CSPI06G33910 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G33910
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	cysteine-rich receptor-like protein kinase 29
Location	Chr6: 28030389 .. 28030607 (+)
RNA-Seq Expression	CSPI06G33910
Synteny	CSPI06G33910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTGAAAAGGCTAGCTCAAAGTTCGCAACAGGTTCACTTCGAATTTAAGAATGAAGTTTTACTGGTTGCTAAGTTGCAGCACCGGAATCTGGTTCGGCTTCTTGGCTTTTGCTTTGAGAAGAACGAAAGGCTCCTCATCTATGAGTTTTTGAGAAGAACGAAGATTATCGATTCAAAGTTATCCATCATGATCGTAAAGCTAGTAATATCTTAT

mRNA sequence

ATGGCTGTGAAAAGGCTAGCTCAAAGTTCGCAACAGGTTCACTTCGAATTTAAGAATGAAGTTTTACTGGTTGCTAAGTTGCAGCACCGGAATCTGGTTCGGCTTCTTGGCTTTTGCTTTGAGAAGAACGAAAGGCTCCTCATCTATGAGTTTTTGAGAAGAACGAAGATTATCGATTCAAAGTTATCCATCATGATCGTAAAGCTAGTAATATCTTAT

Coding sequence (CDS)

ATGGCTGTGAAAAGGCTAGCTCAAAGTTCGCAACAGGTTCACTTCGAATTTAAGAATGAAGTTTTACTGGTTGCTAAGTTGCAGCACCGGAATCTGGTTCGGCTTCTTGGCTTTTGCTTTGAGAAGAACGAAAGGCTCCTCATCTATGAGTTTTTGAGAAGAACGAAGATTATCGATTCAAAGTTATCCATCATGATCGTAAAGCTAGTAATATCTTAT

Protein sequence

MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKIIDSKLSIMIVKLVISY

Homology

[Close]

BLAST of CSPI06G33910 vs. ExPASy Swiss-Prot
Match: O65405 (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana OX=3702 GN=CRK28 PE=3 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-13
Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRL+ +S Q   EFKNE+LL+AKLQHRNLVRLLGFC E  ER+L+YEF++   +
Sbjct: 386 IAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASL 442

[Close]

BLAST of CSPI06G33910 vs. ExPASy Swiss-Prot
Match: O23082 (Putative receptor-like protein kinase At4g00960 OS=Arabidopsis thaliana OX=3702 GN=At4g00960 PE=3 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-13
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRL+  S Q   EF NEV LVAKLQHRNLVRLLGFCF+  ERLLIYEF + T +
Sbjct: 81  IAVKRLSMKSGQGDNEFVNEVSLVAKLQHRNLVRLLGFCFKGEERLLIYEFFKNTSL 137

[Close]

BLAST of CSPI06G33910 vs. ExPASy Swiss-Prot
Match: Q8GYA4 (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-12
Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFL 53
           +AVKRL++SS Q   EFKNEV+LVAKLQHRNLVRLLGFC +  ER+L+YE++
Sbjct: 373 VAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYV 424

[Close]

BLAST of CSPI06G33910 vs. ExPASy Swiss-Prot
Match: Q9T0J1 (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-12
Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRL++++QQ   EFKNE LLVAKLQHRNLV+LLG+  E  ERLL+YEFL  T +
Sbjct: 369 IAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSL 425

[Close]

BLAST of CSPI06G33910 vs. ExPASy Swiss-Prot
Match: Q8S9L6 (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-12
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRL+ +S Q   EFKNE+LL+AKLQHRNLVRL+GFC +  ERLL+YEF++   +
Sbjct: 382 IAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASL 438

[Close]

BLAST of CSPI06G33910 vs. ExPASy TrEMBL
Match: A0A6J1CLX3 (cysteine-rich receptor-like protein kinase 29 OS=Momordica charantia OX=3673 GN=LOC111012489 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-14
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFL 53
           +AVKRLA+ SQQ   EFKNEVLLVAKLQHRNLVRLLGFCFE+NERLLIYEFL
Sbjct: 357 VAVKRLARGSQQGDSEFKNEVLLVAKLQHRNLVRLLGFCFERNERLLIYEFL 408

[Close]

BLAST of CSPI06G33910 vs. ExPASy TrEMBL
Match: A0A5D3CNE7 (Cysteine-rich receptor-like protein kinase 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006810 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.5e-14
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRLA+ SQQ   EFKNEVLLVAKLQHRNLVRLLGFCFE++ERLLIYEFL  + +
Sbjct: 364 VAVKRLARGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFERSERLLIYEFLPNSSL 420

[Close]

BLAST of CSPI06G33910 vs. ExPASy TrEMBL
Match: A0A5A7UGV1 (Cysteine-rich receptor-like protein kinase 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003650 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.5e-14
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRLA+ SQQ   EFKNEVLLVAKLQHRNLVRLLGFCFE++ERLLIYEFL  + +
Sbjct: 354 VAVKRLARGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFERSERLLIYEFLPNSSL 410

[Close]

BLAST of CSPI06G33910 vs. ExPASy TrEMBL
Match: A0A0A0KHX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516610 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.5e-14
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRLA+ SQQ   EFKNEVLLVAKLQHRNLVRLLGFCFE++ERLLIYEFL  + +
Sbjct: 302 VAVKRLARGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFERSERLLIYEFLPNSSL 358

[Close]

BLAST of CSPI06G33910 vs. ExPASy TrEMBL
Match: A0A1S4DT80 (cysteine-rich receptor-like protein kinase 29 OS=Cucumis melo OX=3656 GN=LOC103485317 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.5e-14
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRLA+ SQQ   EFKNEVLLVAKLQHRNLVRLLGFCFE++ERLLIYEFL  + +
Sbjct: 350 VAVKRLARGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFERSERLLIYEFLPNSSL 406

[Close]

BLAST of CSPI06G33910 vs. NCBI nr
Match: XP_038883071.1 (cysteine-rich receptor-like protein kinase 29 [Benincasa hispida])

HSP 1 Score: 87.8 bits (216), Expect = 4.2e-14
Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRL Q SQQ   EFKNEVLLVAKLQHRN+VRLLGFCFE+NERLLIYEFL  + +
Sbjct: 354 IAVKRLTQGSQQGDLEFKNEVLLVAKLQHRNVVRLLGFCFERNERLLIYEFLSNSSL 410

[Close]

BLAST of CSPI06G33910 vs. NCBI nr
Match: XP_038883236.1 (putative receptor-like protein kinase At4g00960 [Benincasa hispida])

HSP 1 Score: 87.8 bits (216), Expect = 4.2e-14
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRL Q SQQ   EFKNEVLLVAKLQHRNLVRLLGFCFEK+ERLLIYEFL  + +
Sbjct: 353 VAVKRLTQGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFEKSERLLIYEFLPNSSL 409

[Close]

BLAST of CSPI06G33910 vs. NCBI nr
Match: XP_022142346.1 (cysteine-rich receptor-like protein kinase 29 [Momordica charantia])

HSP 1 Score: 87.4 bits (215), Expect = 5.5e-14
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFL 53
           +AVKRLA+ SQQ   EFKNEVLLVAKLQHRNLVRLLGFCFE+NERLLIYEFL
Sbjct: 357 VAVKRLARGSQQGDSEFKNEVLLVAKLQHRNLVRLLGFCFERNERLLIYEFL 408

[Close]

BLAST of CSPI06G33910 vs. NCBI nr
Match: TYK13075.1 (cysteine-rich receptor-like protein kinase 29 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 9.3e-14
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRLA+ SQQ   EFKNEVLLVAKLQHRNLVRLLGFCFE++ERLLIYEFL  + +
Sbjct: 364 VAVKRLARGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFERSERLLIYEFLPNSSL 420

[Close]

BLAST of CSPI06G33910 vs. NCBI nr
Match: KAA0052749.1 (cysteine-rich receptor-like protein kinase 29 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 9.3e-14
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRLA+ SQQ   EFKNEVLLVAKLQHRNLVRLLGFCFE++ERLLIYEFL  + +
Sbjct: 354 VAVKRLARGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFERSERLLIYEFLPNSSL 410

[Close]

BLAST of CSPI06G33910 vs. TAIR 10
Match: AT4G21400.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 28 )

HSP 1 Score: 74.3 bits (181), Expect = 4.5e-14
Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRL+ +S Q   EFKNE+LL+AKLQHRNLVRLLGFC E  ER+L+YEF++   +
Sbjct: 386 IAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASL 442

[Close]

BLAST of CSPI06G33910 vs. TAIR 10
Match: AT4G00960.1 (Protein kinase superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 4.5e-14
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRL+  S Q   EF NEV LVAKLQHRNLVRLLGFCF+  ERLLIYEF + T +
Sbjct: 81  IAVKRLSMKSGQGDNEFVNEVSLVAKLQHRNLVRLLGFCFKGEERLLIYEFFKNTSL 137

[Close]

BLAST of CSPI06G33910 vs. TAIR 10
Match: AT4G23180.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 10 )

HSP 1 Score: 73.6 bits (179), Expect = 7.6e-14
Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFL 53
           +AVKRL++SS Q   EFKNEV+LVAKLQHRNLVRLLGFC +  ER+L+YE++
Sbjct: 373 VAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYV 424

[Close]

BLAST of CSPI06G33910 vs. TAIR 10
Match: AT3G45860.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 4 )

HSP 1 Score: 73.2 bits (178), Expect = 9.9e-14
Identity = 35/52 (67.31%), Postives = 46/52 (88.46%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFL 53
           +AVKRL+++S Q   EF NEV++VAKLQHRNLVRLLGFC E++ER+L+YEF+
Sbjct: 376 VAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFV 427

[Close]

BLAST of CSPI06G33910 vs. TAIR 10
Match: AT4G21410.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 29 )

HSP 1 Score: 73.2 bits (178), Expect = 9.9e-14
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 1   MAVKRLAQSSQQVHFEFKNEVLLVAKLQHRNLVRLLGFCFEKNERLLIYEFLRRTKI 58
           +AVKRL+ +S Q   EFKNE+LL+AKLQHRNLVRL+GFC +  ERLL+YEF++   +
Sbjct: 382 IAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASL 438

The following BLAST results are available for this feature:

BLAST of CSPI06G33910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65405	6.3e-13	63.16	Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O23082	6.3e-13	68.42	Putative receptor-like protein kinase At4g00960 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8GYA4	1.1e-12	69.23	Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9T0J1	1.4e-12	64.91	Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8S9L6	1.4e-12	61.40	Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CSPI06G33910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLX3	2.6e-14	86.54	cysteine-rich receptor-like protein kinase 29 OS=Momordica charantia OX=3673 GN=...	[more]
A0A5D3CNE7	4.5e-14	77.19	Cysteine-rich receptor-like protein kinase 29 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7UGV1	4.5e-14	77.19	Cysteine-rich receptor-like protein kinase 29 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0KHX8	4.5e-14	77.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516610 PE=4 SV=1	[more]
A0A1S4DT80	4.5e-14	77.19	cysteine-rich receptor-like protein kinase 29 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of CSPI06G33910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883071.1	4.2e-14	77.19	cysteine-rich receptor-like protein kinase 29 [Benincasa hispida]	[more]
XP_038883236.1	4.2e-14	78.95	putative receptor-like protein kinase At4g00960 [Benincasa hispida]	[more]
XP_022142346.1	5.5e-14	86.54	cysteine-rich receptor-like protein kinase 29 [Momordica charantia]	[more]
TYK13075.1	9.3e-14	77.19	cysteine-rich receptor-like protein kinase 29 [Cucumis melo var. makuwa]	[more]
KAA0052749.1	9.3e-14	77.19	cysteine-rich receptor-like protein kinase 29 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI06G33910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21400.1	4.5e-14	63.16	cysteine-rich RLK (RECEPTOR-like protein kinase) 28	[more]
AT4G00960.1	4.5e-14	68.42	Protein kinase superfamily protein	[more]
AT4G23180.1	7.6e-14	69.23	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	[more]
AT3G45860.1	9.9e-14	67.31	cysteine-rich RLK (RECEPTOR-like protein kinase) 4	[more]
AT4G21410.1	9.9e-14	61.40	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	PFAM	PF07714	PK_Tyr_Ser-Thr	coord: 2..56 e-value: 1.3E-7 score: 31.2
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 1..51 e-value: 1.1E-19 score: 72.5
None	No IPR available	PANTHER	PTHR27006	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	coord: 2..53
None	No IPR available	PANTHER	PTHR27006:SF369	SUBFAMILY NOT NAMED	coord: 2..53
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G33910.1	CSPI06G33910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0018108	peptidyl-tyrosine phosphorylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004715	non-membrane spanning protein tyrosine kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004672	protein kinase activity