATTTGATCAAGTTGAAAAGATTTTTAGGGAGGTGCCACAGGAACTTTCGATAGAAGCAGATGTGTCATCGTATAATATTGTTATCAATGCTTACTGCGAGATGGACGATTTTGATAAAGCCATCTTGTTCTTCAATCACATGGAGAAGAATGGAATGGAGCCAGATTTGGTTACATTCAATACGCTTTTAACTGCACTCTATAGAAAGGGTCAGTTCTTAGATGGAGAAAGCATGTGGGCTAGGATGGAAAACAAGAACATTGCTCCTGATCTAGTAAGTTACAATGCGAGGTTGCGAGGAATGGTTCTAGACAAGAGAATTCAAGATGGGATTGAGTTGCTAGCTAAAATGGAGGAGAAGGAAATCAAGCCAGATGTGCACATTTACAATACTCTGATTACAAGCTTTTGTAAAGACGGGGATTTGGAGGAAGCCAAAAAATGGTATTACAAATTGAAGGAGAGTGAAGTTGATCCAAATGCAACGACTTACAGAACAATTCTCCCCTTGCTTTGCGAGAAGGGTGATTTTGATTCTGGACTTCAGCTGTGCAAGGAAGCCATTAATAAAAGATTCGTTTTTCATACAGCGGAGGTGCAGCGTGTGGTTGATGGATTGGCCGAAGTTTCCAAGACTGAAGAAGCAAAGGACCTTGTGGAGCTCTACAATTCTAAGAATAATTTAAAATTCAAATTGAAATTGCCTCAGAACAGCACTTGAAAAGATGGTTTTACTTCTGTGTGACTTCGGCTTCAATTTTAAACTGTTTGTTAAATTGACCATCCTTTTCATCTTCTTCAGTGGGAAATTTGATTGAAGAGGGATCTGAATGTATTTTTCTTGAGTTTTTTTTTTTTTTTTTTAATGCTTATTATGGATCGTCAATTAGGAAGAAAGTTTTTTTGTAACTTTTGGCACCTGGATGAGAATGAAACTAATGAAAGAATAATTTCATTATTCTG

mRNA sequence

GTTTTCCTTCGGTTGAAAACATGTCTTCCTCTTCCCCCTTCCGTCGTCTCCATTGCCTCTTCAACCATTCTCGTTCCCCCACACCCGCATTCAACAAACCCAACCTGTCGCTTTCTTCCTTAGCTACCAAAAAATCCAAAAAATCCTCCACCGCCACTCCTCTCACCGACGAAAATCGTCTTCAAAAGCTCGTTCAAAGGTTCATTATCAACTCCGAGTCCAAACAATTCCGCCGCAAGAACGACACCTATGATTCTACAGTTCGCTTTCTTGCTGTTCGTAAAAAATTTTCCATGATTGAAGAAATTATAGAAGCCCAGAAGAAGTATGACGAAATTAAAGAAGAAGGTTTTGTGATCCGCCTCATTAGGCTCTATGGGAAAGCAGGCATGTTCTCTCAGGCGCGCAAGTTGTTCGATGAATTGCCTGAACTGAAGTGCGAGCGGACTGTAAGGTCTTTTAATGCCCTTTTGGTTTCTTGTGTTAAATCCAAGGAATTTGATCAAGTTGAAAAGATTTTTAGGGAGGTGCCACAGGAACTTTCGATAGAAGCAGATGTGTCATCGTATAATATTGTTATCAATGCTTACTGCGAGATGGACGATTTTGATAAAGCCATCTTGTTCTTCAATCACATGGAGAAGAATGGAATGGAGCCAGATTTGGTTACATTCAATACGCTTTTAACTGCACTCTATAGAAAGGGTCAGTTCTTAGATGGAGAAAGCATGTGGGCTAGGATGGAAAACAAGAACATTGCTCCTGATCTAGTAAGTTACAATGCGAGGTTGCGAGGAATGGTTCTAGACAAGAGAATTCAAGATGGGATTGAGTTGCTAGCTAAAATGGAGGAGAAGGAAATCAAGCCAGATGTGCACATTTACAATACTCTGATTACAAGCTTTTGTAAAGACGGGGATTTGGAGGAAGCCAAAAAATGGTATTACAAATTGAAGGAGAGTGAAGTTGATCCAAATGCAACGACTTACAGAACAATTCTCCCCTTGCTTTGCGAGAAGGGTGATTTTGATTCTGGACTTCAGCTGTGCAAGGAAGCCATTAATAAAAGATTCGTTTTTCATACAGCGGAGGTGCAGCGTGTGGTTGATGGATTGGCCGAAGTTTCCAAGACTGAAGAAGCAAAGGACCTTGTGGAGCTCTACAATTCTAAGAATAATTTAAAATTCAAATTGAAATTGCCTCAGAACAGCACTTGAAAAGATGGTTTTACTTCTGTGTGACTTCGGCTTCAATTTTAAACTGTTTGTTAAATTGACCATCCTTTTCATCTTCTTCAGTGGGAAATTTGATTGAAGAGGGATCTGAATGTATTTTTCTTGAGTTTTTTTTTTTTTTTTTTAATGCTTATTATGGATCGTCAATTAGGAAGAAAGTTTTTTTGTAACTTTTGGCACCTGGATGAGAATGAAACTAATGAAAGAATAATTTCATTATTCTG

Coding sequence (CDS)

ATGTCTTCCTCTTCCCCCTTCCGTCGTCTCCATTGCCTCTTCAACCATTCTCGTTCCCCCACACCCGCATTCAACAAACCCAACCTGTCGCTTTCTTCCTTAGCTACCAAAAAATCCAAAAAATCCTCCACCGCCACTCCTCTCACCGACGAAAATCGTCTTCAAAAGCTCGTTCAAAGGTTCATTATCAACTCCGAGTCCAAACAATTCCGCCGCAAGAACGACACCTATGATTCTACAGTTCGCTTTCTTGCTGTTCGTAAAAAATTTTCCATGATTGAAGAAATTATAGAAGCCCAGAAGAAGTATGACGAAATTAAAGAAGAAGGTTTTGTGATCCGCCTCATTAGGCTCTATGGGAAAGCAGGCATGTTCTCTCAGGCGCGCAAGTTGTTCGATGAATTGCCTGAACTGAAGTGCGAGCGGACTGTAAGGTCTTTTAATGCCCTTTTGGTTTCTTGTGTTAAATCCAAGGAATTTGATCAAGTTGAAAAGATTTTTAGGGAGGTGCCACAGGAACTTTCGATAGAAGCAGATGTGTCATCGTATAATATTGTTATCAATGCTTACTGCGAGATGGACGATTTTGATAAAGCCATCTTGTTCTTCAATCACATGGAGAAGAATGGAATGGAGCCAGATTTGGTTACATTCAATACGCTTTTAACTGCACTCTATAGAAAGGGTCAGTTCTTAGATGGAGAAAGCATGTGGGCTAGGATGGAAAACAAGAACATTGCTCCTGATCTAGTAAGTTACAATGCGAGGTTGCGAGGAATGGTTCTAGACAAGAGAATTCAAGATGGGATTGAGTTGCTAGCTAAAATGGAGGAGAAGGAAATCAAGCCAGATGTGCACATTTACAATACTCTGATTACAAGCTTTTGTAAAGACGGGGATTTGGAGGAAGCCAAAAAATGGTATTACAAATTGAAGGAGAGTGAAGTTGATCCAAATGCAACGACTTACAGAACAATTCTCCCCTTGCTTTGCGAGAAGGGTGATTTTGATTCTGGACTTCAGCTGTGCAAGGAAGCCATTAATAAAAGATTCGTTTTTCATACAGCGGAGGTGCAGCGTGTGGTTGATGGATTGGCCGAAGTTTCCAAGACTGAAGAAGCAAAGGACCTTGTGGAGCTCTACAATTCTAAGAATAATTTAAAATTCAAATTGAAATTGCCTCAGAACAGCACTTGA

Protein sequence

MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST*

Homology

[Close]

BLAST of CSPI06G34000 vs. ExPASy Swiss-Prot
Match: Q9LK57 (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g13160 PE=1 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 5.4e-82
Identity = 153/362 (42.27%), Postives = 231/362 (63.81%), Query Frame = 0


Query: 32  SSLATKKSKKSSTATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFS 91
           ++ AT    K S  T + DE   + + ++F    +++ FR+    Y+ TVR LA  KKF 
Sbjct: 29  AAAATPSPPKPSLITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFE 88

Query: 92  MIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALL 151
            +EEI+E Q KY  + +EGFV R+I LYG+ GMF  A+K+FDE+PE  C+RT  SFNALL
Sbjct: 89  WVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALL 148

Query: 152 VSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGM 211
            +CV SK+FD VE IF+E+P +LSIE DV+SYN +I   C    F +A+   + +E  G+
Sbjct: 149 NACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGL 208

Query: 212 EPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIE 271
           +PD +TFN LL   Y KG+F +GE +WARM  KN+  D+ SYNARL G+ ++ + ++ + 
Sbjct: 209 KPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVS 268

Query: 272 LLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTILPLLC 331
           L  K++  E+KPDV  +  +I  F  +G L+EA  WY +++++   P    + ++LP +C
Sbjct: 269 LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC 328

Query: 332 EKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVELYNSKNNLKFKL 391
           + GD +S  +LCKE   KR +   A +Q VVD L + SK +EA+++VEL  + + L+ KL
Sbjct: 329 KAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDYLQCKL 388

Query: 392 KL 394
           +L
Sbjct: 389 RL 390

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BLAST of CSPI06G34000 vs. ExPASy Swiss-Prot
Match: Q9LK58 (Pentatricopeptide repeat-containing protein At3g13150 OS=Arabidopsis thaliana OX=3702 GN=At3g13150 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.8e-80
Identity = 157/387 (40.57%), Postives = 238/387 (61.50%), Query Frame = 0


Query: 4   SSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTAT-----------PLTDEN 63
           SS + RLH +F  S   T    KP     S       K+STA+             +  +
Sbjct: 6   SSLYSRLHGIFKESSIATAKSAKPRSQTKSTKFPSKLKASTASVGDGGQSSNDAKDSKNS 65

Query: 64  RLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFV 123
           +L + V++F  + ES+ FR+ +  Y + +R L   KKFS I+E+++ QKK+D+IK E FV
Sbjct: 66  KLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFV 125

Query: 124 IRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQ 183
           IR++ LYG +GM   A KLFDE+PEL CERTV+SFNALL + V SK+ D+  K F+E+P+
Sbjct: 126 IRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPE 185

Query: 184 ELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFL 243
           +L I  D+ +YN +I A C     D  +  F  +EKNG EPDL++FNTLL   YR+  F+
Sbjct: 186 KLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFV 245

Query: 244 DGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLI 303
           +G+ +W  M++KN++P++ SYN+R+RG+  +K+  D + L+  M+ + I PDVH YN LI
Sbjct: 246 EGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI 305

Query: 304 TSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFV 363
           T++  D +LEE  K Y ++KE  + P+  TY  ++PLLC+KGD D  +++ +EAI  + +
Sbjct: 306 TAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365

Query: 364 FHTAEVQRVVDGLAEVSKTEEAKDLVE 380
                 + VV+ L    K +EA  LV+
Sbjct: 366 SRPNMYKPVVERLMGAGKIDEATQLVK 392

[Close]

BLAST of CSPI06G34000 vs. ExPASy Swiss-Prot
Match: Q9LG23 (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.5e-79
Identity = 151/374 (40.37%), Postives = 237/374 (63.37%), Query Frame = 0


Query: 21  TPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDST 80
           T A + P  SL+SL             +  E   +++V++F    ES++FR     YD T
Sbjct: 34  TAAISPPQKSLTSL-------------VNGERNPKRIVEKFKKACESERFRTNIAVYDRT 93

Query: 81  VRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKC 140
           VR L   K+   +EEI+E QKKY ++ +EGF  R+I LYGKAGMF  A+K+F+E+P   C
Sbjct: 94  VRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDC 153

Query: 141 ERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAI 200
           +R+V SFNALL +   SK+FD VE++F E+P +LSI+ D+ SYN +I A CE D   +A+
Sbjct: 154 KRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAV 213

Query: 201 LFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGM 260
              + +E  G++PD+VTFNTLL + Y KGQF  GE +WA+M  KN+A D+ +YNARL G+
Sbjct: 214 ALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGL 273

Query: 261 VLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNA 320
             + + ++ + L  +++   +KPDV  +N +I     +G ++EA+ WY ++ +    P+ 
Sbjct: 274 ANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDK 333

Query: 321 TTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVEL 380
            T+  +LP +C+ GDF+S ++L KE  +KR++     +Q++VD L + SK EEA+++V++
Sbjct: 334 ATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKI 393

Query: 381 YNSKNNLKFKLKLP 395
             + + LK KL LP
Sbjct: 394 AKTNDFLKLKLNLP 394

[Close]

BLAST of CSPI06G34000 vs. ExPASy Swiss-Prot
Match: Q9M065 (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.8e-49
Identity = 122/348 (35.06%), Postives = 191/348 (54.89%), Query Frame = 0


Query: 39  SKKSSTATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIE 98
           SK  ST     D ++  K+      +S S    R     + TVR LA  ++FS IE +IE
Sbjct: 34  SKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRY--AQELTVRRLAKCRRFSDIETLIE 93

Query: 99  AQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSK 158
           + K   +IKEE F   LIR YG+A MF+ A + F+++ +    R+  SFNALL +C+ SK
Sbjct: 94  SHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSK 153

Query: 159 EFDQVEKIFREVPQELS-IEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVT 218
            FD+V ++F E+PQ  + I  D  SY I+I +YC+    +KAI     M+  GME   + 
Sbjct: 154 NFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIA 213

Query: 219 FNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGI-ELLAKM 278
           F T+L++LY+KG+    +++W  M  K    D  +YN R+  M   K   + + EL+ +M
Sbjct: 214 FTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI--MSAQKESPERVKELIEEM 273

Query: 279 EEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDF 338
               +KPD   YN L+T++C+ G L+EAKK Y  L+ +   PNA T+RT++  LC    +
Sbjct: 274 SSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLY 333

Query: 339 DSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVELYNSK 385
           + G  + K+++    +     ++ +V GL E  K ++AK L+     K
Sbjct: 334 EQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377

[Close]

BLAST of CSPI06G34000 vs. ExPASy Swiss-Prot
Match: Q8GW57 (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 8.6e-48
Identity = 103/337 (30.56%), Postives = 183/337 (54.30%), Query Frame = 0


Query: 48  LTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIK 107
           L  E   +KL   F  N+ ++        ++ TV  LA   +   IE+++E QK   + +
Sbjct: 45  LKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGR 104

Query: 108 EEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIF 167
            EGF++R+I LYGKAGM  QA   F  +    C+R+V+SFNA L     + +   + +  
Sbjct: 105 REGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFL 164

Query: 168 REVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYR 227
            + P +  I+ D  S+NI I ++CE+   D A +    MEK+G+ PD+VT+ TL++ALY+
Sbjct: 165 HDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYK 224

Query: 228 KGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHI 287
             + + G  +W  M  K   P+L ++N R++ +V  +R  D  +LL  M + +++PD   
Sbjct: 225 HERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSIT 284

Query: 288 YNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAI 347
           YN +I  F      + A++ Y  +      PN   Y+T++  LC+ G+FD    +CK+ +
Sbjct: 285 YNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCM 344

Query: 348 NKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVELYNSK 385
            K++  +   V+ ++ GL +  + ++AK ++EL + +
Sbjct: 345 RKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381

[Close]

BLAST of CSPI06G34000 vs. ExPASy TrEMBL
Match: A0A0A0KK06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516720 PE=4 SV=1)

HSP 1 Score: 776.5 bits (2004), Expect = 5.2e-221
Identity = 394/398 (98.99%), Postives = 395/398 (99.25%), Query Frame = 0


Query: 1   MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQR 60
           MSSSSPFRRLHCLFNHSRSP PAFNKPNLSLSSLATKKSKKS TATPLTDENRLQKLVQR
Sbjct: 1   MSSSSPFRRLHCLFNHSRSPAPAFNKPNLSLSSLATKKSKKSPTATPLTDENRLQKLVQR 60

Query: 61  FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG 120
           FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG
Sbjct: 61  FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG 120

Query: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV 180
           KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV
Sbjct: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV 180

Query: 181 SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR 240
           SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR
Sbjct: 181 SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR 240

Query: 241 MENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 300
           MENKNI PDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD
Sbjct: 241 MENKNIVPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 300

Query: 301 LEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 360
           LEEAKKWYYKLKESEVDPNATTYRT+LPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR
Sbjct: 301 LEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 360

Query: 361 VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 399
           VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST
Sbjct: 361 VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 398

[Close]

BLAST of CSPI06G34000 vs. ExPASy TrEMBL
Match: A0A5D3CPX8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006920 PE=4 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 5.6e-175
Identity = 323/398 (81.16%), Postives = 344/398 (86.43%), Query Frame = 0


Query: 1   MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQR 60
           MSSSS FRRLH +FNHSRSPT  FNKPNLSL S ATKKS KS  ATPLT E  LQ+L  +
Sbjct: 1   MSSSSLFRRLHGIFNHSRSPTRIFNKPNLSLPSSATKKSNKSPAATPLTAEQGLQELANK 60

Query: 61  FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG 120
           FI NSESK FRRK  TYD T+R LAVRK FSMIE+IIEAQKKY++IK+EGF  RLI LYG
Sbjct: 61  FIKNSESKLFRRKKGTYDYTIRLLAVRKSFSMIEDIIEAQKKYEDIKDEGFATRLIMLYG 120

Query: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV 180
           KAGM S ARKLFDELP L CERTVRSFNALL SCV SKEFDQVEKIFREVP+ELSIEADV
Sbjct: 121 KAGMLSHARKLFDELPALNCERTVRSFNALLSSCVNSKEFDQVEKIFREVPRELSIEADV 180

Query: 181 SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR 240
            SYNIVINAYCEMD  DKAILFFN MEKNGMEPDLVTFNTLL ALYRKGQF DGESMWA 
Sbjct: 181 RSYNIVINAYCEMDALDKAILFFNDMEKNGMEPDLVTFNTLLAALYRKGQFSDGESMWAM 240

Query: 241 MENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 300
           ME+KNIAP+L+SYNARLRGMVL+KRIQDGIELLA+MEEKEIKPDV+ YN LI  FC+DGD
Sbjct: 241 MESKNIAPNLISYNARLRGMVLEKRIQDGIELLAEMEEKEIKPDVYSYNILIKGFCEDGD 300

Query: 301 LEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 360
           LEEAKKWY KLKESEV PNA+TY T+L LLCE+GDFD GLQLCKEAI+   VFHTAEVQR
Sbjct: 301 LEEAKKWYDKLKESEVVPNASTYATLLSLLCEQGDFDFGLQLCKEAIDNGLVFHTAEVQR 360

Query: 361 VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 399
           VVDGLAE SK EEA DLVELYNS + LKFKLKLPQNST
Sbjct: 361 VVDGLAEDSKMEEANDLVELYNSNSKLKFKLKLPQNST 398

[Close]

BLAST of CSPI06G34000 vs. ExPASy TrEMBL
Match: A0A5A7UGU3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003530 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.6e-174
Identity = 322/398 (80.90%), Postives = 344/398 (86.43%), Query Frame = 0


Query: 1   MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQR 60
           MSSSS FRRLH +FNHSRSPT  FNKPNLSL S ATKKS KS  ATPLT E  LQ+L  +
Sbjct: 1   MSSSSLFRRLHGIFNHSRSPTRIFNKPNLSLPSSATKKSNKSPAATPLTAEQGLQELANK 60

Query: 61  FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG 120
           FI NSESK FRRK  TYD T+R LAVRK FSMIE+IIEAQKKY++IK+EGF  RLI LYG
Sbjct: 61  FIKNSESKLFRRKKGTYDYTIRLLAVRKSFSMIEDIIEAQKKYEDIKDEGFATRLIMLYG 120

Query: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV 180
           KAGM S ARKLFDELP L CERTVRSFNALL SCV SKEFDQVEKIFREVP+ELSIEADV
Sbjct: 121 KAGMLSHARKLFDELPALNCERTVRSFNALLSSCVNSKEFDQVEKIFREVPRELSIEADV 180

Query: 181 SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR 240
            SYNIVINAYCEMD  DKAILFFN MEKNGMEPDLVTFNTLL ALYRKGQF DGES+WA 
Sbjct: 181 RSYNIVINAYCEMDALDKAILFFNDMEKNGMEPDLVTFNTLLAALYRKGQFSDGESIWAM 240

Query: 241 MENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 300
           ME+KNIAP+L+SYNARLRGMVL+KRIQDGIELLA+MEEKEIKPDV+ YN LI  FC+DGD
Sbjct: 241 MESKNIAPNLISYNARLRGMVLEKRIQDGIELLAEMEEKEIKPDVYSYNILIKGFCEDGD 300

Query: 301 LEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 360
           LEEAKKWY KLKESEV PNA+TY T+L LLCE+GDFD GLQLCKEAI+   VFHTAEVQR
Sbjct: 301 LEEAKKWYDKLKESEVVPNASTYATLLSLLCEQGDFDFGLQLCKEAIDNGLVFHTAEVQR 360

Query: 361 VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 399
           VVDGLAE SK EEA DLVELYNS + LKFKLKLPQNST
Sbjct: 361 VVDGLAEDSKMEEANDLVELYNSNSKLKFKLKLPQNST 398

[Close]

BLAST of CSPI06G34000 vs. ExPASy TrEMBL
Match: A0A1S3AZY0 (pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103484574 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.6e-174
Identity = 322/398 (80.90%), Postives = 344/398 (86.43%), Query Frame = 0


Query: 1   MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQR 60
           MSSSS FRRLH +FNHSRSPT  FNKPNLSL S ATKKS KS  ATPLT E  LQ+L  +
Sbjct: 1   MSSSSLFRRLHGIFNHSRSPTRIFNKPNLSLPSSATKKSNKSPAATPLTAEQGLQELANK 60

Query: 61  FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG 120
           FI NSESK FRRK  TYD T+R LAVRK FSMIE+IIEAQKKY++IK+EGF  RLI LYG
Sbjct: 61  FIKNSESKLFRRKKGTYDYTIRLLAVRKSFSMIEDIIEAQKKYEDIKDEGFATRLIMLYG 120

Query: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV 180
           KAGM S ARKLFDELP L CERTVRSFNALL SCV SKEFDQVEKIFREVP+ELSIEADV
Sbjct: 121 KAGMLSHARKLFDELPALNCERTVRSFNALLSSCVNSKEFDQVEKIFREVPRELSIEADV 180

Query: 181 SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR 240
            SYNIVINAYCEMD  DKAILFFN MEKNGMEPDLVTFNTLL ALYRKGQF DGES+WA 
Sbjct: 181 RSYNIVINAYCEMDALDKAILFFNDMEKNGMEPDLVTFNTLLAALYRKGQFSDGESIWAM 240

Query: 241 MENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 300
           ME+KNIAP+L+SYNARLRGMVL+KRIQDGIELLA+MEEKEIKPDV+ YN LI  FC+DGD
Sbjct: 241 MESKNIAPNLISYNARLRGMVLEKRIQDGIELLAEMEEKEIKPDVYSYNILIKGFCEDGD 300

Query: 301 LEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 360
           LEEAKKWY KLKESEV PNA+TY T+L LLCE+GDFD GLQLCKEAI+   VFHTAEVQR
Sbjct: 301 LEEAKKWYDKLKESEVVPNASTYATLLSLLCEQGDFDFGLQLCKEAIDNGLVFHTAEVQR 360

Query: 361 VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 399
           VVDGLAE SK EEA DLVELYNS + LKFKLKLPQNST
Sbjct: 361 VVDGLAEDSKMEEANDLVELYNSNSKLKFKLKLPQNST 398

[Close]

BLAST of CSPI06G34000 vs. ExPASy TrEMBL
Match: A0A5A7UC35 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006900 PE=4 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 2.2e-171
Identity = 318/399 (79.70%), Postives = 342/399 (85.71%), Query Frame = 0


Query: 1   MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDE-NRLQKLVQ 60
           M SSS  RRLH +FNHSRSPTP FNKPN S  S ATKK  KS+ ATPLT E  R Q LV 
Sbjct: 1   MFSSSLSRRLHGIFNHSRSPTPRFNKPNPSPPSSATKKCNKSTAATPLTSEQRRFQNLVD 60

Query: 61  RFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLY 120
           RFI NSESK+FR+    YD TVR LAVRK FSMIE+IIEAQKKY+EIKEEGF  RLI+LY
Sbjct: 61  RFIKNSESKRFRQNKGKYDYTVRVLAVRKNFSMIEDIIEAQKKYEEIKEEGFATRLIKLY 120

Query: 121 GKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEAD 180
           GKAGM S ARKLFDELP L CERT +SFNALL SCVK KEFDQV+KIFREV QE+SI+AD
Sbjct: 121 GKAGMISHARKLFDELPALNCERTAQSFNALLASCVKCKEFDQVDKIFREVQQEVSIKAD 180

Query: 181 VSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWA 240
           V SYNIVINAYCEMD  DKAILFFN MEKNGMEP+LVTFNTLLTALYRKGQFLDGES+WA
Sbjct: 181 VISYNIVINAYCEMDALDKAILFFNDMEKNGMEPNLVTFNTLLTALYRKGQFLDGESIWA 240

Query: 241 RMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDG 300
            MENKNIAPDL+SYNARLRGM+L+KRI+DGIELLA+ME+KEIKPDVH YN LI  FC DG
Sbjct: 241 LMENKNIAPDLISYNARLRGMILEKRIRDGIELLAEMEKKEIKPDVHSYNILIKGFCVDG 300

Query: 301 DLEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQ 360
           DLEEAKK Y K KESEV PNATTY+T+LPLLCE+GDFD GLQLCKEAI+   VFHTAEVQ
Sbjct: 301 DLEEAKKCYVKFKESEVVPNATTYKTLLPLLCEQGDFDFGLQLCKEAIDNGLVFHTAEVQ 360

Query: 361 RVVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 399
           RVVDGLAEVSK EEAK+LVELYNS N LKFKLKLPQNST
Sbjct: 361 RVVDGLAEVSKMEEAKELVELYNSNNYLKFKLKLPQNST 399

[Close]

BLAST of CSPI06G34000 vs. NCBI nr
Match: XP_031742915.1 (pentatricopeptide repeat-containing protein At3g13160, mitochondrial [Cucumis sativus] >KAE8647677.1 hypothetical protein Csa_002917 [Cucumis sativus])

HSP 1 Score: 778.1 bits (2008), Expect = 3.7e-221
Identity = 395/398 (99.25%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQR 60
           MSSSSPFRRLHCLFNHSRSP PAFNKPNLSLSSLATKKSKKS TATPLTDENRLQKLVQR
Sbjct: 1   MSSSSPFRRLHCLFNHSRSPAPAFNKPNLSLSSLATKKSKKSPTATPLTDENRLQKLVQR 60

Query: 61  FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG 120
           FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG
Sbjct: 61  FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG 120

Query: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV 180
           KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV
Sbjct: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV 180

Query: 181 SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR 240
           SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR
Sbjct: 181 SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR 240

Query: 241 MENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 300
           MENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD
Sbjct: 241 MENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 300

Query: 301 LEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 360
           LEEAKKWYYKLKESEVDPNATTYRT+LPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR
Sbjct: 301 LEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 360

Query: 361 VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 399
           VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST
Sbjct: 361 VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 398

[Close]

BLAST of CSPI06G34000 vs. NCBI nr
Match: XP_031742914.1 (pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like [Cucumis sativus] >KAE8647676.1 hypothetical protein Csa_003894 [Cucumis sativus])

HSP 1 Score: 634.0 bits (1634), Expect = 8.6e-178
Identity = 324/398 (81.41%), Postives = 353/398 (88.69%), Query Frame = 0


Query: 1   MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQR 60
           M SSS  RRLH +FNHSRSPT  FNK N SL S AT+K  KS+ ATPLT E  LQ +V +
Sbjct: 1   MFSSSLSRRLHGIFNHSRSPTSRFNKSNPSLPSSATQKCNKSTAATPLTAEEHLQNIVDK 60

Query: 61  FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG 120
           FI N+ES++FR +  TYDSTVR LAVRKKFS+IE+IIEAQKKY++IK EGF  RLI+LYG
Sbjct: 61  FIKNTESQRFRHQKGTYDSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFATRLIKLYG 120

Query: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV 180
           KAGMFS ARKLFDELPEL CERTV+SFN+LL SCVKSKE DQVEKIFREVPQE+SI+ADV
Sbjct: 121 KAGMFSHARKLFDELPELNCERTVKSFNSLLASCVKSKELDQVEKIFREVPQEVSIKADV 180

Query: 181 SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR 240
            SYNIVINA+CEMD  DKAILFF+ MEKNGMEP+LVTFNTLLTALYRKGQF DGE +WA 
Sbjct: 181 ISYNIVINAFCEMDALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWAT 240

Query: 241 MENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 300
           MENKNIAPDLVSYNARLRGMVL+KRIQDGIELLAKMEEKEIKPDV+ YN LI  FC+DGD
Sbjct: 241 MENKNIAPDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGD 300

Query: 301 LEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 360
           LEEAKKWYYKLKESEVDP ATTYR +LPLLCE+GDFDSGLQLCKEAI+K FVFHTAEVQR
Sbjct: 301 LEEAKKWYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQR 360

Query: 361 VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 399
           VV+GLAEVSK EEAKDLVELYNSKNNLKFKLKLPQNST
Sbjct: 361 VVNGLAEVSKIEEAKDLVELYNSKNNLKFKLKLPQNST 398

[Close]

BLAST of CSPI06G34000 vs. NCBI nr
Match: TYK13084.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 623.6 bits (1607), Expect = 1.2e-174
Identity = 323/398 (81.16%), Postives = 344/398 (86.43%), Query Frame = 0


Query: 1   MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQR 60
           MSSSS FRRLH +FNHSRSPT  FNKPNLSL S ATKKS KS  ATPLT E  LQ+L  +
Sbjct: 1   MSSSSLFRRLHGIFNHSRSPTRIFNKPNLSLPSSATKKSNKSPAATPLTAEQGLQELANK 60

Query: 61  FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG 120
           FI NSESK FRRK  TYD T+R LAVRK FSMIE+IIEAQKKY++IK+EGF  RLI LYG
Sbjct: 61  FIKNSESKLFRRKKGTYDYTIRLLAVRKSFSMIEDIIEAQKKYEDIKDEGFATRLIMLYG 120

Query: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV 180
           KAGM S ARKLFDELP L CERTVRSFNALL SCV SKEFDQVEKIFREVP+ELSIEADV
Sbjct: 121 KAGMLSHARKLFDELPALNCERTVRSFNALLSSCVNSKEFDQVEKIFREVPRELSIEADV 180

Query: 181 SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR 240
            SYNIVINAYCEMD  DKAILFFN MEKNGMEPDLVTFNTLL ALYRKGQF DGESMWA 
Sbjct: 181 RSYNIVINAYCEMDALDKAILFFNDMEKNGMEPDLVTFNTLLAALYRKGQFSDGESMWAM 240

Query: 241 MENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 300
           ME+KNIAP+L+SYNARLRGMVL+KRIQDGIELLA+MEEKEIKPDV+ YN LI  FC+DGD
Sbjct: 241 MESKNIAPNLISYNARLRGMVLEKRIQDGIELLAEMEEKEIKPDVYSYNILIKGFCEDGD 300

Query: 301 LEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 360
           LEEAKKWY KLKESEV PNA+TY T+L LLCE+GDFD GLQLCKEAI+   VFHTAEVQR
Sbjct: 301 LEEAKKWYDKLKESEVVPNASTYATLLSLLCEQGDFDFGLQLCKEAIDNGLVFHTAEVQR 360

Query: 361 VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 399
           VVDGLAE SK EEA DLVELYNS + LKFKLKLPQNST
Sbjct: 361 VVDGLAEDSKMEEANDLVELYNSNSKLKFKLKLPQNST 398

[Close]

BLAST of CSPI06G34000 vs. NCBI nr
Match: XP_008439937.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like [Cucumis melo] >KAA0052739.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 622.1 bits (1603), Expect = 3.4e-174
Identity = 322/398 (80.90%), Postives = 344/398 (86.43%), Query Frame = 0


Query: 1   MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQR 60
           MSSSS FRRLH +FNHSRSPT  FNKPNLSL S ATKKS KS  ATPLT E  LQ+L  +
Sbjct: 1   MSSSSLFRRLHGIFNHSRSPTRIFNKPNLSLPSSATKKSNKSPAATPLTAEQGLQELANK 60

Query: 61  FIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYG 120
           FI NSESK FRRK  TYD T+R LAVRK FSMIE+IIEAQKKY++IK+EGF  RLI LYG
Sbjct: 61  FIKNSESKLFRRKKGTYDYTIRLLAVRKSFSMIEDIIEAQKKYEDIKDEGFATRLIMLYG 120

Query: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADV 180
           KAGM S ARKLFDELP L CERTVRSFNALL SCV SKEFDQVEKIFREVP+ELSIEADV
Sbjct: 121 KAGMLSHARKLFDELPALNCERTVRSFNALLSSCVNSKEFDQVEKIFREVPRELSIEADV 180

Query: 181 SSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR 240
            SYNIVINAYCEMD  DKAILFFN MEKNGMEPDLVTFNTLL ALYRKGQF DGES+WA 
Sbjct: 181 RSYNIVINAYCEMDALDKAILFFNDMEKNGMEPDLVTFNTLLAALYRKGQFSDGESIWAM 240

Query: 241 MENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGD 300
           ME+KNIAP+L+SYNARLRGMVL+KRIQDGIELLA+MEEKEIKPDV+ YN LI  FC+DGD
Sbjct: 241 MESKNIAPNLISYNARLRGMVLEKRIQDGIELLAEMEEKEIKPDVYSYNILIKGFCEDGD 300

Query: 301 LEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQR 360
           LEEAKKWY KLKESEV PNA+TY T+L LLCE+GDFD GLQLCKEAI+   VFHTAEVQR
Sbjct: 301 LEEAKKWYDKLKESEVVPNASTYATLLSLLCEQGDFDFGLQLCKEAIDNGLVFHTAEVQR 360

Query: 361 VVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 399
           VVDGLAE SK EEA DLVELYNS + LKFKLKLPQNST
Sbjct: 361 VVDGLAEDSKMEEANDLVELYNSNSKLKFKLKLPQNST 398

[Close]

BLAST of CSPI06G34000 vs. NCBI nr
Match: KAA0052740.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK13083.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 611.7 bits (1576), Expect = 4.5e-171
Identity = 318/399 (79.70%), Postives = 342/399 (85.71%), Query Frame = 0


Query: 1   MSSSSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTATPLTDE-NRLQKLVQ 60
           M SSS  RRLH +FNHSRSPTP FNKPN S  S ATKK  KS+ ATPLT E  R Q LV 
Sbjct: 1   MFSSSLSRRLHGIFNHSRSPTPRFNKPNPSPPSSATKKCNKSTAATPLTSEQRRFQNLVD 60

Query: 61  RFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLY 120
           RFI NSESK+FR+    YD TVR LAVRK FSMIE+IIEAQKKY+EIKEEGF  RLI+LY
Sbjct: 61  RFIKNSESKRFRQNKGKYDYTVRVLAVRKNFSMIEDIIEAQKKYEEIKEEGFATRLIKLY 120

Query: 121 GKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEAD 180
           GKAGM S ARKLFDELP L CERT +SFNALL SCVK KEFDQV+KIFREV QE+SI+AD
Sbjct: 121 GKAGMISHARKLFDELPALNCERTAQSFNALLASCVKCKEFDQVDKIFREVQQEVSIKAD 180

Query: 181 VSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWA 240
           V SYNIVINAYCEMD  DKAILFFN MEKNGMEP+LVTFNTLLTALYRKGQFLDGES+WA
Sbjct: 181 VISYNIVINAYCEMDALDKAILFFNDMEKNGMEPNLVTFNTLLTALYRKGQFLDGESIWA 240

Query: 241 RMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDG 300
            MENKNIAPDL+SYNARLRGM+L+KRI+DGIELLA+ME+KEIKPDVH YN LI  FC DG
Sbjct: 241 LMENKNIAPDLISYNARLRGMILEKRIRDGIELLAEMEKKEIKPDVHSYNILIKGFCVDG 300

Query: 301 DLEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQ 360
           DLEEAKK Y K KESEV PNATTY+T+LPLLCE+GDFD GLQLCKEAI+   VFHTAEVQ
Sbjct: 301 DLEEAKKCYVKFKESEVVPNATTYKTLLPLLCEQGDFDFGLQLCKEAIDNGLVFHTAEVQ 360

Query: 361 RVVDGLAEVSKTEEAKDLVELYNSKNNLKFKLKLPQNST 399
           RVVDGLAEVSK EEAK+LVELYNS N LKFKLKLPQNST
Sbjct: 361 RVVDGLAEVSKMEEAKELVELYNSNNYLKFKLKLPQNST 399

[Close]

BLAST of CSPI06G34000 vs. TAIR 10
Match: AT3G13160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 306.2 bits (783), Expect = 3.8e-83
Identity = 153/362 (42.27%), Postives = 231/362 (63.81%), Query Frame = 0


Query: 32  SSLATKKSKKSSTATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFS 91
           ++ AT    K S  T + DE   + + ++F    +++ FR+    Y+ TVR LA  KKF 
Sbjct: 29  AAAATPSPPKPSLITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFE 88

Query: 92  MIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALL 151
            +EEI+E Q KY  + +EGFV R+I LYG+ GMF  A+K+FDE+PE  C+RT  SFNALL
Sbjct: 89  WVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALL 148

Query: 152 VSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGM 211
            +CV SK+FD VE IF+E+P +LSIE DV+SYN +I   C    F +A+   + +E  G+
Sbjct: 149 NACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGL 208

Query: 212 EPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIE 271
           +PD +TFN LL   Y KG+F +GE +WARM  KN+  D+ SYNARL G+ ++ + ++ + 
Sbjct: 209 KPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVS 268

Query: 272 LLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTILPLLC 331
           L  K++  E+KPDV  +  +I  F  +G L+EA  WY +++++   P    + ++LP +C
Sbjct: 269 LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC 328

Query: 332 EKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVELYNSKNNLKFKL 391
           + GD +S  +LCKE   KR +   A +Q VVD L + SK +EA+++VEL  + + L+ KL
Sbjct: 329 KAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDYLQCKL 388

Query: 392 KL 394
           +L
Sbjct: 389 RL 390

[Close]

BLAST of CSPI06G34000 vs. TAIR 10
Match: AT3G13150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 300.1 bits (767), Expect = 2.7e-81
Identity = 157/387 (40.57%), Postives = 238/387 (61.50%), Query Frame = 0


Query: 4   SSPFRRLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSSTAT-----------PLTDEN 63
           SS + RLH +F  S   T    KP     S       K+STA+             +  +
Sbjct: 6   SSLYSRLHGIFKESSIATAKSAKPRSQTKSTKFPSKLKASTASVGDGGQSSNDAKDSKNS 65

Query: 64  RLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFV 123
           +L + V++F  + ES+ FR+ +  Y + +R L   KKFS I+E+++ QKK+D+IK E FV
Sbjct: 66  KLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFV 125

Query: 124 IRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQ 183
           IR++ LYG +GM   A KLFDE+PEL CERTV+SFNALL + V SK+ D+  K F+E+P+
Sbjct: 126 IRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPE 185

Query: 184 ELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFL 243
           +L I  D+ +YN +I A C     D  +  F  +EKNG EPDL++FNTLL   YR+  F+
Sbjct: 186 KLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFV 245

Query: 244 DGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLI 303
           +G+ +W  M++KN++P++ SYN+R+RG+  +K+  D + L+  M+ + I PDVH YN LI
Sbjct: 246 EGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI 305

Query: 304 TSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAINKRFV 363
           T++  D +LEE  K Y ++KE  + P+  TY  ++PLLC+KGD D  +++ +EAI  + +
Sbjct: 306 TAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365

Query: 364 FHTAEVQRVVDGLAEVSKTEEAKDLVE 380
                 + VV+ L    K +EA  LV+
Sbjct: 366 SRPNMYKPVVERLMGAGKIDEATQLVK 392

[Close]

BLAST of CSPI06G34000 vs. TAIR 10
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 297.4 bits (760), Expect = 1.8e-80
Identity = 151/374 (40.37%), Postives = 237/374 (63.37%), Query Frame = 0


Query: 21  TPAFNKPNLSLSSLATKKSKKSSTATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDST 80
           T A + P  SL+SL             +  E   +++V++F    ES++FR     YD T
Sbjct: 34  TAAISPPQKSLTSL-------------VNGERNPKRIVEKFKKACESERFRTNIAVYDRT 93

Query: 81  VRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKC 140
           VR L   K+   +EEI+E QKKY ++ +EGF  R+I LYGKAGMF  A+K+F+E+P   C
Sbjct: 94  VRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDC 153

Query: 141 ERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAI 200
           +R+V SFNALL +   SK+FD VE++F E+P +LSI+ D+ SYN +I A CE D   +A+
Sbjct: 154 KRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAV 213

Query: 201 LFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGM 260
              + +E  G++PD+VTFNTLL + Y KGQF  GE +WA+M  KN+A D+ +YNARL G+
Sbjct: 214 ALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGL 273

Query: 261 VLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNA 320
             + + ++ + L  +++   +KPDV  +N +I     +G ++EA+ WY ++ +    P+ 
Sbjct: 274 ANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDK 333

Query: 321 TTYRTILPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVEL 380
            T+  +LP +C+ GDF+S ++L KE  +KR++     +Q++VD L + SK EEA+++V++
Sbjct: 334 ATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKI 393

Query: 381 YNSKNNLKFKLKLP 395
             + + LK KL LP
Sbjct: 394 AKTNDFLKLKLNLP 394

[Close]

BLAST of CSPI06G34000 vs. TAIR 10
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 196.1 bits (497), Expect = 5.5e-50
Identity = 122/348 (35.06%), Postives = 191/348 (54.89%), Query Frame = 0


Query: 39  SKKSSTATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIE 98
           SK  ST     D ++  K+      +S S    R     + TVR LA  ++FS IE +IE
Sbjct: 34  SKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRY--AQELTVRRLAKCRRFSDIETLIE 93

Query: 99  AQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSK 158
           + K   +IKEE F   LIR YG+A MF+ A + F+++ +    R+  SFNALL +C+ SK
Sbjct: 94  SHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSK 153

Query: 159 EFDQVEKIFREVPQELS-IEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVT 218
            FD+V ++F E+PQ  + I  D  SY I+I +YC+    +KAI     M+  GME   + 
Sbjct: 154 NFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIA 213

Query: 219 FNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGI-ELLAKM 278
           F T+L++LY+KG+    +++W  M  K    D  +YN R+  M   K   + + EL+ +M
Sbjct: 214 FTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI--MSAQKESPERVKELIEEM 273

Query: 279 EEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDF 338
               +KPD   YN L+T++C+ G L+EAKK Y  L+ +   PNA T+RT++  LC    +
Sbjct: 274 SSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLY 333

Query: 339 DSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVELYNSK 385
           + G  + K+++    +     ++ +V GL E  K ++AK L+     K
Sbjct: 334 EQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377

[Close]

BLAST of CSPI06G34000 vs. TAIR 10
Match: AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 192.6 bits (488), Expect = 6.1e-49
Identity = 103/337 (30.56%), Postives = 183/337 (54.30%), Query Frame = 0


Query: 48  LTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIK 107
           L  E   +KL   F  N+ ++        ++ TV  LA   +   IE+++E QK   + +
Sbjct: 45  LKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGR 104

Query: 108 EEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIF 167
            EGF++R+I LYGKAGM  QA   F  +    C+R+V+SFNA L     + +   + +  
Sbjct: 105 REGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFL 164

Query: 168 REVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYR 227
            + P +  I+ D  S+NI I ++CE+   D A +    MEK+G+ PD+VT+ TL++ALY+
Sbjct: 165 HDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYK 224

Query: 228 KGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHI 287
             + + G  +W  M  K   P+L ++N R++ +V  +R  D  +LL  M + +++PD   
Sbjct: 225 HERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSIT 284

Query: 288 YNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTILPLLCEKGDFDSGLQLCKEAI 347
           YN +I  F      + A++ Y  +      PN   Y+T++  LC+ G+FD    +CK+ +
Sbjct: 285 YNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCM 344

Query: 348 NKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVELYNSK 385
            K++  +   V+ ++ GL +  + ++AK ++EL + +
Sbjct: 345 RKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381

The following BLAST results are available for this feature:

BLAST of CSPI06G34000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK57	5.4e-82	42.27	Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop...	[more]
Q9LK58	3.8e-80	40.57	Pentatricopeptide repeat-containing protein At3g13150 OS=Arabidopsis thaliana OX...	[more]
Q9LG23	2.5e-79	40.37	Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop...	[more]
Q9M065	7.8e-49	35.06	Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop...	[more]
Q8GW57	8.6e-48	30.56	Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop...	[more]

BLAST of CSPI06G34000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK06	5.2e-221	98.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516720 PE=4 SV=1	[more]
A0A5D3CPX8	5.6e-175	81.16	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7UGU3	1.6e-174	80.90	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3AZY0	1.6e-174	80.90	pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like OS=Cuc...	[more]
A0A5A7UC35	2.2e-171	79.70	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CSPI06G34000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742915.1	3.7e-221	99.25	pentatricopeptide repeat-containing protein At3g13160, mitochondrial [Cucumis sa...	[more]
XP_031742914.1	8.6e-178	81.41	pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like [Cucum...	[more]
TYK13084.1	1.2e-174	81.16	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008439937.1	3.4e-174	80.90	PREDICTED: pentatricopeptide repeat-containing protein At1g55890, mitochondrial-...	[more]
KAA0052740.1	4.5e-171	79.70	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK13083...	[more]

BLAST of CSPI06G34000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13160.1	3.8e-83	42.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G13150.1	2.7e-81	40.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G55890.1	1.8e-80	40.37	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G36680.1	5.5e-50	35.06	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80150.1	6.1e-49	30.56	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	PANTHER	PTHR46128:SF161	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 36..395
None	No IPR available	PANTHER	PTHR46128	MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1	coord: 36..395
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 119..352
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 146..170 e-value: 0.15 score: 12.4 coord: 251..280 e-value: 0.47 score: 10.8 coord: 115..140 e-value: 0.0031 score: 17.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 115..143 e-value: 2.4E-4 score: 19.1 coord: 216..249 e-value: 6.7E-6 score: 24.0 coord: 251..285 e-value: 7.9E-5 score: 20.6 coord: 182..214 e-value: 2.5E-10 score: 37.9 coord: 287..320 e-value: 7.1E-8 score: 30.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 179..226 e-value: 1.0E-14 score: 54.5 coord: 283..331 e-value: 5.3E-13 score: 49.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 284..318 score: 12.145178
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 214..248 score: 11.027125
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 249..283 score: 9.733692
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 179..213 score: 13.098811
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 230..392 e-value: 1.3E-30 score: 108.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 48..229 e-value: 3.3E-31 score: 110.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G34000.1	CSPI06G34000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding