CSPI06G31430 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G31430
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	rRNA adenine N(6)-methyltransferase
Location	Chr6: 26735992 .. 26737359 (-)
RNA-Seq Expression	CSPI06G31430
Synteny	CSPI06G31430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAAATCTGAAAACTAAAAAGGAAATAAGGAAAAAGATTATGGAGTAGATTTGTCAATTTGGGGCTACAATTACAAAGCGCCGACTGCATAGCCATCTGCCGATTCAATCGACGAGTGAAGATTCAAATGCTTCGTCCCCACAAGAATCTATGCAGCTTCATCTATGGCCTGAACCACCATCAATTCCTTCACCTTATGCGTTCAGCATCCACTTATCAACACAATCACAGAAACCATGGCGCGAATGGAAATCTTCGGAAGAAAGATGAGAACGAAGAAGCCCACTTGTATTTCTACAAGAGTAGAGGCCAGCACATTCTTACAAACCAACGAATTCTGGACTCTATAGTTCGAAAATCTGCAATACTTCCGACCGATACGGTCTTGGAGATCGGACCCGGCACCGGAAATCTGACATTGAAGCTATTGGAAGCTTCTCAAAAGGTCATAGCCGTTGAAATCGATAAAAGAATGGTCGAGGTTCTTCACAAACGCGTGGCGGAGCACCAACTTGAAGACCGCATTTGTGTAAGTTAAAATTGCTATCAACTTGTTCGATGAAATGTCTGACAGAGGATAAACTGCTGGCGGTGGGGTTTTGTAGGTCATATGTCAAGATGCTTTGAAATGTGAGTTCCCTCATTTCGACCTCGTTGTGGCCAACATCCCTTATGGTATATCTTCCCCGCTTGTGGCCAAGTTGGTATACGGGACAATTCCATTCCGGAGTGCCACGCTTCTACTTCAGAAAGAGTTTGCACGGCGGTTGTTGGCGGATCCTGGTGATTCTGAGTATAATCGTTTGGCTGTTAATGTGAAACTGGTGGCTGATGTGGAGCATGTCATGGATGTAAGCAAGAGGGACTTTGTTCCTTGTCCTAAAGTCGACTCATCTGTGGTGTTAATCCGGCCCAAGAAGGAAGTTCCAGAAGTGAACCTGGAAGAATGGCGAGCGTTCACTAGAACTTGCTTTGGCAAGAAGAATAAGACACTTGGGGCAACATTCAAGCAGAAGAGGAAGCTGATGGACCTTATGCACTCAAATTCAATGGAGGGCTTTAATTCCTTCAGGGAGACGGTCATACAGGTTCTAAAATCCGGGGACTTTGAAGATAAAAGACCGGTGAAGTTGTGTAACGAAGAATTGCTACATTTGCTAGCGTTGTTTAATCAGTCTGGAATTTATTTTCACAATAGATCAGACCTTCAAGATGCAGAAAGAAGTGTCTTGGCTGACGCCTATAGTTCAGAACAAGAGTAATTTTCCTGCTTCATTCTCAATGGTGAGGGAAGTAGCTTTTGAGAAGTAGAAACTAGTCTTCCTTTTGGCGTTTCACTGTACTTTCTTATTTATCACTTGAATTA

mRNA sequence

GGAAAAATCTGAAAACTAAAAAGGAAATAAGGAAAAAGATTATGGAGTAGATTTGTCAATTTGGGGCTACAATTACAAAGCGCCGACTGCATAGCCATCTGCCGATTCAATCGACGAGTGAAGATTCAAATGCTTCGTCCCCACAAGAATCTATGCAGCTTCATCTATGGCCTGAACCACCATCAATTCCTTCACCTTATGCGTTCAGCATCCACTTATCAACACAATCACAGAAACCATGGCGCGAATGGAAATCTTCGGAAGAAAGATGAGAACGAAGAAGCCCACTTGTATTTCTACAAGAGTAGAGGCCAGCACATTCTTACAAACCAACGAATTCTGGACTCTATAGTTCGAAAATCTGCAATACTTCCGACCGATACGGTCTTGGAGATCGGACCCGGCACCGGAAATCTGACATTGAAGCTATTGGAAGCTTCTCAAAAGGTCATAGCCGTTGAAATCGATAAAAGAATGGTCGAGGTTCTTCACAAACGCGTGGCGGAGCACCAACTTGAAGACCGCATTTGTGTCATATGTCAAGATGCTTTGAAATGTGAGTTCCCTCATTTCGACCTCGTTGTGGCCAACATCCCTTATGGTATATCTTCCCCGCTTGTGGCCAAGTTGGTATACGGGACAATTCCATTCCGGAGTGCCACGCTTCTACTTCAGAAAGAGTTTGCACGGCGGTTGTTGGCGGATCCTGGTGATTCTGAGTATAATCGTTTGGCTGTTAATGTGAAACTGGTGGCTGATGTGGAGCATGTCATGGATGTAAGCAAGAGGGACTTTGTTCCTTGTCCTAAAGTCGACTCATCTGTGGTGTTAATCCGGCCCAAGAAGGAAGTTCCAGAAGTGAACCTGGAAGAATGGCGAGCGTTCACTAGAACTTGCTTTGGCAAGAAGAATAAGACACTTGGGGCAACATTCAAGCAGAAGAGGAAGCTGATGGACCTTATGCACTCAAATTCAATGGAGGGCTTTAATTCCTTCAGGGAGACGGTCATACAGGTTCTAAAATCCGGGGACTTTGAAGATAAAAGACCGGTGAAGTTGTGTAACGAAGAATTGCTACATTTGCTAGCGTTGTTTAATCAGTCTGGAATTTATTTTCACAATAGATCAGACCTTCAAGATGCAGAAAGAAGTGTCTTGGCTGACGCCTATAGTTCAGAACAAGAGTAATTTTCCTGCTTCATTCTCAATGGTGAGGGAAGTAGCTTTTGAGAAGTAGAAACTAGTCTTCCTTTTGGCGTTTCACTGTACTTTCTTATTTATCACTTGAATTA

Coding sequence (CDS)

ATGCTTCGTCCCCACAAGAATCTATGCAGCTTCATCTATGGCCTGAACCACCATCAATTCCTTCACCTTATGCGTTCAGCATCCACTTATCAACACAATCACAGAAACCATGGCGCGAATGGAAATCTTCGGAAGAAAGATGAGAACGAAGAAGCCCACTTGTATTTCTACAAGAGTAGAGGCCAGCACATTCTTACAAACCAACGAATTCTGGACTCTATAGTTCGAAAATCTGCAATACTTCCGACCGATACGGTCTTGGAGATCGGACCCGGCACCGGAAATCTGACATTGAAGCTATTGGAAGCTTCTCAAAAGGTCATAGCCGTTGAAATCGATAAAAGAATGGTCGAGGTTCTTCACAAACGCGTGGCGGAGCACCAACTTGAAGACCGCATTTGTGTCATATGTCAAGATGCTTTGAAATGTGAGTTCCCTCATTTCGACCTCGTTGTGGCCAACATCCCTTATGGTATATCTTCCCCGCTTGTGGCCAAGTTGGTATACGGGACAATTCCATTCCGGAGTGCCACGCTTCTACTTCAGAAAGAGTTTGCACGGCGGTTGTTGGCGGATCCTGGTGATTCTGAGTATAATCGTTTGGCTGTTAATGTGAAACTGGTGGCTGATGTGGAGCATGTCATGGATGTAAGCAAGAGGGACTTTGTTCCTTGTCCTAAAGTCGACTCATCTGTGGTGTTAATCCGGCCCAAGAAGGAAGTTCCAGAAGTGAACCTGGAAGAATGGCGAGCGTTCACTAGAACTTGCTTTGGCAAGAAGAATAAGACACTTGGGGCAACATTCAAGCAGAAGAGGAAGCTGATGGACCTTATGCACTCAAATTCAATGGAGGGCTTTAATTCCTTCAGGGAGACGGTCATACAGGTTCTAAAATCCGGGGACTTTGAAGATAAAAGACCGGTGAAGTTGTGTAACGAAGAATTGCTACATTTGCTAGCGTTGTTTAATCAGTCTGGAATTTATTTTCACAATAGATCAGACCTTCAAGATGCAGAAAGAAGTGTCTTGGCTGACGCCTATAGTTCAGAACAAGAGTAA

Protein sequence

MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSRGQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVLHKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKEVPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSGDFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE*

Homology

[Close]

BLAST of CSPI06G31430 vs. ExPASy Swiss-Prot
Match: Q9FK02 (Ribosomal RNA small subunit methyltransferase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DIM1B PE=1 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 5.6e-107
Identity = 202/337 (59.94%), Postives = 256/337 (75.96%), Query Frame = 0


Query: 32  HNHRNHGANGNLRKKDENEEAHLYFYKSRGQHILTNQRILDSIVRKSAILPTDTVLEIGP 91
           H+ R  G   ++R +++ E   L+  KS+GQH+LTN RILDSIVR S I PTDTVLEIGP
Sbjct: 39  HDRRRRGYERDVRIEEKKEHDGLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGP 98

Query: 92  GTGNLTLKLLEASQKVIAVEIDKRMVEVLHKRVAEHQLEDRICVICQDALKCEFPHFDLV 151
           GTGNLT+KLLEA+Q V+AVE+DKRMVE+L KRV++H   D++ +I +D LK +FPHFDLV
Sbjct: 99  GTGNLTMKLLEAAQNVVAVELDKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLV 158

Query: 152 VANIPYGISSPLVAKLVYGTIPFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADV 211
           VANIPY ISSPLVAKLVYG+  FRSATLLLQKEF+RRLLA+PGDS++NRLAVNVKLVADV
Sbjct: 159 VANIPYNISSPLVAKLVYGSNTFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADV 218

Query: 212 EHVMDVSKRDFVPCPKVDSSVVLIRPKKEVPEVNLEEWRAFTRTCFGKKNKTLGATFKQK 271
           + VMDVSKR+FVP PKVDSSV+ I PK+ +P+VN++EW AFTRTCFGKKNKTLG+ F+QK
Sbjct: 219 KFVMDVSKREFVPPPKVDSSVIRITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQK 278

Query: 272 RKLMDLM------HSNSMEGFNS--------------------------FRETVIQVLKS 331
           +K+M+L       H +++E  N                           F+E VI++L++
Sbjct: 279 KKVMELQSLSAGRHGSNVEVMNQTGGDSDSDVEEDGKDDLLCLDTDASMFKERVIEILRT 338

Query: 332 GDFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQ 337
             FE+KRP KL + ELLHLL+LFNQ+GI+FH+ + LQ
Sbjct: 339 NGFEEKRPSKLSHRELLHLLSLFNQAGIFFHDITSLQ 375

[Close]

BLAST of CSPI06G31430 vs. ExPASy Swiss-Prot
Match: O22268 (Ribosomal RNA small subunit methyltransferase OS=Arabidopsis thaliana OX=3702 GN=DIM1A PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.0e-68
Identity = 154/337 (45.70%), Postives = 199/337 (59.05%), Query Frame = 0


Query: 44  RKKDENEEAHLYFYKSRGQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEA 103
           R    + +  + F+KS+GQHIL N  ++DSIV+K+ I  TD +LEIGPGTGNLT KLLEA
Sbjct: 16  RAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTKKLLEA 75

Query: 104 SQKVIAVEIDKRMVEVLHKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPL 163
            ++VIAVE+D RMV  L +R       +R+ VI  D LK E P FD+ VANIPY ISSPL
Sbjct: 76  GKEVIAVELDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRFDICVANIPYQISSPL 135

Query: 164 VAKLVYGTIPFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFV 223
             KL++    FR A ++ Q+EFA RL+A PGD+ Y RL+VN +L A V H++ V K +F 
Sbjct: 136 TFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVSHLLKVGKNNFR 195

Query: 224 PCPKVDSSVVLIRPKKEVPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKL--------- 283
           P PKVDSSVV I P++  P+VN +EW  F R CF +KNKTLG+ FKQK  L         
Sbjct: 196 PPPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIFKQKSVLSMLEKNFKT 255

Query: 284 --------------------MDL-------------MHSNSME---------GFNSFRET 330
                               MDL             M  + ME           + F+E 
Sbjct: 256 LQAVLASLQNNGEPALNTTSMDLGDQSMGMEDDDNEMDDDDMEMDEGEGDGGETSEFKEK 315

[Close]

BLAST of CSPI06G31430 vs. ExPASy Swiss-Prot
Match: Q54QK7 (Probable dimethyladenosine transferase OS=Dictyostelium discoideum OX=44689 GN=dimt1 PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.0e-60
Identity = 132/284 (46.48%), Postives = 177/284 (62.32%), Query Frame = 0


Query: 58  KSRGQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMV 117
           KS GQH+L N  I+D+IV KS +  TDTVLEIGPGTGNLT+KLLE  +KVIA+E+D RM 
Sbjct: 31  KSYGQHLLKNPLIIDAIVDKSQLKSTDTVLEIGPGTGNLTMKLLENCKKVIAIEVDPRMA 90

Query: 118 EVLHKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSA 177
             L KRVA       + +I  D LK + P+FD+ VAN+PY ISSPL  KL+     FR+A
Sbjct: 91  AELQKRVAASPYAQHLQIILGDFLKVDLPYFDVCVANVPYQISSPLTFKLLAHRPIFRTA 150

Query: 178 TLLLQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRP 237
            L+ QKEFA RL A PGDS Y RL+VN +L++ V H+M V K +F+P PKV+S+VV I P
Sbjct: 151 VLMFQKEFALRLGAKPGDSLYCRLSVNTQLLSKVTHLMKVGKNNFLPPPKVESAVVRIEP 210

Query: 238 KKEVPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSN-----SMEG------- 297
               P +N  EW    + CF +KNKTL   F+    +++ ++ N     ++EG       
Sbjct: 211 FNPPPPINFVEWDGLVKLCFSRKNKTLSGIFRVS-SVIETLNQNYKTYCALEGKMNTDGS 270

Query: 298 FNSFRETVIQVLKSGDFEDKRPVKLCNEELLHLLALFNQSGIYF 330
               +E +I+ L   DF D R  KL   + L LL  F+++GI+F
Sbjct: 271 DEQMKELIIKTLTDNDFLDSRSSKLDINDFLKLLNKFHETGIHF 313

[Close]

BLAST of CSPI06G31430 vs. ExPASy Swiss-Prot
Match: Q2KHT8 (Probable dimethyladenosine transferase OS=Bos taurus OX=9913 GN=DIMT1 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.8e-60
Identity = 131/285 (45.96%), Postives = 178/285 (62.46%), Query Frame = 0


Query: 54  LYFYKSRGQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEID 113
           L F    GQHIL N  I++SI+ K+A+ PTD VLE+GPGTGN+T+KLLE ++KVIA E+D
Sbjct: 28  LMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELD 87

Query: 114 KRMVEVLHKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIP 173
            R+V  LHKRV    L  ++ V+  D LK + P FD  VAN+PY ISSP V KL+     
Sbjct: 88  PRLVAELHKRVQGTPLASKLQVMVGDVLKADLPFFDACVANLPYQISSPFVFKLLLHRPF 147

Query: 174 FRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVV 233
           FR A L+ Q+EFA RL+A PGD  Y RL++N +L+A V+H+M V K +F P PKV+SSVV
Sbjct: 148 FRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVV 207

Query: 234 LIRPKKEVPEVNLEEWRAFTRTCFGKKNKTLGATFKQK--RKLMD-------LMHSNSME 293
            I PK   P +N +EW    R  F +KNKTL A FK    ++L++        +H+  + 
Sbjct: 208 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIIIP 267

Query: 294 GFNSFRETVIQVLKSGDFEDKRPVKLCNEELLHLLALFNQSGIYF 330
              S  + + Q+L S  F DKR   +  ++ + LL  FN  GI+F
Sbjct: 268 EDFSIADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHF 312

[Close]

BLAST of CSPI06G31430 vs. ExPASy Swiss-Prot
Match: Q9D0D4 (Probable dimethyladenosine transferase OS=Mus musculus OX=10090 GN=Dimt1 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.1e-60
Identity = 135/304 (44.41%), Postives = 181/304 (59.54%), Query Frame = 0


Query: 44  RKKDENEEAH-------LYFYKSRGQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNL 103
           R++D  E+         L F    GQHIL N  I++SI+ K+A+ PTD VLE+GPGTGN+
Sbjct: 11  RRRDRQEQRRELKRAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNM 70

Query: 104 TLKLLEASQKVIAVEIDKRMVEVLHKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIP 163
           T+KLLE ++KV+A E+D R+V  LHKRV    L  ++ V+  D LK + P FD  VAN+P
Sbjct: 71  TVKLLEKAKKVVACELDPRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLP 130

Query: 164 YGISSPLVAKLVYGTIPFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMD 223
           Y ISSP V KL+     FR A L+ Q+EFA RL+A PGD  Y RL++N +L+A V+H+M 
Sbjct: 131 YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMK 190

Query: 224 VSKRDFVPCPKVDSSVVLIRPKKEVPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMD 283
           V K +F P PKV+SSVV I PK   P +N +EW    R  F +KNKTL A FK    +  
Sbjct: 191 VGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSS-AVQQ 250

Query: 284 LMHSNSM-----------EGFNSFRETVIQVLKSGDFEDKRPVKLCNEELLHLLALFNQS 330
           L+  N             E F S  + + Q+L S  F DKR   +  ++ + LL  FN  
Sbjct: 251 LLEKNYRIHCSVQNTVIPEDF-SIADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAE 310

[Close]

BLAST of CSPI06G31430 vs. ExPASy TrEMBL
Match: A0A0A0KJ94 (rRNA adenine N(6)-methyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G504600 PE=3 SV=1)

HSP 1 Score: 695.3 bits (1793), Expect = 1.3e-196
Identity = 350/352 (99.43%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSR 60
           MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNH NHGANGNLRKKDENEEAHLYFYKSR
Sbjct: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHINHGANGNLRKKDENEEAHLYFYKSR 60

Query: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120
           GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL
Sbjct: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120

Query: 121 HKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180
           HKRV EHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL
Sbjct: 121 HKRVVEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180

Query: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240
           LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE
Sbjct: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240

Query: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG 300
           VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG
Sbjct: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG 300

Query: 301 DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE 353
           DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE
Sbjct: 301 DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE 352

[Close]

BLAST of CSPI06G31430 vs. ExPASy TrEMBL
Match: A0A5A7SHR6 (rRNA adenine N(6)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G002020 PE=3 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 8.4e-191
Identity = 340/352 (96.59%), Postives = 346/352 (98.30%), Query Frame = 0


Query: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSR 60
           MLRPHKNLC FIYGLNHHQFLH +RSASTYQHNHRN+G +GNL KKDENEEAHLYFYKSR
Sbjct: 1   MLRPHKNLCRFIYGLNHHQFLHCIRSASTYQHNHRNNGPHGNLPKKDENEEAHLYFYKSR 60

Query: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120
           GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL
Sbjct: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120

Query: 121 HKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180
           H+RVAEHQLEDRICVICQDALKCE PHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL
Sbjct: 121 HRRVAEHQLEDRICVICQDALKCELPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180

Query: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240
           LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE
Sbjct: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240

Query: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG 300
           VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNS EGFNSFRETVIQVLKSG
Sbjct: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSEEGFNSFRETVIQVLKSG 300

Query: 301 DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE 353
           DFEDKRPVKLCNE+LLHLLALFNQSGIYFHNRS+LQDAERSVLADAYSSEQE
Sbjct: 301 DFEDKRPVKLCNEKLLHLLALFNQSGIYFHNRSELQDAERSVLADAYSSEQE 352

[Close]

BLAST of CSPI06G31430 vs. ExPASy TrEMBL
Match: A0A1S4DT73 (rRNA adenine N(6)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103485093 PE=3 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 8.4e-191
Identity = 340/352 (96.59%), Postives = 346/352 (98.30%), Query Frame = 0


Query: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSR 60
           MLRPHKNLC FIYGLNHHQFLH +RSASTYQHNHRN+G +GNL KKDENEEAHLYFYKSR
Sbjct: 1   MLRPHKNLCRFIYGLNHHQFLHCIRSASTYQHNHRNNGPHGNLPKKDENEEAHLYFYKSR 60

Query: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120
           GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL
Sbjct: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120

Query: 121 HKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180
           H+RVAEHQLEDRICVICQDALKCE PHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL
Sbjct: 121 HRRVAEHQLEDRICVICQDALKCELPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180

Query: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240
           LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE
Sbjct: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240

Query: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG 300
           VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNS EGFNSFRETVIQVLKSG
Sbjct: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSEEGFNSFRETVIQVLKSG 300

Query: 301 DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE 353
           DFEDKRPVKLCNE+LLHLLALFNQSGIYFHNRS+LQDAERSVLADAYSSEQE
Sbjct: 301 DFEDKRPVKLCNEKLLHLLALFNQSGIYFHNRSELQDAERSVLADAYSSEQE 352

[Close]

BLAST of CSPI06G31430 vs. ExPASy TrEMBL
Match: A0A5D3CL15 (rRNA adenine N(6)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001650 PE=3 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.4e-190
Identity = 339/352 (96.31%), Postives = 346/352 (98.30%), Query Frame = 0


Query: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSR 60
           MLRPHKNLC FIYGLNHHQFLH +RSASTYQHNHRN+G +GNL KKDEN+EAHLYFYKSR
Sbjct: 1   MLRPHKNLCRFIYGLNHHQFLHCIRSASTYQHNHRNNGPHGNLPKKDENKEAHLYFYKSR 60

Query: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120
           GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL
Sbjct: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120

Query: 121 HKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180
           H+RVAEHQLEDRICVICQDALKCE PHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL
Sbjct: 121 HRRVAEHQLEDRICVICQDALKCELPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180

Query: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240
           LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE
Sbjct: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240

Query: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG 300
           VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNS EGFNSFRETVIQVLKSG
Sbjct: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSEEGFNSFRETVIQVLKSG 300

Query: 301 DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE 353
           DFEDKRPVKLCNE+LLHLLALFNQSGIYFHNRS+LQDAERSVLADAYSSEQE
Sbjct: 301 DFEDKRPVKLCNEKLLHLLALFNQSGIYFHNRSELQDAERSVLADAYSSEQE 352

[Close]

BLAST of CSPI06G31430 vs. ExPASy TrEMBL
Match: A0A6J1BU06 (rRNA adenine N(6)-methyltransferase OS=Momordica charantia OX=3673 GN=LOC111005347 PE=3 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.5e-163
Identity = 295/374 (78.88%), Postives = 327/374 (87.43%), Query Frame = 0


Query: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSR 60
           ML PHKNLC F+YGLNH+   H  RSAS+YQ+N RNHGAN N+R KD NEEA LYFYKSR
Sbjct: 1   MLSPHKNLCRFVYGLNHNHSFHRTRSASSYQYNQRNHGANENVRTKDGNEEAQLYFYKSR 60

Query: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120
           GQHILTNQRILDSIVRKSAI P+DTVLEIGPGTGNLTLKLLEASQKVIA+EIDKRMVE+L
Sbjct: 61  GQHILTNQRILDSIVRKSAIRPSDTVLEIGPGTGNLTLKLLEASQKVIAIEIDKRMVEIL 120

Query: 121 HKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180
           H+RV EH+ EDRICVIC+DALKCEFP FDLVVANIPYGISSPLVAKLVYG IPFRSATLL
Sbjct: 121 HRRVVEHKFEDRICVICKDALKCEFPRFDLVVANIPYGISSPLVAKLVYGAIPFRSATLL 180

Query: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240
           LQKEFARRLLADPGDSEYNRLAVNVKLVADVE+VMDVSKR+FVPCPKVDSSVV+IRPKKE
Sbjct: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEYVMDVSKREFVPCPKVDSSVVIIRPKKE 240

Query: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMH--------------------- 300
           VPEVNLEEWR+FTRTCFGKKN+TLGATFKQKRK+++L+H                     
Sbjct: 241 VPEVNLEEWRSFTRTCFGKKNRTLGATFKQKRKVIELIHSSKVASNSENSIGGNNEEKSS 300

Query: 301 -SNSMEGFNSFRETVIQVLKSGDFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDA 353
            S+S +GF+SF+E +I+VLKSGDFEDKRP KLCN+ELLHLLALFN++GIYFH+ ++LQDA
Sbjct: 301 SSSSEKGFDSFKERIIEVLKSGDFEDKRPAKLCNKELLHLLALFNRAGIYFHDGAELQDA 360

[Close]

BLAST of CSPI06G31430 vs. NCBI nr
Match: XP_004149981.1 (ribosomal RNA small subunit methyltransferase, mitochondrial [Cucumis sativus] >KGN48879.1 hypothetical protein Csa_004364 [Cucumis sativus])

HSP 1 Score: 695.3 bits (1793), Expect = 2.8e-196
Identity = 350/352 (99.43%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSR 60
           MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNH NHGANGNLRKKDENEEAHLYFYKSR
Sbjct: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHINHGANGNLRKKDENEEAHLYFYKSR 60

Query: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120
           GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL
Sbjct: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120

Query: 121 HKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180
           HKRV EHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL
Sbjct: 121 HKRVVEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180

Query: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240
           LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE
Sbjct: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240

Query: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG 300
           VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG
Sbjct: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG 300

Query: 301 DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE 353
           DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE
Sbjct: 301 DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE 352

[Close]

BLAST of CSPI06G31430 vs. NCBI nr
Match: XP_016899158.1 (PREDICTED: ribosomal RNA small subunit methyltransferase, mitochondrial [Cucumis melo] >KAA0025708.1 ribosomal RNA small subunit methyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 676.0 bits (1743), Expect = 1.7e-190
Identity = 340/352 (96.59%), Postives = 346/352 (98.30%), Query Frame = 0


Query: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSR 60
           MLRPHKNLC FIYGLNHHQFLH +RSASTYQHNHRN+G +GNL KKDENEEAHLYFYKSR
Sbjct: 1   MLRPHKNLCRFIYGLNHHQFLHCIRSASTYQHNHRNNGPHGNLPKKDENEEAHLYFYKSR 60

Query: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120
           GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL
Sbjct: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120

Query: 121 HKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180
           H+RVAEHQLEDRICVICQDALKCE PHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL
Sbjct: 121 HRRVAEHQLEDRICVICQDALKCELPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180

Query: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240
           LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE
Sbjct: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240

Query: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG 300
           VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNS EGFNSFRETVIQVLKSG
Sbjct: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSEEGFNSFRETVIQVLKSG 300

Query: 301 DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE 353
           DFEDKRPVKLCNE+LLHLLALFNQSGIYFHNRS+LQDAERSVLADAYSSEQE
Sbjct: 301 DFEDKRPVKLCNEKLLHLLALFNQSGIYFHNRSELQDAERSVLADAYSSEQE 352

[Close]

BLAST of CSPI06G31430 vs. NCBI nr
Match: TYK12583.1 (ribosomal RNA small subunit methyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 674.5 bits (1739), Expect = 5.1e-190
Identity = 339/352 (96.31%), Postives = 346/352 (98.30%), Query Frame = 0


Query: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSR 60
           MLRPHKNLC FIYGLNHHQFLH +RSASTYQHNHRN+G +GNL KKDEN+EAHLYFYKSR
Sbjct: 1   MLRPHKNLCRFIYGLNHHQFLHCIRSASTYQHNHRNNGPHGNLPKKDENKEAHLYFYKSR 60

Query: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120
           GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL
Sbjct: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120

Query: 121 HKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180
           H+RVAEHQLEDRICVICQDALKCE PHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL
Sbjct: 121 HRRVAEHQLEDRICVICQDALKCELPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180

Query: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240
           LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE
Sbjct: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240

Query: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG 300
           VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNS EGFNSFRETVIQVLKSG
Sbjct: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSEEGFNSFRETVIQVLKSG 300

Query: 301 DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE 353
           DFEDKRPVKLCNE+LLHLLALFNQSGIYFHNRS+LQDAERSVLADAYSSEQE
Sbjct: 301 DFEDKRPVKLCNEKLLHLLALFNQSGIYFHNRSELQDAERSVLADAYSSEQE 352

[Close]

BLAST of CSPI06G31430 vs. NCBI nr
Match: XP_038881880.1 (ribosomal RNA small subunit methyltransferase, mitochondrial [Benincasa hispida])

HSP 1 Score: 641.7 bits (1654), Expect = 3.6e-180
Identity = 322/352 (91.48%), Postives = 335/352 (95.17%), Query Frame = 0


Query: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSR 60
           MLRPHKNLC FIYGL+HHQ LH +RSASTYQHN RNHGA GN+RKKDENEEAHLYFYKSR
Sbjct: 1   MLRPHKNLCRFIYGLSHHQSLHCIRSASTYQHNQRNHGAKGNVRKKDENEEAHLYFYKSR 60

Query: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120
           GQHIL NQRILDSIVRKSAIL TDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL
Sbjct: 61  GQHILMNQRILDSIVRKSAILRTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120

Query: 121 HKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180
           H+RVAEHQ EDRICVICQDALKCEFP FDLVVANIPYGISSPLVAKLVYGTIPFRSATLL
Sbjct: 121 HRRVAEHQYEDRICVICQDALKCEFPRFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180

Query: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240
           LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVV+IRPKKE
Sbjct: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVIIRPKKE 240

Query: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMHSNSMEGFNSFRETVIQVLKSG 300
           VP+VNLEEWRAFTRTCFGKKNKTLGATFKQK+KLMDLMHSNS  G+NSF+E VIQVLKSG
Sbjct: 241 VPDVNLEEWRAFTRTCFGKKNKTLGATFKQKKKLMDLMHSNSENGYNSFKEMVIQVLKSG 300

Query: 301 DFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDAERSVLADAYSSEQE 353
           DFEDKRPVKLCN+ELLHLLALFNQ+G+YFH+ S LQDAER VLA AYSSE E
Sbjct: 301 DFEDKRPVKLCNDELLHLLALFNQAGVYFHDGSKLQDAERGVLAHAYSSELE 352

[Close]

BLAST of CSPI06G31430 vs. NCBI nr
Match: XP_022132507.1 (ribosomal RNA small subunit methyltransferase, mitochondrial [Momordica charantia])

HSP 1 Score: 585.5 bits (1508), Expect = 3.1e-163
Identity = 295/374 (78.88%), Postives = 327/374 (87.43%), Query Frame = 0


Query: 1   MLRPHKNLCSFIYGLNHHQFLHLMRSASTYQHNHRNHGANGNLRKKDENEEAHLYFYKSR 60
           ML PHKNLC F+YGLNH+   H  RSAS+YQ+N RNHGAN N+R KD NEEA LYFYKSR
Sbjct: 1   MLSPHKNLCRFVYGLNHNHSFHRTRSASSYQYNQRNHGANENVRTKDGNEEAQLYFYKSR 60

Query: 61  GQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVL 120
           GQHILTNQRILDSIVRKSAI P+DTVLEIGPGTGNLTLKLLEASQKVIA+EIDKRMVE+L
Sbjct: 61  GQHILTNQRILDSIVRKSAIRPSDTVLEIGPGTGNLTLKLLEASQKVIAIEIDKRMVEIL 120

Query: 121 HKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPLVAKLVYGTIPFRSATLL 180
           H+RV EH+ EDRICVIC+DALKCEFP FDLVVANIPYGISSPLVAKLVYG IPFRSATLL
Sbjct: 121 HRRVVEHKFEDRICVICKDALKCEFPRFDLVVANIPYGISSPLVAKLVYGAIPFRSATLL 180

Query: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKE 240
           LQKEFARRLLADPGDSEYNRLAVNVKLVADVE+VMDVSKR+FVPCPKVDSSVV+IRPKKE
Sbjct: 181 LQKEFARRLLADPGDSEYNRLAVNVKLVADVEYVMDVSKREFVPCPKVDSSVVIIRPKKE 240

Query: 241 VPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKLMDLMH--------------------- 300
           VPEVNLEEWR+FTRTCFGKKN+TLGATFKQKRK+++L+H                     
Sbjct: 241 VPEVNLEEWRSFTRTCFGKKNRTLGATFKQKRKVIELIHSSKVASNSENSIGGNNEEKSS 300

Query: 301 -SNSMEGFNSFRETVIQVLKSGDFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQDA 353
            S+S +GF+SF+E +I+VLKSGDFEDKRP KLCN+ELLHLLALFN++GIYFH+ ++LQDA
Sbjct: 301 SSSSEKGFDSFKERIIEVLKSGDFEDKRPAKLCNKELLHLLALFNRAGIYFHDGAELQDA 360

[Close]

BLAST of CSPI06G31430 vs. TAIR 10
Match: AT5G66360.2 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 389.0 bits (998), Expect = 4.0e-108
Identity = 202/337 (59.94%), Postives = 256/337 (75.96%), Query Frame = 0


Query: 32  HNHRNHGANGNLRKKDENEEAHLYFYKSRGQHILTNQRILDSIVRKSAILPTDTVLEIGP 91
           H+ R  G   ++R +++ E   L+  KS+GQH+LTN RILDSIVR S I PTDTVLEIGP
Sbjct: 39  HDRRRRGYERDVRIEEKKEHDGLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGP 98

Query: 92  GTGNLTLKLLEASQKVIAVEIDKRMVEVLHKRVAEHQLEDRICVICQDALKCEFPHFDLV 151
           GTGNLT+KLLEA+Q V+AVE+DKRMVE+L KRV++H   D++ +I +D LK +FPHFDLV
Sbjct: 99  GTGNLTMKLLEAAQNVVAVELDKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLV 158

Query: 152 VANIPYGISSPLVAKLVYGTIPFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADV 211
           VANIPY ISSPLVAKLVYG+  FRSATLLLQKEF+RRLLA+PGDS++NRLAVNVKLVADV
Sbjct: 159 VANIPYNISSPLVAKLVYGSNTFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADV 218

Query: 212 EHVMDVSKRDFVPCPKVDSSVVLIRPKKEVPEVNLEEWRAFTRTCFGKKNKTLGATFKQK 271
           + VMDVSKR+FVP PKVDSSV+ I PK+ +P+VN++EW AFTRTCFGKKNKTLG+ F+QK
Sbjct: 219 KFVMDVSKREFVPPPKVDSSVIRITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQK 278

Query: 272 RKLMDLM------HSNSMEGFNS--------------------------FRETVIQVLKS 331
           +K+M+L       H +++E  N                           F+E VI++L++
Sbjct: 279 KKVMELQSLSAGRHGSNVEVMNQTGGDSDSDVEEDGKDDLLCLDTDASMFKERVIEILRT 338

Query: 332 GDFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQ 337
             FE+KRP KL + ELLHLL+LFNQ+GI+FH+ + LQ
Sbjct: 339 NGFEEKRPSKLSHRELLHLLSLFNQAGIFFHDITSLQ 375

[Close]

BLAST of CSPI06G31430 vs. TAIR 10
Match: AT5G66360.1 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 334.0 bits (855), Expect = 1.5e-91
Identity = 180/337 (53.41%), Postives = 231/337 (68.55%), Query Frame = 0


Query: 32  HNHRNHGANGNLRKKDENEEAHLYFYKSRGQHILTNQRILDSIVRKSAILPTDTVLEIGP 91
           H+ R  G   ++R +++ E   L+  KS+GQH+LTN RILDSIVR S I PTDTVLEIGP
Sbjct: 39  HDRRRRGYERDVRIEEKKEHDGLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGP 98

Query: 92  GTGNLTLKLLEASQKVIAVEIDKRMVEVLHKRVAEHQLEDRICVICQDALKCEFPHFDLV 151
           GTGNLT+KLLEA+Q V+AVE+DKRMVE+L KRV++H   D++ +I +D LK +FPHFDLV
Sbjct: 99  GTGNLTMKLLEAAQNVVAVELDKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLV 158

Query: 152 VANIPYGISSPLVAKLVYGTIPFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADV 211
           VANIPY ISSPLVAKLVYG+  FRSATLLLQKEF+RRLLA+PGDS++NRLAVNVK     
Sbjct: 159 VANIPYNISSPLVAKLVYGSNTFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVK----- 218

Query: 212 EHVMDVSKRDFVPCPKVDSSVVLIRPKKEVPEVNLEEWRAFTRTCFGKKNKTLGATFKQK 271
                                  I PK+ +P+VN++EW AFTRTCFGKKNKTLG+ F+QK
Sbjct: 219 -----------------------ITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQK 278

Query: 272 RKLMDLM------HSNSMEGFNS--------------------------FRETVIQVLKS 331
           +K+M+L       H +++E  N                           F+E VI++L++
Sbjct: 279 KKVMELQSLSAGRHGSNVEVMNQTGGDSDSDVEEDGKDDLLCLDTDASMFKERVIEILRT 338

Query: 332 GDFEDKRPVKLCNEELLHLLALFNQSGIYFHNRSDLQ 337
             FE+KRP KL + ELLHLL+LFNQ+GI+FH+ + LQ
Sbjct: 339 NGFEEKRPSKLSHRELLHLLSLFNQAGIFFHDITSLQ 347

[Close]

BLAST of CSPI06G31430 vs. TAIR 10
Match: AT2G47420.1 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 261.9 bits (668), Expect = 7.3e-70
Identity = 154/337 (45.70%), Postives = 199/337 (59.05%), Query Frame = 0


Query: 44  RKKDENEEAHLYFYKSRGQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEA 103
           R    + +  + F+KS+GQHIL N  ++DSIV+K+ I  TD +LEIGPGTGNLT KLLEA
Sbjct: 16  RAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTKKLLEA 75

Query: 104 SQKVIAVEIDKRMVEVLHKRVAEHQLEDRICVICQDALKCEFPHFDLVVANIPYGISSPL 163
            ++VIAVE+D RMV  L +R       +R+ VI  D LK E P FD+ VANIPY ISSPL
Sbjct: 76  GKEVIAVELDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRFDICVANIPYQISSPL 135

Query: 164 VAKLVYGTIPFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFV 223
             KL++    FR A ++ Q+EFA RL+A PGD+ Y RL+VN +L A V H++ V K +F 
Sbjct: 136 TFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVSHLLKVGKNNFR 195

Query: 224 PCPKVDSSVVLIRPKKEVPEVNLEEWRAFTRTCFGKKNKTLGATFKQKRKL--------- 283
           P PKVDSSVV I P++  P+VN +EW  F R CF +KNKTLG+ FKQK  L         
Sbjct: 196 PPPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIFKQKSVLSMLEKNFKT 255

Query: 284 --------------------MDL-------------MHSNSME---------GFNSFRET 330
                               MDL             M  + ME           + F+E 
Sbjct: 256 LQAVLASLQNNGEPALNTTSMDLGDQSMGMEDDDNEMDDDDMEMDEGEGDGGETSEFKEK 315

[Close]

BLAST of CSPI06G31430 vs. TAIR 10
Match: AT1G01860.1 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 96.3 bits (238), Expect = 5.3e-20
Identity = 73/229 (31.88%), Postives = 116/229 (50.66%), Query Frame = 0


Query: 58  KSRGQHILTNQRILDSIVRKSAILPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMV 117
           KS GQH + N  I D +   + +   D VLEIGPGTG+LT  L+     V+A+E D  MV
Sbjct: 73  KSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPHMV 132

Query: 118 EVLHKRVAEHQLEDRICVICQDALKCEFPHFDL-----------------VVANIPYGIS 177
           +++ +R A     D+  V+ +D +KC      L                 VV+N+P+ IS
Sbjct: 133 DLVSERFAG---SDKFKVLQEDFVKCHIRSHMLSILETRRLSHPDSALAKVVSNLPFNIS 192

Query: 178 SPLVAKLVYGTIPFRSATLLLQKEFARRLLADPG--DSEYNRLAVNVKLVADVEHVMDVS 237
           + +V  L+     F    LLLQ E A RL+ +P    SEY  + + +   ++ E+   V 
Sbjct: 193 TDVVKLLLPMGDIFSKVVLLLQDEAALRLV-EPALRTSEYRPINILINFYSEPEYNFRVP 252

Query: 238 KRDFVPCPKVDSSVVLIRPK--KEVPEV-NLEEWRAFTRTCFGKKNKTL 265
           + +F P PKVD++VV  + K  ++ P+V + + + +   + F  K K L
Sbjct: 253 RENFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVNSAFNGKRKML 297

The following BLAST results are available for this feature:

BLAST of CSPI06G31430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK02	5.6e-107	59.94	Ribosomal RNA small subunit methyltransferase, mitochondrial OS=Arabidopsis thal...	[more]
O22268	1.0e-68	45.70	Ribosomal RNA small subunit methyltransferase OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q54QK7	1.0e-60	46.48	Probable dimethyladenosine transferase OS=Dictyostelium discoideum OX=44689 GN=d...	[more]
Q2KHT8	1.8e-60	45.96	Probable dimethyladenosine transferase OS=Bos taurus OX=9913 GN=DIMT1 PE=2 SV=1	[more]
Q9D0D4	5.1e-60	44.41	Probable dimethyladenosine transferase OS=Mus musculus OX=10090 GN=Dimt1 PE=2 SV...	[more]

BLAST of CSPI06G31430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ94	1.3e-196	99.43	rRNA adenine N(6)-methyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G504600 P...	[more]
A0A5A7SHR6	8.4e-191	96.59	rRNA adenine N(6)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S4DT73	8.4e-191	96.59	rRNA adenine N(6)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103485093 PE=3...	[more]
A0A5D3CL15	2.4e-190	96.31	rRNA adenine N(6)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1BU06	1.5e-163	78.88	rRNA adenine N(6)-methyltransferase OS=Momordica charantia OX=3673 GN=LOC1110053...	[more]

BLAST of CSPI06G31430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149981.1	2.8e-196	99.43	ribosomal RNA small subunit methyltransferase, mitochondrial [Cucumis sativus] >...	[more]
XP_016899158.1	1.7e-190	96.59	PREDICTED: ribosomal RNA small subunit methyltransferase, mitochondrial [Cucumis...	[more]
TYK12583.1	5.1e-190	96.31	ribosomal RNA small subunit methyltransferase [Cucumis melo var. makuwa]	[more]
XP_038881880.1	3.6e-180	91.48	ribosomal RNA small subunit methyltransferase, mitochondrial [Benincasa hispida]	[more]
XP_022132507.1	3.1e-163	78.88	ribosomal RNA small subunit methyltransferase, mitochondrial [Momordica charanti...	[more]

BLAST of CSPI06G31430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66360.2	4.0e-108	59.94	Ribosomal RNA adenine dimethylase family protein	[more]
AT5G66360.1	1.5e-91	53.41	Ribosomal RNA adenine dimethylase family protein	[more]
AT2G47420.1	7.3e-70	45.70	Ribosomal RNA adenine dimethylase family protein	[more]
AT1G01860.1	5.3e-20	31.88	Ribosomal RNA adenine dimethylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020598	Ribosomal RNA adenine methylase transferase, N-terminal	SMART	SM00650	rADcneu6	coord: 70..239 e-value: 3.1E-78 score: 275.9
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PFAM	PF00398	RrnaAD	coord: 58..271 e-value: 1.9E-60 score: 204.2
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PANTHER	PTHR11727	DIMETHYLADENOSINE TRANSFERASE	coord: 28..285
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PANTHER	PTHR11727	DIMETHYLADENOSINE TRANSFERASE	coord: 286..330
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PROSITE	PS51689	SAM_RNA_A_N6_MT	coord: 56..326 score: 65.634331
None	No IPR available	GENE3D	1.10.8.480		coord: 243..332 e-value: 4.1E-26 score: 93.4
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 56..241 e-value: 1.3E-63 score: 216.1
None	No IPR available	PANTHER	PTHR11727:SF12	RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE, MITOCHONDRIAL	coord: 286..330 coord: 28..285
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 85..168 e-value: 8.29789E-12 score: 59.3658
IPR011530	Ribosomal RNA adenine dimethylase	TIGRFAM	TIGR00755	TIGR00755	coord: 57..320 e-value: 3.5E-72 score: 240.7
IPR011530	Ribosomal RNA adenine dimethylase	HAMAP	MF_00607	16SrRNA_methyltr_A	coord: 54..323 score: 40.033638
IPR020596	Ribosomal RNA adenine methylase transferase, conserved site	PROSITE	PS01131	RRNA_A_DIMETH	coord: 86..113
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 54..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G31430.1	CSPI06G31430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0000154	rRNA modification
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity
molecular_function	GO:0008649	rRNA methyltransferase activity