CSPI06G31450 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G31450
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	thioredoxin H-type
Location	Chr6: 26749178 .. 26750792 (-)
RNA-Seq Expression	CSPI06G31450
Synteny	CSPI06G31450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCAAGAAATCGTAAAGAAGTTCGTGGAGACAGAAACGAGCAAATGGCAGCAGCTGCAGAAGCTACAGAGGGAGTAGTAATCCGTTGTATCACTATTGATTCATGGGAGCACCAAATTCAGCAGGGCAATGGCTCTAAAAAATTGGTATGTTATAACCTTTTCAATTTCCATTATCTTTCACAATTCTTTATCTTTCCCCCCTTCAATCGCTTTGTGTTTTCGCCTTTACTTGATTTCATCCTCTGTAATATGTTTTTTCATTTCAATGTAATCGCCATTACTTGATTTGATCAATGATCATCATCCTCACCACCCTTTTGTTGTTTTTCAAAATGATATTGATATGCTCAAGAAACTTTTCCTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTTTTTGTGGTATGGTAGAAAAAGTAGTGATCAAAGTATGATATGTTTCGAATCTTTTGTGTTTCCCCTTTTTTTATTCAACAATCAATACCGTTTTTGTCTCCCACTTAATTGGCTTTCCAGTGAAAACAAATTGGATACCATATATGTATATATATTTATTATTGTATTACTACATTGATATGATTATATGAAGCTTTATCCCGATCATGTCCTTGACTAAATGTCACCACCAATCATTTTCTCACTTAGAATACAACCGATTTTCTTCATGTAGCAACGACTACCAATTATTGAGTTCTTGACATTTTAACATACAGTATACCTTGTTCATGAGTCCTACTACTGATGCAATAATCTTTATCCCGATCATGTCCTTGACTAAATGTCACCATCGATCATTTTCTCACTTAGAATACAACCGATTTTCTTCATGTAGCAAGGACTACCAATTATTGAGTTCTTGGCATTTTAACATACAGTATACCTTGTTCATGAGTCCTAATACTGATGCAGATAGTTGTGGATTTTACTGCATCATGGTGTGGTCCATGTCGGTTCATTGCACCTTTCCTAGACGAGCTTGCTAGAAAACATCCCAATGTCACATTTTTGAAGGTTGATGTGGATGAACTGGAGGTACTGTAAATTATTATTTATAAACGTCTTGCTTTTGATAATCTAAATATAGCTCAACTAATTTGTATGTCATCTGGGAAATGATGCAGTCGGTGGCTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTTATGTTTCTGAAAGAGGGAAGAATTCTGGACAAGGTAGTTGGAGCTAAGAAGGAAGAACTGCAACAGACCGTAGCGAAGCACTTGGCTACTGCTTCTGCCTGATTTTCCAACAACAAAAAATTGGGCTCTGAAGTAGAGATATATATATATATATAAAAACTTTATTAGTCTGGAAAAGCTATAATTTTCTTCTATACTGGATTATCAACTTCTATCCGCTCGTTTTGTTGCTAGAACATGGTATATTCTCCCTTCTGAAGTGGTTTATATTGTCTTTTCTTCTTTCTTTTGAGTTTGAAAAACAATGTTATTGTCGCATTAGTATAATTGGGATTTGGGAATCTGATATTCAATTTGCTCCATAAGGAAAAGAAATTGATTCTTTAGGAGGAAGATTTGTTTAATGTATGTAATACATAATTCTGAACTTGCACCC

mRNA sequence

GGTCAAGAAATCGTAAAGAAGTTCGTGGAGACAGAAACGAGCAAATGGCAGCAGCTGCAGAAGCTACAGAGGGAGTAGTAATCCGTTGTATCACTATTGATTCATGGGAGCACCAAATTCAGCAGGGCAATGGCTCTAAAAAATTGATAGTTGTGGATTTTACTGCATCATGGTGTGGTCCATGTCGGTTCATTGCACCTTTCCTAGACGAGCTTGCTAGAAAACATCCCAATGTCACATTTTTGAAGGTTGATGTGGATGAACTGGAGTCGGTGGCTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTTATGTTTCTGAAAGAGGGAAGAATTCTGGACAAGGTAGTTGGAGCTAAGAAGGAAGAACTGCAACAGACCGTAGCGAAGCACTTGGCTACTGCTTCTGCCTGATTTTCCAACAACAAAAAATTGGGCTCTGAAGTAGAGATATATATATATATATAAAAACTTTATTAGTCTGGAAAAGCTATAATTTTCTTCTATACTGGATTATCAACTTCTATCCGCTCGTTTTGTTGCTAGAACATGGTATATTCTCCCTTCTGAAGTGGTTTATATTGTCTTTTCTTCTTTCTTTTGAGTTTGAAAAACAATGTTATTGTCGCATTAGTATAATTGGGATTTGGGAATCTGATATTCAATTTGCTCCATAAGGAAAAGAAATTGATTCTTTAGGAGGAAGATTTGTTTAATGTATGTAATACATAATTCTGAACTTGCACCC

Coding sequence (CDS)

ATGGCAGCAGCTGCAGAAGCTACAGAGGGAGTAGTAATCCGTTGTATCACTATTGATTCATGGGAGCACCAAATTCAGCAGGGCAATGGCTCTAAAAAATTGATAGTTGTGGATTTTACTGCATCATGGTGTGGTCCATGTCGGTTCATTGCACCTTTCCTAGACGAGCTTGCTAGAAAACATCCCAATGTCACATTTTTGAAGGTTGATGTGGATGAACTGGAGTCGGTGGCTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTTATGTTTCTGAAAGAGGGAAGAATTCTGGACAAGGTAGTTGGAGCTAAGAAGGAAGAACTGCAACAGACCGTAGCGAAGCACTTGGCTACTGCTTCTGCCTGA

Protein sequence

MAAAAEATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATASA*

Homology

[Close]

BLAST of CSPI06G31450 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-47
Identity = 87/115 (75.65%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 7   ATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTF 66
           A EG VI C T+++W  Q+Q+GN +K LIVVDFTASWCGPCRFIAPFL ELA+K PNVTF
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTF 62

Query: 67  LKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATAS 122
           LKVDVDEL++VA +W VE+MPTFMFLKEG+I+DKVVGAKK+ELQQT+AKH+ATAS
Sbjct: 63  LKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMATAS 117

[Close]

BLAST of CSPI06G31450 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.0e-44
Identity = 80/110 (72.73%), Postives = 94/110 (85.45%), Query Frame = 0


Query: 9   EGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTFLK 68
           EG VI C T+++W  Q+Q+ N SK L+VVDFTASWCGPCRFIAPF  +LA+K PNV FLK
Sbjct: 5   EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK 64

Query: 69  VDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLA 119
           VD DEL+SVA DW ++AMPTFMFLKEG+ILDKVVGAKK+ELQ T+AKHLA
Sbjct: 65  VDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of CSPI06G31450 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.6e-43
Identity = 82/115 (71.30%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 7   ATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTF 66
           A EG VI   T+D+W   +Q+G   KKLIVVDFTASWCGPC+FIA F  ELA+K P VTF
Sbjct: 2   AEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTF 61

Query: 67  LKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATAS 122
           LKVDVDEL+SVA DW VEAMPTFMFLKEG+I+DKVVGAKK+ELQQT+AKH+++ S
Sbjct: 62  LKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISSTS 116

[Close]

BLAST of CSPI06G31450 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.3e-38
Identity = 70/118 (59.32%), Postives = 93/118 (78.81%), Query Frame = 0


Query: 4   AAEATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPN 63
           A  + EG V  C  ++ W    ++G  +KKL+VVDFTASWCGPCRFIAP L ++A+K P+
Sbjct: 6   ATSSEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPH 65

Query: 64  VTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATAS 122
           V FLKVDVDEL++V+ +W VEAMPTF+F+K+G+ +D+VVGAKKEELQQT+ KH A A+
Sbjct: 66  VIFLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPAT 123

[Close]

BLAST of CSPI06G31450 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-34
Identity = 64/110 (58.18%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 7   ATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTF 66
           A EG VI C T++ W  +++  N SKKLIV+DFTASWC PCRFIAP   E+A+K  NV F
Sbjct: 2   AGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVF 61

Query: 67  LKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKH 117
            K+DVDEL++VA+++ VEAMPTF+F+KEG I+D+VVGA K+E+ + + KH
Sbjct: 62  FKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of CSPI06G31450 vs. ExPASy TrEMBL
Match: A0A0A0KKK1 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504620 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.0e-63
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MAAAAEATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARK 60
           MAAAAEATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARK
Sbjct: 1   MAAAAEATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARK 60

Query: 61  HPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATA 120
           HPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATA
Sbjct: 61  HPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATA 120

Query: 121 SA 123
           SA
Sbjct: 121 SA 122

[Close]

BLAST of CSPI06G31450 vs. ExPASy TrEMBL
Match: A0A1S3B1G9 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103485095 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.0e-55
Identity = 110/123 (89.43%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MAAAAEA-TEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELAR 60
           MAAAAEA TEG VI C TIDSWEHQIQ+GN S++LIVVDFTASWCGPCRF+APFLDELA+
Sbjct: 1   MAAAAEAITEGRVIHCTTIDSWEHQIQKGNASQQLIVVDFTASWCGPCRFVAPFLDELAK 60

Query: 61  KHPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLAT 120
           K PNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRI+DKVVGAKKEELQQTV KHLAT
Sbjct: 61  KFPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVLKHLAT 120

Query: 121 ASA 123
           ASA
Sbjct: 121 ASA 123

[Close]

BLAST of CSPI06G31450 vs. ExPASy TrEMBL
Match: A0A6J1IQD5 (thioredoxin H-type OS=Cucurbita maxima OX=3661 GN=LOC111477862 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.6e-50
Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 9   EGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTFLK 68
           EG VIRC TIDSW HQIQ+GN S++LIVVDFTASWCGPCRFIAPFLDELA+K P+VTFLK
Sbjct: 5   EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 69  VDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATASA 123
           VDVD+LESVAKDWGVEAMPTFMFLKEGRI+DKVVGAKKEELQQTV KH+A  S+
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118

[Close]

BLAST of CSPI06G31450 vs. ExPASy TrEMBL
Match: A0A6J1GE02 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453323 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49
Identity = 96/114 (84.21%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 9   EGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTFLK 68
           EG VIRC TIDSW HQIQ+GN S++LIVVDFTASWCGPCRFIAPFLDELA+K P+VTFLK
Sbjct: 5   EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 69  VDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATASA 123
           VDVD+LESVAKDWGVEAMPTFMFLKEGRI+DKVVGA+KEELQQTV KH+A  S+
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGARKEELQQTVFKHMAATSS 118

[Close]

BLAST of CSPI06G31450 vs. ExPASy TrEMBL
Match: A0A6J1BTW6 (thioredoxin H-type OS=Momordica charantia OX=3673 GN=LOC111005317 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 94/116 (81.03%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 7   ATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTF 66
           A+EG VIRC T+D+W  QIQ+GNGS++LIVVDFTASWCGPCRFI PFLDELA K P+VTF
Sbjct: 3   ASEGRVIRCNTVDAWNQQIQKGNGSQELIVVDFTASWCGPCRFIGPFLDELAHKCPSVTF 62

Query: 67  LKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATASA 123
           LKVDVD+LESVAKDWGVEAMPTFMFLKEGRI+DKVVGAKKEELQQTV KH+A  ++
Sbjct: 63  LKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS 118

[Close]

BLAST of CSPI06G31450 vs. NCBI nr
Match: XP_004149979.1 (thioredoxin H-type [Cucumis sativus] >KGN48882.1 hypothetical protein Csa_004163 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 8.2e-63
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MAAAAEATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARK 60
           MAAAAEATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARK
Sbjct: 1   MAAAAEATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARK 60

Query: 61  HPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATA 120
           HPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATA
Sbjct: 61  HPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATA 120

Query: 121 SA 123
           SA
Sbjct: 121 SA 122

[Close]

BLAST of CSPI06G31450 vs. NCBI nr
Match: XP_008440779.1 (PREDICTED: thioredoxin H-type [Cucumis melo])

HSP 1 Score: 224.2 bits (570), Expect = 6.3e-55
Identity = 110/123 (89.43%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MAAAAEA-TEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELAR 60
           MAAAAEA TEG VI C TIDSWEHQIQ+GN S++LIVVDFTASWCGPCRF+APFLDELA+
Sbjct: 1   MAAAAEAITEGRVIHCTTIDSWEHQIQKGNASQQLIVVDFTASWCGPCRFVAPFLDELAK 60

Query: 61  KHPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLAT 120
           K PNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRI+DKVVGAKKEELQQTV KHLAT
Sbjct: 61  KFPNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVLKHLAT 120

Query: 121 ASA 123
           ASA
Sbjct: 121 ASA 123

[Close]

BLAST of CSPI06G31450 vs. NCBI nr
Match: KAG6603933.1 (hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034113.1 hypothetical protein SDJN02_03840, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-49
Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 9   EGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTFLK 68
           EG VIRC TIDSW HQIQ+GN S++LIVVDFTASWCGPCRFIAPFLDELA+K P+VTFLK
Sbjct: 5   EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 69  VDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATASA 123
           VDVD+LESVAKDWGVEAMPTFMFLKEGRI+DKVVGAKKEELQQTV KH+A  S+
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118

[Close]

BLAST of CSPI06G31450 vs. NCBI nr
Match: XP_022977568.1 (thioredoxin H-type [Cucurbita maxima])

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-49
Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 9   EGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTFLK 68
           EG VIRC TIDSW HQIQ+GN S++LIVVDFTASWCGPCRFIAPFLDELA+K P+VTFLK
Sbjct: 5   EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 69  VDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATASA 123
           VDVD+LESVAKDWGVEAMPTFMFLKEGRI+DKVVGAKKEELQQTV KH+A  S+
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118

[Close]

BLAST of CSPI06G31450 vs. NCBI nr
Match: XP_022950147.1 (thioredoxin H-type-like [Cucurbita moschata])

HSP 1 Score: 205.3 bits (521), Expect = 3.0e-49
Identity = 96/114 (84.21%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 9   EGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTFLK 68
           EG VIRC TIDSW HQIQ+GN S++LIVVDFTASWCGPCRFIAPFLDELA+K P+VTFLK
Sbjct: 5   EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 69  VDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATASA 123
           VDVD+LESVAKDWGVEAMPTFMFLKEGRI+DKVVGA+KEELQQTV KH+A  S+
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGARKEELQQTVFKHMAATSS 118

[Close]

BLAST of CSPI06G31450 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 178.7 bits (452), Expect = 2.8e-45
Identity = 80/110 (72.73%), Postives = 94/110 (85.45%), Query Frame = 0


Query: 9   EGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTFLK 68
           EG VI C T+++W  Q+Q+ N SK L+VVDFTASWCGPCRFIAPF  +LA+K PNV FLK
Sbjct: 5   EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK 64

Query: 69  VDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLA 119
           VD DEL+SVA DW ++AMPTFMFLKEG+ILDKVVGAKK+ELQ T+AKHLA
Sbjct: 65  VDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of CSPI06G31450 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 147.1 bits (370), Expect = 9.1e-36
Identity = 64/110 (58.18%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 7   ATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTF 66
           A EG VI C T++ W  +++  N SKKLIV+DFTASWC PCRFIAP   E+A+K  NV F
Sbjct: 2   AGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVF 61

Query: 67  LKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKH 117
            K+DVDEL++VA+++ VEAMPTF+F+KEG I+D+VVGA K+E+ + + KH
Sbjct: 62  FKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of CSPI06G31450 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 141.4 bits (355), Expect = 5.0e-34
Identity = 64/116 (55.17%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 7   ATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKHPNVTF 66
           A EG VI C T++ W  +++  N SKKLIV+DFTA+WC PCRFIAP   +LA+KH +V F
Sbjct: 2   AAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVF 61

Query: 67  LKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATASA 123
            KVDVDEL +VA+++ V+AMPTF+F+KEG I + VVGA KEE+   + KH    +A
Sbjct: 62  FKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAA 117

[Close]

BLAST of CSPI06G31450 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-33
Identity = 66/117 (56.41%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 7   ATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKH-PNVT 66
           A EG VI C T D W  Q+ +   S KLIV+DFTASWC PCR IAP  ++LA+K   +  
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 67  FLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAKHLATASA 123
           F KVDVDEL+SVAK++GVEAMPTF+F+K G ++DK+VGA KE+LQ  + KH    +A
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVTTA 119

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BLAST of CSPI06G31450 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 51/114 (44.74%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 2   AAAAEATEGVVIRCITIDSWEHQIQQGNGSKKLIVVDFTASWCGPCRFIAPFLDELARKH 61
           AA  E+    V++  +   W+    +   S KL+VVDF+ASWCGPCR I P +  +A K 
Sbjct: 17  AAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKF 76

Query: 62  PNVTFLKVDVDELESVAKDWGVEAMPTFMFLKEGRILDKVVGAKKEELQQTVAK 116
            +V F+K+DVDEL  VAK++ V AMPTF+ +K G+ +++++GAKK+EL++ V+K
Sbjct: 77  NDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

The following BLAST results are available for this feature:

BLAST of CSPI06G31450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	1.3e-47	75.65	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29448	4.0e-44	72.73	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q07090	2.6e-43	71.30	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
P29449	3.3e-38	59.32	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q39241	1.3e-34	58.18	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]

BLAST of CSPI06G31450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKK1	4.0e-63	100.00	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504620...	[more]
A0A1S3B1G9	3.0e-55	89.43	thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103485095 PE=4 SV=1	[more]
A0A6J1IQD5	6.6e-50	85.09	thioredoxin H-type OS=Cucurbita maxima OX=3661 GN=LOC111477862 PE=4 SV=1	[more]
A0A6J1GE02	1.5e-49	84.21	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453323 PE=4 SV=1	[more]
A0A6J1BTW6	1.2e-48	81.03	thioredoxin H-type OS=Momordica charantia OX=3673 GN=LOC111005317 PE=4 SV=1	[more]

BLAST of CSPI06G31450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149979.1	8.2e-63	100.00	thioredoxin H-type [Cucumis sativus] >KGN48882.1 hypothetical protein Csa_004163...	[more]
XP_008440779.1	6.3e-55	89.43	PREDICTED: thioredoxin H-type [Cucumis melo]	[more]
KAG6603933.1	1.4e-49	85.09	hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022977568.1	1.4e-49	85.09	thioredoxin H-type [Cucurbita maxima]	[more]
XP_022950147.1	3.0e-49	84.21	thioredoxin H-type-like [Cucurbita moschata]	[more]

BLAST of CSPI06G31450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	2.8e-45	72.73	thioredoxin H-type 1	[more]
AT1G45145.1	9.1e-36	58.18	thioredoxin H-type 5	[more]
AT5G42980.1	5.0e-34	55.17	thioredoxin 3	[more]
AT1G19730.1	1.5e-33	56.41	Thioredoxin superfamily protein	[more]
AT5G39950.1	1.5e-25	44.74	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 43..52 score: 65.28 coord: 82..93 score: 40.28 coord: 35..43 score: 53.21
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 2..121 e-value: 3.5E-39 score: 135.6
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 7..118
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 7..118
None	No IPR available	CDD	cd02947	TRX_family	coord: 31..114 e-value: 1.83211E-36 score: 118.044
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 15..114 e-value: 2.2E-30 score: 104.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..118 score: 15.380874
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 36..54
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 10..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G31450.1	CSPI06G31450.1	mRNA