CSPI06G31500 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G31500
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Glutaredoxin domain-containing protein
Location	Chr6: 26791140 .. 26792888 (-)
RNA-Seq Expression	CSPI06G31500
Synteny	CSPI06G31500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCGGTTAGGTAGTGGAGGAACAAAAAAAGAGGGTGATGACCCGTCAAAAGGCCCAGTAGGCCAAATGGGCCTCATGATATATACGGAGATTTAGAGTGTCGAAGGATTGTGTGTAATTTTGGTGGACGACGACGACGACGACGACGACGACGATGATGCGGGGATTTCATTTTCAGTTGACTCTGGTTCTGGCGGTGATCACTCTCGCCGCCCTTTATCCTAGAGATGCCCTTACCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCAGAACGCCATCTACTCTAACAGGATTGCTATGTTCTCCAAATCCTACTGCCCGTATGTTCTTTTCTTCTCTTTCCCTTTTTTTAATTAGACAAACACACGCTTTATTTATATATATATTTTTTCCTTTTCCTATTCCCTGAACTATTCCGTGGCTCGTTGCGGCATGTCTGCACATTGTTATCAGTCGATCAGCAATCATTTTTTTAATGAGTTGTTTGCTGCCAATGAACCTGAAATTCTAATATTAGCGAATCCCGGCTTTTCGAGAAATGAATATAGGATGTACGAGTTATTCATTCACTTGTCTTTGACCAATTTTGGACTCGAAGAAAGTAGCTTATATCTCCATCTGAACAAATTAGTCGGCCCCATTTTGACAGAGCCAGAAAATTTTCTTTCTTGATATTGGGTTGGAATTCTTCATCTCTTTCTTGGTGGTTCCAACTGCAAACTGTTTTCTTTCCTCTCTCTCCTGGTTTTGTTATTTCATCTATAATTAAATCATGCCTTTTGTTTCTTCTAAAATGGAAAGAAAGAATCTTCGTATACAAAAACTGAAGAACTTCAAAATATGGTCCTTTAAATGTTTCTCTCTGTTCCTTTCTAATTATCGAGCGACTCATATTCTAATGTTGTTTTATTTTTCTGGAAGATATTGCTTGGGTGCCAAACGTATATTCAGCGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGGTATTTATTCTGTTTAATTTTGTTGATCGTTTCCAATATTAATGATTGTTTGAAGAAGCATTTTCATTTTTCATGACCACATAATGAGTATCTACATTTACTCAGATGATGGATCTCAAATTCAGAGTGTTCTACTAGACCTGACTGGAAAGCGGACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCTCTGATGGTGAGCTCTCTCAGCTCCTTTATTATTAAAAAAATTCTTCATGTCTTTTTCTAGTAGAGTAAATTTCTCATTTCCATCACTGTTTGGTTCGGTGTGGTTTCATACTTTTTACAGATCTGAAAGCTGCGGTTGCCAATGGTCAGTTGCAGAAACTTCTGGCTTCAACTTGATTGCCTTCTTGGAACGATGAACCACATATTTATTGAACTTAAGCTACATGAGCTGTGTAGATGAGTTTAACGTTGTGAAAACTTTTGATAATATTTGTTATTCGTTTGAACTCTGCAACAGAGAATTCTGTTGCAAATTTCGCCCTCTACTTTAATGAGAATCTGCATTTTTTCTTTTCATTATATGAAAGCCATGTTCAAAAGGTGTTTGATTTGGATATTCTATTGCTTTTGCTGTGTCTCACCAATGTTGTAGTGGCACACATATTGAAGATGAATTTTGTGCTGAAGCTTTAATTTGAAGTATTCCTATGTTAGTGATAAAATTTAGGCTATTGAATTAACGGGCAAGCTTCTGATTAAAAATTAGCCA

mRNA sequence

TGTCGGTTAGGTAGTGGAGGAACAAAAAAAGAGGGTGATGACCCGTCAAAAGGCCCAGTAGGCCAAATGGGCCTCATGATATATACGGAGATTTAGAGTGTCGAAGGATTGTGTGTAATTTTGGTGGACGACGACGACGACGACGACGACGACGATGATGCGGGGATTTCATTTTCAGTTGACTCTGGTTCTGGCGGTGATCACTCTCGCCGCCCTTTATCCTAGAGATGCCCTTACCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCAGAACGCCATCTACTCTAACAGGATTGCTATGTTCTCCAAATCCTACTGCCCATATTGCTTGGGTGCCAAACGTATATTCAGCGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGATGATGGATCTCAAATTCAGAGTGTTCTACTAGACCTGACTGGAAAGCGGACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCTCTGATGATCTGAAAGCTGCGGTTGCCAATGGTCAGTTGCAGAAACTTCTGGCTTCAACTTGATTGCCTTCTTGGAACGATGAACCACATATTTATTGAACTTAAGCTACATGAGCTGTGTAGATGAGTTTAACGTTGTGAAAACTTTTGATAATATTTGTTATTCGTTTGAACTCTGCAACAGAGAATTCTGTTGCAAATTTCGCCCTCTACTTTAATGAGAATCTGCATTTTTTCTTTTCATTATATGAAAGCCATGTTCAAAAGGTGTTTGATTTGGATATTCTATTGCTTTTGCTGTGTCTCACCAATGTTGTAGTGGCACACATATTGAAGATGAATTTTGTGCTGAAGCTTTAATTTGAAGTATTCCTATGTTAGTGATAAAATTTAGGCTATTGAATTAACGGGCAAGCTTCTGATTAAAAATTAGCCA

Coding sequence (CDS)

ATGATGCGGGGATTTCATTTTCAGTTGACTCTGGTTCTGGCGGTGATCACTCTCGCCGCCCTTTATCCTAGAGATGCCCTTACCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCAGAACGCCATCTACTCTAACAGGATTGCTATGTTCTCCAAATCCTACTGCCCATATTGCTTGGGTGCCAAACGTATATTCAGCGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGATGATGGATCTCAAATTCAGAGTGTTCTACTAGACCTGACTGGAAAGCGGACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCTCTGATGATCTGAAAGCTGCGGTTGCCAATGGTCAGTTGCAGAAACTTCTGGCTTCAACTTGA

Protein sequence

MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQLQKLLAST*

Homology

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BLAST of CSPI06G31500 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.8e-37
Identity = 77/109 (70.64%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 25  DALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDD 84
           D    A AA S SAFVQNAI SN+I +FSKSYCPYCL +KRIFS+L E+PFVVELD R+D
Sbjct: 22  DLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQRED 81

Query: 85  GSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQLQKLLAST 134
           G QIQ  LL+  G+RTVPQ+FVNGKHIGGSDDL AA+ +GQLQKLLA++
Sbjct: 82  GDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLLAAS 130

[Close]

BLAST of CSPI06G31500 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.7e-35
Identity = 76/121 (62.81%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 13  LAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYCLGAKRIFSELHE 72
           +AV  L  L   D    A A  S SAFVQNAIYSNRI +FSK+YCPY + AKRIF +L E
Sbjct: 10  IAVFLLLVLAEADP---AAATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKE 69

Query: 73  KPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQLQKLLAS 132
            P++VELDLR+DG +IQSVLLDL G+ TVPQ+FVNG+H+GGSDD   A +NGQLQKLL +
Sbjct: 70  NPYIVELDLREDGREIQSVLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKLLGN 127

Query: 133 T 134
           +
Sbjct: 130 S 127

[Close]

BLAST of CSPI06G31500 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26
Identity = 58/116 (50.00%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 15  VITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYCLGAKRIFSELHEKP 74
           V+ L AL    ++  + A++  + FV+  I S++I +FSKSYCPYC  AK +F EL + P
Sbjct: 10  VMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVP 69

Query: 75  FVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQLQKLL 131
           +VVELD R+DG  IQ+ L ++ G+RTVPQ+F+NGKH+GGSDD   A  +G+L KLL
Sbjct: 70  YVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLL 125

[Close]

BLAST of CSPI06G31500 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-25
Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 14  AVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYCLGAKRIFSELH-- 73
           A+I LAAL      + A    S S+FV++ + ++ + +FSKSYCPYC  AK +F EL   
Sbjct: 15  ALIALAALG-----SAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRRAKAVFKELELK 74

Query: 74  EKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQLQKLL 131
           ++P+VVELD R+DG +IQ  L D+ G+RTVPQ+FV+GKH+GGSDD   A  +G+L KLL
Sbjct: 75  KEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEAYESGKLAKLL 128

[Close]

BLAST of CSPI06G31500 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.7e-20
Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 44  IYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQ 103
           + SN + +FSK+YCPYC   K++  +L  K  VVELD   DGS+IQ+ L + TG+RTVP 
Sbjct: 10  VSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEWTGQRTVPN 69

Query: 104 IFVNGKHIGGSDDLKAAVANGQLQKLL 131
           +F+ GKHIGG D   A  + GQL  LL
Sbjct: 70  VFIGGKHIGGCDSTTAKHSQGQLVPLL 96

[Close]

BLAST of CSPI06G31500 vs. ExPASy TrEMBL
Match: A0A0A0KKK8 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504670 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYC 60
           MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQN IYSNRIAMFSKSYCPYC
Sbjct: 100 MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYC 159

Query: 61  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 120
           LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA
Sbjct: 160 LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 219

Query: 121 VANGQLQKLLAST 134
           VANGQLQKLLAST
Sbjct: 220 VANGQLQKLLAST 232

[Close]

BLAST of CSPI06G31500 vs. ExPASy TrEMBL
Match: A0A5A7SKA5 (Glutaredoxin-C3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001560 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 126/133 (94.74%), Postives = 128/133 (96.24%), Query Frame = 0


Query: 1   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYC 60
           MMRGFHFQLTLV+AVITLAALYPRD L GAEAATSTSAFV N IYSNRIAMFSKSYCPYC
Sbjct: 2   MMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYC 61

Query: 61  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 120
           LGAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA
Sbjct: 62  LGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 121

Query: 121 VANGQLQKLLAST 134
           VA+GQLQKLLAST
Sbjct: 122 VASGQLQKLLAST 134

[Close]

BLAST of CSPI06G31500 vs. ExPASy TrEMBL
Match: A0A1S3B2P3 (glutaredoxin-C3 OS=Cucumis melo OX=3656 GN=LOC103485100 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 126/133 (94.74%), Postives = 128/133 (96.24%), Query Frame = 0


Query: 1   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYC 60
           MMRGFHFQLTLV+AVITLAALYPRD L GAEAATSTSAFV N IYSNRIAMFSKSYCPYC
Sbjct: 2   MMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYC 61

Query: 61  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 120
           LGAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA
Sbjct: 62  LGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 121

Query: 121 VANGQLQKLLAST 134
           VA+GQLQKLLAST
Sbjct: 122 VASGQLQKLLAST 134

[Close]

BLAST of CSPI06G31500 vs. ExPASy TrEMBL
Match: A0A6J1KY27 (glutaredoxin-C3-like OS=Cucurbita maxima OX=3661 GN=LOC111497386 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 115/133 (86.47%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYC 60
           MMR   FQLTL L VITL+AL+PRD L GAEA+TSTSAFVQN I+SNRIAMFSKSYCPYC
Sbjct: 1   MMRA--FQLTLALVVITLSALHPRDGLIGAEASTSTSAFVQNVIFSNRIAMFSKSYCPYC 60

Query: 61  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 120
           +GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTG+RTVPQIFVNGKHIGG+DDLKAA
Sbjct: 61  MGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAA 120

Query: 121 VANGQLQKLLAST 134
           VA+GQLQKLLAS+
Sbjct: 121 VASGQLQKLLASS 131

[Close]

BLAST of CSPI06G31500 vs. ExPASy TrEMBL
Match: A0A6J1HE47 (glutaredoxin-C3 OS=Cucurbita moschata OX=3662 GN=LOC111463355 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.5e-55
Identity = 115/133 (86.47%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYC 60
           MMRG  FQLTL L VITL+AL PRD L GA+A+TSTSAFVQN I+SNRIAMFSKSYCPYC
Sbjct: 1   MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYC 60

Query: 61  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 120
           +GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTG+RTVPQIFVNGKHIGG+DDLKAA
Sbjct: 61  MGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAA 120

Query: 121 VANGQLQKLLAST 134
           VA+GQLQKLLAS+
Sbjct: 121 VASGQLQKLLASS 131

[Close]

BLAST of CSPI06G31500 vs. NCBI nr
Match: XP_004149976.1 (glutaredoxin-C3 [Cucumis sativus] >KAE8647600.1 hypothetical protein Csa_003338 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 2.5e-65
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYC 60
           MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQN IYSNRIAMFSKSYCPYC
Sbjct: 9   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYC 68

Query: 61  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 120
           LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA
Sbjct: 69  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 128

Query: 121 VANGQLQKLLAST 134
           VANGQLQKLLAST
Sbjct: 129 VANGQLQKLLAST 141

[Close]

BLAST of CSPI06G31500 vs. NCBI nr
Match: XP_008440783.1 (PREDICTED: glutaredoxin-C3 [Cucumis melo] >KAA0025699.1 glutaredoxin-C3 [Cucumis melo var. makuwa] >TYK12574.1 glutaredoxin-C3 [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 4.4e-62
Identity = 126/133 (94.74%), Postives = 128/133 (96.24%), Query Frame = 0


Query: 1   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYC 60
           MMRGFHFQLTLV+AVITLAALYPRD L GAEAATSTSAFV N IYSNRIAMFSKSYCPYC
Sbjct: 2   MMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYC 61

Query: 61  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 120
           LGAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA
Sbjct: 62  LGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 121

Query: 121 VANGQLQKLLAST 134
           VA+GQLQKLLAST
Sbjct: 122 VASGQLQKLLAST 134

[Close]

BLAST of CSPI06G31500 vs. NCBI nr
Match: XP_038881412.1 (glutaredoxin-C3 [Benincasa hispida])

HSP 1 Score: 233.8 bits (595), Expect = 8.7e-58
Identity = 118/133 (88.72%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYC 60
           ++RGF FQLTLV+AVITL+ L PRD LTG EAATSTSAFV N IYSNRIAMFSKSYCPYC
Sbjct: 2   VLRGFQFQLTLVVAVITLSGLSPRDGLTGVEAATSTSAFVHNVIYSNRIAMFSKSYCPYC 61

Query: 61  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 120
           LGAKR+FSELHEKP VVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA
Sbjct: 62  LGAKRMFSELHEKPLVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 121

Query: 121 VANGQLQKLLAST 134
           VA+GQLQKLLAS+
Sbjct: 122 VASGQLQKLLASS 134

[Close]

BLAST of CSPI06G31500 vs. NCBI nr
Match: XP_023518077.1 (glutaredoxin-C3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.9 bits (577), Expect = 1.1e-55
Identity = 116/133 (87.22%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYC 60
           MMRG  FQLTL L VITL+AL PRD LTGA+A+TSTSAFVQN I+SNRIAMFSKSYCPYC
Sbjct: 1   MMRG--FQLTLALVVITLSALRPRDGLTGADASTSTSAFVQNVIFSNRIAMFSKSYCPYC 60

Query: 61  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 120
           +GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTG+RTVPQIFVNGKHIGG+DDLKAA
Sbjct: 61  MGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAA 120

Query: 121 VANGQLQKLLAST 134
           VA+GQLQKLLAS+
Sbjct: 121 VASGQLQKLLASS 131

[Close]

BLAST of CSPI06G31500 vs. NCBI nr
Match: XP_023003943.1 (glutaredoxin-C3-like [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 4.0e-55
Identity = 115/133 (86.47%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYC 60
           MMR   FQLTL L VITL+AL+PRD L GAEA+TSTSAFVQN I+SNRIAMFSKSYCPYC
Sbjct: 1   MMRA--FQLTLALVVITLSALHPRDGLIGAEASTSTSAFVQNVIFSNRIAMFSKSYCPYC 60

Query: 61  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 120
           +GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTG+RTVPQIFVNGKHIGG+DDLKAA
Sbjct: 61  MGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAA 120

Query: 121 VANGQLQKLLAST 134
           VA+GQLQKLLAS+
Sbjct: 121 VASGQLQKLLASS 131

[Close]

BLAST of CSPI06G31500 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.3e-38
Identity = 77/109 (70.64%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 25  DALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDD 84
           D    A AA S SAFVQNAI SN+I +FSKSYCPYCL +KRIFS+L E+PFVVELD R+D
Sbjct: 22  DLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQRED 81

Query: 85  GSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQLQKLLAST 134
           G QIQ  LL+  G+RTVPQ+FVNGKHIGGSDDL AA+ +GQLQKLLA++
Sbjct: 82  GDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLLAAS 130

[Close]

BLAST of CSPI06G31500 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27
Identity = 58/116 (50.00%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 15  VITLAALYPRDALTGAEAATSTSAFVQNAIYSNRIAMFSKSYCPYCLGAKRIFSELHEKP 74
           V+ L AL    ++  + A++  + FV+  I S++I +FSKSYCPYC  AK +F EL + P
Sbjct: 10  VMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVP 69

Query: 75  FVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQLQKLL 131
           +VVELD R+DG  IQ+ L ++ G+RTVPQ+F+NGKH+GGSDD   A  +G+L KLL
Sbjct: 70  YVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLL 125

[Close]

BLAST of CSPI06G31500 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 87.4 bits (215), Expect = 9.3e-18
Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 44  IYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQ 103
           + S  + +FSK+YCPYC+  K +  +L  K   VELD   DGSQIQS L + TG+RTVP 
Sbjct: 10  VNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPN 69

Query: 104 IFVNGKHIGGSDDLKAAVANGQLQKLL 131
           +F+ G HIGG D       +G+L  LL
Sbjct: 70  VFIGGNHIGGCDATSNLHKDGKLVPLL 96

[Close]

BLAST of CSPI06G31500 vs. TAIR 10
Match: AT5G40370.2 (Glutaredoxin family protein )

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-16
Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 44  IYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQ 103
           +  N   + SK+YCPYC+  K +  +L  K   VELD   DGSQIQS L + TG+RTVP 
Sbjct: 35  LIGNFSGICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPN 94

Query: 104 IFVNGKHIGGSDDLKAAVANGQLQKLL 131
           +F+ G HIGG D       +G+L  LL
Sbjct: 95  VFIGGNHIGGCDATSNLHKDGKLVPLL 121

[Close]

BLAST of CSPI06G31500 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.1e-16
Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 0


Query: 26  ALTGAEAATSTSA---------FVQNAIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFV 85
           A+T + +A S+S+          ++  +  N + ++SK++C YC   K +F  L  +P V
Sbjct: 50  AMTSSSSAASSSSSSFGSRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLV 109

Query: 86  VELD-LRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQLQKLLA 132
           VELD L   G Q+Q VL  LTG+ TVP +FV GKHIGG  D       G L+ +LA
Sbjct: 110 VELDQLGPQGPQLQKVLERLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLA 165

The following BLAST results are available for this feature:

BLAST of CSPI06G31500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVX1	1.8e-37	70.64	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
Q6H628	1.7e-35	62.81	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
Q8LFQ6	1.8e-26	50.00	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	2.0e-25	50.42	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
P55143	9.7e-20	50.57	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]

BLAST of CSPI06G31500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKK8	1.2e-65	99.25	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G50467...	[more]
A0A5A7SKA5	2.1e-62	94.74	Glutaredoxin-C3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0015...	[more]
A0A1S3B2P3	2.1e-62	94.74	glutaredoxin-C3 OS=Cucumis melo OX=3656 GN=LOC103485100 PE=3 SV=1	[more]
A0A6J1KY27	1.9e-55	86.47	glutaredoxin-C3-like OS=Cucurbita maxima OX=3661 GN=LOC111497386 PE=3 SV=1	[more]
A0A6J1HE47	2.5e-55	86.47	glutaredoxin-C3 OS=Cucurbita moschata OX=3662 GN=LOC111463355 PE=3 SV=1	[more]

BLAST of CSPI06G31500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149976.1	2.5e-65	99.25	glutaredoxin-C3 [Cucumis sativus] >KAE8647600.1 hypothetical protein Csa_003338 ...	[more]
XP_008440783.1	4.4e-62	94.74	PREDICTED: glutaredoxin-C3 [Cucumis melo] >KAA0025699.1 glutaredoxin-C3 [Cucumis...	[more]
XP_038881412.1	8.7e-58	88.72	glutaredoxin-C3 [Benincasa hispida]	[more]
XP_023518077.1	1.1e-55	87.22	glutaredoxin-C3 [Cucurbita pepo subsp. pepo]	[more]
XP_023003943.1	4.0e-55	86.47	glutaredoxin-C3-like [Cucurbita maxima]	[more]

BLAST of CSPI06G31500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77370.1	1.3e-38	70.64	Glutaredoxin family protein	[more]
AT5G20500.1	1.3e-27	50.00	Glutaredoxin family protein	[more]
AT5G40370.1	9.3e-18	47.13	Glutaredoxin family protein	[more]
AT5G40370.2	3.0e-16	45.98	Glutaredoxin family protein	[more]
AT4G28730.1	5.1e-16	38.79	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 94..107 score: 52.38 coord: 108..121 score: 47.62 coord: 49..67 score: 40.35
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 49..111 e-value: 5.8E-16 score: 58.5
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 49..130 e-value: 6.5E-29 score: 98.0
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 30..133 e-value: 5.1E-36 score: 124.7
None	No IPR available	PIRSR	PIRSR005894-2	PIRSR005894-2	coord: 36..131 e-value: 6.5E-8 score: 30.4
None	No IPR available	PANTHER	PTHR45694:SF4	GLUTAREDOXIN-C3	coord: 15..132
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 15..132
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 37..133 score: 22.46195
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 48..129 e-value: 3.72859E-44 score: 137.286
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 51..66
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 38..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G31500.1	CSPI06G31500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity