CSPI06G32040 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAGGTGCACTTAATGATGGTATAGATAGGATACATACCCTCTAATAGTAATACGGAGTCTTCAGTCTTCGGCTGTGTATTTAAAAAGCCTTTGGAAGAAGAAATCCAGACTGTGGAAAGGTTGAATACAACTCCTTCAAAAACCTCTCCACTTTCTTCCGACTTCATTCTAAAATGGTGAGAATAACCAAAGCCCTTCTGAAGGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAACCTCTAAGGTCATCATTATTCCTTTTCGATTCTATCATTTTCAGTCATTCTCCTCAATCTGTGGTGCATAATTTGGTTTTATTTTCTGTTTTTTCATTAGGTATTGTGCGGCCTCGAATTCTCTCATCAGCGATATGATTGGTGTTTCTTTCCCTGTAAGTATCACCTTGAATTCTGTAAAAAAAAATTGTACTCCGCTATAATTCTTCATCTCTGACCATTTTCTGTTTTCATTGTGATTTTCTTTTTCCTTACTAGCTTTCTGGTTCTTCTTTTAGATCATCTAGGGTGCTGTAGCTGGTTTGTTTTATGAAGTATTTCTCAATTTTGCTAGGTTAGGTAGTAAAAATAGTTGTAGGGATCAGCATCTAGTGTTGAAACCTTTGCTTCTTTTTTTTTTCTCTCCTGTTGGAATGCAATCAATCCATTATCTAGCACTATGAATGACCGAGCAAGCATAGGGTTCAGGGAGGTATTCGTATCATATGTTATTTAAGATTATAGACTAAAGGTTTAGAGTTAGAGATATATATAAACTCTCTAATCTATTGATGCCCCTTTATTATATGATATGAATAAACTGTTCTCTCTTTGCTCAAAGATATAAGTAGCATAATATTAGTGAACTACATGGATCTGTATGTTGATGGTTGTTATTTACGCTTTCTTGTTTTCTTTATTTGTCTGTTTTATAACACCCCTTGTTTGGGGGAGTTAGGTTATAGGACATCTGTTTGTTGTATGTTGTAATTTTGCATACTGTTGTGTTAGATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGATGAGGATACTGTTGAGATTACTCGAGAAAAATGAGCACTGTTTAGTTTGGGGGTCGAAGACAGTTTTTATTTCTTGAGCTCAATAATCAGAAGAGATGTCAACATAACGCCACAACACTTCACACTTGTATTTGTAAGTTTCCACTTTAGAATGAATTGAATGGTTTCATTTTCTCAAACTCACTGGTGTTGCCCAATAAAATAGTCAGATTAGACCACTTGTCCACAGTTCTTTCTTAGGGTGATTTGAAATTGTTATGGTGGAAACTAAACAAGAGAATATCCTCTAAAATTTTCTGTTCAAAACTTTTGGGCTTGTGCTGAACTATCTGATGGTGATTTGAAAAGTTGCTGGCTTAACCTACCTTTATTCCTTGTTTTCCGTAACATCAACTCCTTATCCTTTGGGTTTAACACAACATACCACAATCACATGTGATTTGATAATTGATAATATTTTTCTTCCATGAGGTGAGAAGAACGGGGAAACAGGCGGTGCCATAGTCGCGATAGTTATGGTTATGGCTATTATCGTTATTATTATAGTTTTCTACCTTTACCAATTTACTGTTTTTCAAATTGTATAGTGGGCACCATCTCATTGAGTTCTTGATAGTTAAATGGGGGTTGAAGTGTGAAAAACTCTTTGATGGGTTTGCATTCATGCCATCGCAAAAGGCATCAAAGTTGAGTGGCAATATTCAATTGGCTGAGATTGTTCTCAATTCGGAACCAGTCAAGGTTATGCAATACATTTATATTAATTTTGTGAAACTCTTTTTTTAGTAGAGCTTCGTAACCTGATTTAGGAGACTTCTTGTGTAAAATGACGATGTTCAAGTGTTTGGTTTAGTTGTTAATTTCATTCTTCACCCTTGTTGATGCAAGTGA GGGAGGTGCACTTAATGATGGTATAGATAGGATACATACCCTCTAATAGTAATACGGAGTCTTCAGTCTTCGGCTGTGTATTTAAAAAGCCTTTGGAAGAAGAAATCCAGACTGTGGAAAGGTTGAATACAACTCCTTCAAAAACCTCTCCACTTTCTTCCGACTTCATTCTAAAATGGTGAGAATAACCAAAGCCCTTCTGAAGGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAACCTCTAAGGTATTGTGCGGCCTCGAATTCTCTCATCAGCGATATGATTGGTGTTTCTTTCCCTGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGATGAGGATACTGTTGAGATTACTCGAGAAAAATGAGCACTGTTTAGTTTGGGGGTCGAAGACAGTTTTTATTTCTTGAGCTCAATAATCAGAAGAGATGTCAACATAACGCCACAACACTTCACACTTGTATTTGTAAGTTTCCACTTTAGAATGAATTGAATGGTTTCATTTTCTCAAACTCACTGGTGTTGCCCAATAAAATAGTCAGATTAGACCACTTGTCCACAGTTCTTTCTTAGGGTGATTTGAAATTGTTATGGTGGAAACTAAACAAGAGAATATCCTCTAAAATTTTCTGTTCAAAACTTTTGGGCTTGTGCTGAACTATCTGATGGTGATTTGAAAAGTTGCTGGCTTAACCTACCTTTATTCCTTGTTTTCCGTAACATCAACTCCTTATCCTTTGGGTTTAACACAACATACCACAATCACATGTGATTTGATAATTGATAATATTTTTCTTCCATGAGGTGAGAAGAACGGGGAAACAGGCGGTGCCATAGTCGCGATAGTTATGGTTATGGCTATTATCGTTATTATTATAGTTTTCTACCTTTACCAATTTACTGTTTTTCAAATTGTATAGTGGGCACCATCTCATTGAGTTCTTGATAGTTAAATGGGGGTTGAAGTGTGAAAAACTCTTTGATGGGTTTGCATTCATGCCATCGCAAAAGGCATCAAAGTTGAGTGGCAATATTCAATTGGCTGAGATTGTTCTCAATTCGGAACCAGTCAAGGTTATGCAATACATTTATATTAATTTTGTGAAACTCTTTTTTTAGTAGAGCTTCGTAACCTGATTTAGGAGACTTCTTGTGTAAAATGACGATGTTCAAGTGTTTGGTTTAGTTGTTAATTTCATTCTTCACCCTTGTTGATGCAAGTGA ATGGTGAGAATAACCAAAGCCCTTCTGAAGGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAACCTCTAAGGTATTGTGCGGCCTCGAATTCTCTCATCAGCGATATGATTGGTGTTTCTTTCCCTGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGA MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDMIGVSFPGRNSLFGAEGRKNN* Homology
BLAST of CSPI06G32040 vs. ExPASy Swiss-Prot
Match: Q5U1Z8 (Protein preY, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pyurf PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 2.6e-05 Identity = 21/37 (56.76%), Postives = 29/37 (78.38%), Query Frame = 0
BLAST of CSPI06G32040 vs. ExPASy Swiss-Prot
Match: Q96I23 (Protein preY, mitochondrial OS=Homo sapiens OX=9606 GN=PYURF PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 7.5e-05 Identity = 20/43 (46.51%), Postives = 31/43 (72.09%), Query Frame = 0
BLAST of CSPI06G32040 vs. ExPASy Swiss-Prot
Match: Q2T9V7 (Protein preY, mitochondrial OS=Bos taurus OX=9913 GN=PREY PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 9.8e-05 Identity = 19/37 (51.35%), Postives = 29/37 (78.38%), Query Frame = 0
BLAST of CSPI06G32040 vs. ExPASy Swiss-Prot
Match: Q9D1C3 (Protein preY, mitochondrial OS=Mus musculus OX=10090 GN=Pyurf PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.3e-04 Identity = 19/37 (51.35%), Postives = 29/37 (78.38%), Query Frame = 0
BLAST of CSPI06G32040 vs. ExPASy Swiss-Prot
Match: Q5M8Z2 (Protein preY, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pyurf PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 4.9e-04 Identity = 22/52 (42.31%), Postives = 36/52 (69.23%), Query Frame = 0
BLAST of CSPI06G32040 vs. ExPASy TrEMBL
Match: A0A0A0KHC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507170 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.3e-19 Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0
BLAST of CSPI06G32040 vs. ExPASy TrEMBL
Match: A0A5A7SJZ8 (UPF0434 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001030 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.4e-17 Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 0
BLAST of CSPI06G32040 vs. ExPASy TrEMBL
Match: A0A1S3B2Q6 (UPF0434 protein ECH_0194 OS=Cucumis melo OX=3656 GN=LOC103485154 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.4e-17 Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 0
BLAST of CSPI06G32040 vs. ExPASy TrEMBL
Match: A0A6J1BTN7 (uncharacterized protein LOC111005251 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005251 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14 Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = 0
BLAST of CSPI06G32040 vs. ExPASy TrEMBL
Match: A0A6J1GDI4 (uncharacterized protein LOC111453193 OS=Cucurbita moschata OX=3662 GN=LOC111453193 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.2e-13 Identity = 47/66 (71.21%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of CSPI06G32040 vs. NCBI nr
Match: XP_011658060.1 (uncharacterized protein LOC101219142 [Cucumis sativus] >KGN48943.1 hypothetical protein Csa_003028 [Cucumis sativus]) HSP 1 Score: 103.2 bits (256), Expect = 8.8e-19 Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0
BLAST of CSPI06G32040 vs. NCBI nr
Match: XP_008440859.1 (PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo] >KAA0025649.1 UPF0434 protein [Cucumis melo var. makuwa] >TYK12522.1 UPF0434 protein [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 2.8e-17 Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 0
BLAST of CSPI06G32040 vs. NCBI nr
Match: XP_038883681.1 (UPF0434 protein Ecaj_0131 [Benincasa hispida]) HSP 1 Score: 90.1 bits (222), Expect = 7.7e-15 Identity = 45/57 (78.95%), Postives = 51/57 (89.47%), Query Frame = 0
BLAST of CSPI06G32040 vs. NCBI nr
Match: XP_022132377.1 (uncharacterized protein LOC111005251 isoform X1 [Momordica charantia]) HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14 Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = 0
BLAST of CSPI06G32040 vs. NCBI nr
Match: KAG6603894.1 (hypothetical protein SDJN03_04503, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 85.1 bits (209), Expect = 2.5e-13 Identity = 47/66 (71.21%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of CSPI06G32040 vs. TAIR 10
Match: AT4G35905.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF343 (InterPro:IPR005651); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 4.5e-13 Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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