CSPI06G30600 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G30600
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Translation initiation factor IF-2, putative isoform 1
Location	Chr6: 26265802 .. 26268983 (+)
RNA-Seq Expression	CSPI06G30600
Synteny	CSPI06G30600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTACAAGACACCTATAAAGGTAGTAACATTTTGAAATTCAAGTTAAGAAATTAGAATGAAAAGAACACCTTTAGGAGATAGTAGGAGACATGGATGATAATGGCCTTTTCCCACCGTCAGCGAGACAGCGTTATCAAGTGTTGAATAAAGAAGTTGGGCTGAATTTCATCACCTTCTGGGCTGGAGGCCCATTATAGGCCCATATATAATATCCGACCCGCGTTGTTCGCATCCCGTCAACATTGCTATTATTCAATTTCAAACCACCATCTTTCTCCCGCCCAATCTTCTTGCCCACGTCTCAACATCGGTTCTTCGGCAGAGCTCAAAAAGAGGAAGAGAGAGATTTACCGGTGTAAATTAATCCATTTTTTTCCATCTCCGGCAGCTACACTTCTTCATGTTTTAGAATCCCACTGCGAACTTCAATTAATTTCACTGTGCACTACATTAGGGTTTGAAAGTTTTTGTACAGTTGAAAATCCAGTGACGAAGTACGGATTCATCTCAGAATGCTGCAATCTGAGTAGTCCAGTAAAGCCAAGAAAGACTGCTAGCTGAGAATGGCAAGGCGAAAGGCGAAGAAAACGGTTAAGAAGTCCAGCCCTTCACCTATACTAGAAGCAAAGGATGAAGCAGCGAATGACGAAGATGGTATGTTGAAATTCGTAGTGATTTCGATCCTTTTTACTGAAGCCGGAATTTAATTGAAAGAAAATTGTTTTGTTTCTCTTCCCGACAACATAATTGTTCCGCTGTTTTCCCTTTTACTCGTGTTTAGTTGAACGGCATGCTGCTGCAATCCGTGCCATTCGGGATGTGGAGATCGGGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAGGAGCAATTGCAAACTCCTTTATTGCAATTCTTCGAAGAAAAACTTCCTAGGTTGTCTATTTCGAGAACAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAACTACGCACCAATCCAGCTGATGGAATAGATATACATGCGTCTCTCCTTCACCGCCTGTCGATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTCAATGGATTCGAATTTTCCAGTAAATCAGGTATCTGTAGATTTTGGATTTTGGAGCGCAAAATCATTTAGTAAGTGCCCCCTTATACGACGCTTCTTTGCTGCAACTCACCTTCTTTTCTCTACTGATGGCAGTGAAAACGAATCCTTTCATTGTCGAGAACCTGCAAATTCCAAACTTTGTAAGTAATATTTGCATATGATATCTTAAATCGTACAGTAGTAGAATGAGTTATATGGTGCGAGCACACAACATACGATGTAGTTTGTCTATATCTTTTGTTTCATGTTGTTGATTTGTGGAAGAACGCTACTAGAAATAAAACCGTGAACAATTTGGTATTGACTCATAGATTTGTTAACAATTCTTGATTTTAGGTTTTGGAGGAGCCCTCGGATAATTTGGTGCTCGGCATGCCAGACATACACCAAACTCCTGGGGTTTGTATCTTTATGGTTTTTGCACATCGCTTATTGCATTGGCCTTTTCATGTTAATATTCTATAGCTGTCTGTTATTGCCATTTTTTTAGGCGGTGTTTTCACTTAAATTATCTTGGCACATTGATTGTCGGGGTCTAAGGAATGGAATTACTGTAGTGATAGATGGGTGGCTGCAATCAATTATTAATGTTTTATTTTCAATAATTAACGGTGTTTTGTTTAAATATTTAAGGGTGTCTAAGCTAATTCATGTCTATAAGTAGGGATTTATTGCCTCAATCTGTCAATAAGTTTGAGTTGTGACTTCTTGGTTATAAGTTGGGATCTTGTTGCCCACCATCAGTTAAACTTTGTGGTTAATGAAGTCTAAATGTAGGGAATAAGTTCAGCACATAGTGGCCATCCCACTACCAAATATTTGAAAATCAAAGTAGAATCACATTATGATAGTTTTTTCTGTGAGGATAGTTGAGGCTAACAAGCTGACCTTAAAGAAAACATGGCCTTCATATACTCATTAGTAAATCGGAAATGAACTTTGAACCTAGTATTTGTCTTGCAATCGGATGCTATTTGAAATTTTGGAACGTTGGACTATAGTTTTGTTTTTTCTTCTCTCTTTTAATGGTTCATTTTGGATTTGAATATTTCTACTCCGAAACTTCAGTGTAAATGTTCCTATGGATATCAATACCATGATAAAAGTTCATATTTATATATGTTTTCTGCCAACCAACTAGGGGAGATAAATTAAGTTCCGAGCTAAGTTGCAAAAAAGTTATTGGGAGCCGGGAGGCAATAGTCGATCATTTCAAAAATCAATCATGACTAGATCGTAGAGGGAATGATGGAACACGGCTTCATTTCTAGTAATTAAATAATTTATTTGTTAAGACAGGGAAAATCTTGAACCCATGAAGGAAGCTGCAAAGATGAATTCTAAGTACAAAGATCGGCATGGTTCTTACTAAAAAATACATGTAAAGATTATATTTTAATAACATCTCAGGATTGTTCGAGGGATTATCCCTAACAAAACTTGCTTAAGGCTGTTTTTGTCATTTTTGCCTCTATTTAGTGTATTATACTATAACTATAAGCTAACTAGCCTTCCTTCTACAGGTGAGTAACCAACGATTATCCATTGGGATGACTCCGAAAACCCGAAGACTGCCAAAACCAGGCGAGATGCTTGTGTCCATCCATGGATCCCCCTTGGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGGTATGCTCATTTAGGTCATTTCCATTTCTAGACATGGAGTATTTTGGTGGGTTTATATAAATCGTGCTTCTACATTTTTCTAATGGGTAAATTGATATTGTGCAGAATCGGAAGAGGGTTGATTTACTGATTCAACGCGACTTGACTGCTTGTCAATAGAAGTGATACTCCAAATGCGATCATCACGACCATCGTTTTACTTTTACCTGATGTACTTTCAACCTTCTTGTCTTGTAATCTAACCTTTTGATTACTTCTTAAAAGTTACTCTCATGTGTATAACTATAAACTAGTGTGTTTTAACTCCAAGGAACGAGCATGTACAAACACGCAATTGCTCCACTAGATTATTGTTCATTGTTATTTGTTACGAAAGTTGATGTTGGATTTAA

mRNA sequence

CAATTACAAGACACCTATAAAGGTAGTAACATTTTGAAATTCAAGTTAAGAAATTAGAATGAAAAGAACACCTTTAGGAGATAGTAGGAGACATGGATGATAATGGCCTTTTCCCACCGTCAGCGAGACAGCGTTATCAAGTGTTGAATAAAGAAGTTGGGCTGAATTTCATCACCTTCTGGGCTGGAGGCCCATTATAGGCCCATATATAATATCCGACCCGCGTTGTTCGCATCCCGTCAACATTGCTATTATTCAATTTCAAACCACCATCTTTCTCCCGCCCAATCTTCTTGCCCACGTCTCAACATCGGTTCTTCGGCAGAGCTCAAAAAGAGGAAGAGAGAGATTTACCGGTGTAAATTAATCCATTTTTTTCCATCTCCGGCAGCTACACTTCTTCATGTTTTAGAATCCCACTGCGAACTTCAATTAATTTCACTGTGCACTACATTAGGGTTTGAAAGTTTTTGTACAGTTGAAAATCCAGTGACGAAGTACGGATTCATCTCAGAATGCTGCAATCTGAGTAGTCCAGTAAAGCCAAGAAAGACTGCTAGCTGAGAATGGCAAGGCGAAAGGCGAAGAAAACGGTTAAGAAGTCCAGCCCTTCACCTATACTAGAAGCAAAGGATGAAGCAGCGAATGACGAAGATGTTGAACGGCATGCTGCTGCAATCCGTGCCATTCGGGATGTGGAGATCGGGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAGGAGCAATTGCAAACTCCTTTATTGCAATTCTTCGAAGAAAAACTTCCTAGGTTGTCTATTTCGAGAACAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAACTACGCACCAATCCAGCTGATGGAATAGATATACATGCGTCTCTCCTTCACCGCCTGTCGATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTCAATGGATTCGAATTTTCCAGTAAATCAGTGAAAACGAATCCTTTCATTGTCGAGAACCTGCAAATTCCAAACTTTGTTTTGGAGGAGCCCTCGGATAATTTGGTGCTCGGCATGCCAGACATACACCAAACTCCTGGGGTGAGTAACCAACGATTATCCATTGGGATGACTCCGAAAACCCGAAGACTGCCAAAACCAGGCGAGATGCTTGTGTCCATCCATGGATCCCCCTTGGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGAATCGGAAGAGGGTTGATTTACTGATTCAACGCGACTTGACTGCTTGTCAATAGAAGTGATACTCCAAATGCGATCATCACGACCATCGTTTTACTTTTACCTGATGTACTTTCAACCTTCTTGTCTTGTAATCTAACCTTTTGATTACTTCTTAAAAGTTACTCTCATGTGTATAACTATAAACTAGTGTGTTTTAACTCCAAGGAACGAGCATGTACAAACACGCAATTGCTCCACTAGATTATTGTTCATTGTTATTTGTTACGAAAGTTGATGTTGGATTTAA

Coding sequence (CDS)

ATGGCAAGGCGAAAGGCGAAGAAAACGGTTAAGAAGTCCAGCCCTTCACCTATACTAGAAGCAAAGGATGAAGCAGCGAATGACGAAGATGTTGAACGGCATGCTGCTGCAATCCGTGCCATTCGGGATGTGGAGATCGGGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAGGAGCAATTGCAAACTCCTTTATTGCAATTCTTCGAAGAAAAACTTCCTAGGTTGTCTATTTCGAGAACAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAACTACGCACCAATCCAGCTGATGGAATAGATATACATGCGTCTCTCCTTCACCGCCTGTCGATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTCAATGGATTCGAATTTTCCAGTAAATCAGTGAAAACGAATCCTTTCATTGTCGAGAACCTGCAAATTCCAAACTTTGTTTTGGAGGAGCCCTCGGATAATTTGGTGCTCGGCATGCCAGACATACACCAAACTCCTGGGGTGAGTAACCAACGATTATCCATTGGGATGACTCCGAAAACCCGAAGACTGCCAAAACCAGGCGAGATGCTTGTGTCCATCCATGGATCCCCCTTGGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGAATCGGAAGAGGGTTGA

Protein sequence

MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG*

Homology

[Close]

BLAST of CSPI06G30600 vs. ExPASy TrEMBL
Match: A0A0A0KK81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501280 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.0e-121
Identity = 227/229 (99.13%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60
           MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEI RLIT LRLLRSYF
Sbjct: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIERLITVLRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180
           SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180

Query: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 229

[Close]

BLAST of CSPI06G30600 vs. ExPASy TrEMBL
Match: A0A5D3CLG2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002490 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 9.5e-119
Identity = 222/229 (96.94%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60
           MARRKAKKTVKKS+PSP+LEAKDE ANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF
Sbjct: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180
           SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNF LEEPSDN+VLGMPDI QTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180

Query: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           V NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 229

[Close]

BLAST of CSPI06G30600 vs. ExPASy TrEMBL
Match: A0A1S3B1M1 (uncharacterized protein LOC103485008 OS=Cucumis melo OX=3656 GN=LOC103485008 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 9.5e-119
Identity = 222/229 (96.94%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60
           MARRKAKKTVKKS+PSP+LEAKDE ANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF
Sbjct: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180
           SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNF LEEPSDN+VLGMPDI QTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180

Query: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           V NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 229

[Close]

BLAST of CSPI06G30600 vs. ExPASy TrEMBL
Match: A0A1S4DWB9 (uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.6e-108
Identity = 210/235 (89.36%), Postives = 215/235 (91.49%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPILEAKDEAA------NDEDVERHAAAIRAIRDVEIGRLITELR 60
           MARRKAKKTVKKSSPS    AKDEAA      +DEDVERHAAAIRAIRDVEI RLITELR
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTHSDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHA 120
           LLRSYFNKEQLQTPLLQFFEEKLP LSIS  G+QGEIEVQWKDTEDEL TNPADG+DIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDIHA 120

Query: 121 SLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPD 180
           SLLHRLS AYP CSAGMRSFNGFEFSSKSVKTNPF  ENLQIPNFVLEEPSDN+VLGMPD
Sbjct: 121 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGMPD 180

Query: 181 IHQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           I QTPG+SNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 ILQTPGISNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 235

[Close]

BLAST of CSPI06G30600 vs. ExPASy TrEMBL
Match: A0A6J1ILD3 (uncharacterized protein LOC111478496 OS=Cucurbita maxima OX=3661 GN=LOC111478496 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106
Identity = 206/240 (85.83%), Postives = 215/240 (89.58%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPILEAKDEAAN------------DEDVERHAAAIRAIRDVEIGR 60
           MARRKAKK+VKKSSPSP+ EAKD +AN            DEDVERHA AIRAIRDVEI R
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPAD 120
           LITELRLLRSYFNKEQLQTPLLQFF EKLP LSISR GEQGEIEVQWKDTEDEL TNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFVEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNL 180
           GIDIHASLLHRLS AYPNCSAG+RSFNGFEFSSKSVKTNPF VENLQIPNFVLEEPSDN+
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGIRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNM 180

Query: 181 VLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 229
           VLGMPD+ QTPG SNQRLSIGMTPKTRRLPKPGE++VSIHGSPLGVY+E NMEAIHESEE
Sbjct: 181 VLGMPDLLQTPGASNQRLSIGMTPKTRRLPKPGEVIVSIHGSPLGVYREYNMEAIHESEE 240

[Close]

BLAST of CSPI06G30600 vs. NCBI nr
Match: XP_004143493.2 (uncharacterized protein LOC101215210 [Cucumis sativus] >KAE8647570.1 hypothetical protein Csa_004420 [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 2.3e-122
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60
           MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF
Sbjct: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180
           SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180

Query: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 229

[Close]

BLAST of CSPI06G30600 vs. NCBI nr
Match: XP_008440665.1 (PREDICTED: uncharacterized protein LOC103485008 [Cucumis melo] >KAA0036267.1 uncharacterized protein E6C27_scaffold18G00660 [Cucumis melo var. makuwa] >TYK12661.1 uncharacterized protein E5676_scaffold255G002490 [Cucumis melo var. makuwa])

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-118
Identity = 222/229 (96.94%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60
           MARRKAKKTVKKS+PSP+LEAKDE ANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF
Sbjct: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180
           SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNF LEEPSDN+VLGMPDI QTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180

Query: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           V NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 229

[Close]

BLAST of CSPI06G30600 vs. NCBI nr
Match: KAG6604007.1 (hypothetical protein SDJN03_04616, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109
Identity = 212/241 (87.97%), Postives = 218/241 (90.46%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPILEAKDEAAN------------DEDVERHAAAIRAIRDVEIGR 60
           MARRKAKK+VKKSSPSPI EAKD +AN            DEDVERHA AIRAIRDVEI R
Sbjct: 1   MARRKAKKSVKKSSPSPIREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEEKLP LSISR GEQGEIEVQWKDTEDEL TNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNL 180
           GIDIHASLLHRLS AYPNCSAGMRSFNGFEFSSKSVKTNPF VENLQIPNF LEEPSDN+
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 VLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 230
           VLGMPD+ QTPGVSNQRLSIGMTPKTRRLPKPGE+LVSIHGSPLGVY+EDNMEAIHESEE
Sbjct: 181 VLGMPDLLQTPGVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREDNMEAIHESEE 240

[Close]

BLAST of CSPI06G30600 vs. NCBI nr
Match: XP_023543921.1 (uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.9 bits (1034), Expect = 1.8e-108
Identity = 209/241 (86.72%), Postives = 218/241 (90.46%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPILEAKDEAAN------------DEDVERHAAAIRAIRDVEIGR 60
           MARRKAKK+VKKSSPSP+ EAKD +AN            DEDVERHA AIRAIRDVEI R
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEEKLP LSISR GEQGEIEVQWK+TEDEL TNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNL 180
           GIDIHASLLHRLS AYPNCSAGMRSFNGFEFSSKSVKTNPF VENLQIPNF LEEPSDN+
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 VLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 230
           VLGMPD+ QTPGVSNQRLSIGMTPKTRRLPKPGE+LVSIHGSPLGVY+E+NMEAIHESEE
Sbjct: 181 VLGMPDLLQTPGVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEE 240

[Close]

BLAST of CSPI06G30600 vs. NCBI nr
Match: XP_038882572.1 (uncharacterized protein LOC120073798 [Benincasa hispida])

HSP 1 Score: 402.5 bits (1033), Expect = 2.4e-108
Identity = 204/229 (89.08%), Postives = 216/229 (94.32%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60
           M RRKA+KTVKK SPSP+ EAKDEAANDEDVERHAAAIRAIRDVEI RLITELRLLRSYF
Sbjct: 1   MGRRKARKTVKKCSPSPVREAKDEAANDEDVERHAAAIRAIRDVEIERLITELRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120
           N+EQLQTPLLQFF+EKLP LSISR GE+GEIEVQWK+ EDEL +NPAD IDIHASLLHRL
Sbjct: 61  NQEQLQTPLLQFFKEKLPSLSISRRGEEGEIEVQWKNAEDELHSNPADRIDIHASLLHRL 120

Query: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180
           S AYPNCSAG+RS NGFEFSSKSVKTNPF VENL+IPNFVLEEPSDN+VLGMPDI QTPG
Sbjct: 121 STAYPNCSAGVRSLNGFEFSSKSVKTNPFNVENLEIPNFVLEEPSDNMVLGMPDILQTPG 180

Query: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           V+NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVY+EDNMEAIHESEEG
Sbjct: 181 VNNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYREDNMEAIHESEEG 229

[Close]

BLAST of CSPI06G30600 vs. TAIR 10
Match: AT4G39630.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 198.4 bits (503), Expect = 6.4e-51
Identity = 117/232 (50.43%), Postives = 154/232 (66.38%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSP------ILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELR 60
           M +RKAK+ VK +           +E K E   DE+VER  AAIRAIRDVEI +++T LR
Sbjct: 1   MPKRKAKECVKLTEEDRNDEKRIRIEEKKEDFVDEEVERQIAAIRAIRDVEIEQMLTALR 60

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHA 120
           LLRSYF +EQL TP+L FF+E LP LSISR  E GEIE++W+D   +      +G+D++ 
Sbjct: 61  LLRSYFTEEQLHTPVLDFFKENLPDLSISRNEETGEIELKWRDENGDSFAGNENGVDMNY 120

Query: 121 SLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPD 180
           S+L RLS+ + +  +   S  G++    +VK N    +N Q+ N V +  S+N +L   D
Sbjct: 121 SILKRLSMRFTDLYS-RSSLGGYDLPD-NVKANLLGTDNPQLDNLVFQGTSENQMLPGHD 180

Query: 181 IHQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKED-NMEAIHE 226
             QTPGV+ QRLS GMTPKT RLPK GEM++S+HGSPLGVYKED NM AI+E
Sbjct: 181 AFQTPGVNGQRLSFGMTPKTLRLPKAGEMMLSVHGSPLGVYKEDHNMGAINE 230

The following BLAST results are available for this feature:

BLAST of CSPI06G30600 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G30600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK81	6.0e-121	99.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501280 PE=4 SV=1	[more]
A0A5D3CLG2	9.5e-119	96.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B1M1	9.5e-119	96.94	uncharacterized protein LOC103485008 OS=Cucumis melo OX=3656 GN=LOC103485008 PE=...	[more]
A0A1S4DWB9	2.6e-108	89.36	uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=...	[more]
A0A6J1ILD3	1.4e-106	85.83	uncharacterized protein LOC111478496 OS=Cucurbita maxima OX=3661 GN=LOC111478496...	[more]

BLAST of CSPI06G30600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143493.2	2.3e-122	100.00	uncharacterized protein LOC101215210 [Cucumis sativus] >KAE8647570.1 hypothetica...	[more]
XP_008440665.1	2.0e-118	96.94	PREDICTED: uncharacterized protein LOC103485008 [Cucumis melo] >KAA0036267.1 unc...	[more]
KAG6604007.1	1.3e-109	87.97	hypothetical protein SDJN03_04616, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023543921.1	1.8e-108	86.72	uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo]	[more]
XP_038882572.1	2.4e-108	89.08	uncharacterized protein LOC120073798 [Benincasa hispida]	[more]

BLAST of CSPI06G30600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39630.1	6.4e-51	50.43	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR37248	TRANSLATION INITIATION FACTOR	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G30600.1	CSPI06G30600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003743	translation initiation factor activity