CSPI06G29440 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G29440
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein RMD5 homolog
Location	Chr6: 25569544 .. 25573795 (+)
RNA-Seq Expression	CSPI06G29440
Synteny	CSPI06G29440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCAAACGGAAGGGGAAAAATCCCTCTCATTCGAGTCCTCACTTCCTACCAAGGTTTCTTCCATTCTCTTCTCTCTTCTTCTTCTTGCTGATCTATGTATGCACTCCATTTTCTTCATACTATATTCAGATCTAATTTTTATATTTTCTACATTTTTGTTGAATCCTATTTCTTCTTCTTGTTGGGTTAAATTTATTTTTCGTATCTGAATCGCTTTGCTCTCATTTTTTTATTCAGATTCGCATCTTTTCCTTGCCTTGCTTCCAATCCATCAATTTCTATCTTTCAGTTTCTTTTTTTTTTGTTTACTTGTTTCGGTTTCATTCATAAGAACCTCTATTTATCAAGATTTATGTTGGGAACTTCTGTTGGAGTGCGAATTATAGTTTTTTTTTTTTTTTTTTTAATGATTTCTGGCTTTGGGTGTTTTGTTTTTGTTCCTAACTTTTGGGGTTGTGCAAGTTAGTCCGTTTTCCTTCAACTTCTTTTCCCCGAATTTGATCGTTTTACATTGGATATCGTCTACTGCTTAAGTTAGTAGTTCTTGTGTTCAATTGACTGTTGAATCGGTAGGTAGTCATCGTATGATGGGTTATATTTGATATCTGTAATTGTTGTATCTTTATAAATATTGAAGCGAGCGTTTTCTACCGTTTAATTCTCTTCTTATCCTGTGTTTCGTATGGTTGCACATTCGTAGTACAAATTCCACGTTAACAGTTCTAGAATACCCACCTTTCGAGAATATATAATTTTCAGATACCATATATTCACATTCTTTACCATTTTTATCACACCCTTCAATATCAATTGAGACATGTATCCAGTTATCATTTTGTCTCGTCTGTAATTTGGTCTCACTATCACTTTGATGCTCACAATTACTTGATCTTGTTGATCCATTAAGCCCGTTGCAAAAAGATTTTGTTCTACTGCCAACTGTGATTGAGAATGAAAATTTATTTGTATTCCCTATTTCCATCACTCATCTCATCGCATCGTGATTGGTAATCTGGTGTTATTAGTGCATCTTTCAGTTTGAAGCGTTAGACACTGGATAGCCGTAAGTTTGCTCTAGCTGTACTACATATGTTGTCTTAAGAAAATGATTGTCTCACTTATTTTCTAAATTCAATTTCATTGAAACTATGGTTCTTTTTTTTTTCTTTCGATGTAGGAGAGGACCTTTGTAGTAATGCATATTCTGCTGAAGTGTTTGAATATTTTTGAAAGAAGTCTAATAAGCATTGATATTTGGGGTTGCTTTTCTTTCTTGTCTAATGACCCGTAGATATGGATTGTCCATTTAATTTTGGTTTAAAATTTCAAGGAACAACATCCATATTTGGTTGAGTTTATATTTTATAGGATCTCATTGGTTTTAGAAAGTAGTTGAATTAGATGCACCAAGCATTTGGTAAAGAATCCTAATGAGTAGTGATCCCTATTTTAGAACACTCAAGCAAAATTGTGCAGAGTTGTGATTTTGCGTCTAGATGTAGGGATGGTGCCTGACATTGAGCCCACAATTGTTACTTTAGTATAACATTTGCTATTATACTAGGGTTAAATCAAACCAAAGAAAGGGGGAAAAGTCCTTTTAATCCATCATCTTCATTTGTCATTCTCTCCACAAATAGATGTGGTAGAGAAAGGGAGATGAGGGTCTAAAATGTCAATTTCAATGGAAATATTGATCTTAATTTTATGGAAATTTTGATGGAAATATCGATAAAATGTCGATTTCCATGGATATTTTTTAAAAGACTAAATATAAGAAAAGAATTTTTTAAAAATTTGAACATGTTAATATGTCTTCTATTTATATTATATTTACATAAGTGACATTATGTTGCTTTTTTTTTTTTTATGGTTTCATGGTTTTTTTTCTATAAACTATGTAAACATTGGTTCACCCCTTATCTAACCAATGGAAATGTGGAAATATCGACGTGTCAATGGAAATTTAATACTATATTAGGAGACCTAAGAGGAAGATTAAGAGAGCAAATGCCGTAAATGATGTGGAAAATGGGAGTGGGATAGTTAGAGGTCCTAAATTTTAGTTGTTTATATGTTATTGTGTAGTATATTTTTGTGATTTTGTAGCTATGTCTAAGAAAGCAATAAAGAGAAACACTTGTAATATTTGAGTAATGTTACCAAGACTTGTAATATTTGAGTTCTATTACTGTTATATTTATAGCTAGTGACCCGTATGCCTGGCCTATTTACTTATTTTTTATTCATTTAGTGCTTACTTTTAGCTGAATTCTTATATCTTGAAAACTCTTTGTTTTATTGAAGTGCTAAATTGTCAACTTAATAACCTTTTTTGATGTTTGGTTGATGGGATTTCTACTCATGTTTGATTTTAATACTAAGGTGAATGTGACTAAATAAATAATATGGGGAACTGAAGCAGTGAAAACATTTTGAACTATTATTACGACCTCAGGATTTTCTCCTCCTATTGCTTTTGTAGGGTTTTTAGCTATAAAGTAGGTAAATGATTTTACTTTAGAGTACTAAAACCTTTTCTTTCCTTGGCAGAACTCTGTATTAAATTAATGGCATGGCTGCTACGCCCTTTGCCCTCCCTTAGTTTTTCTTGGCATTCCTGTCTTCGAGTTTTTTTGACACCCTGAGATTCTTCCATTCCATTGGTCATTAGTAATATCTGTTTGTTGGTGAGTAAATTTGTTTGACAGTATGAGTTTCTTTGCAGGTTAGAGTAAGAAATGGAGTTGGATAGCATTAAAGATGCATTTGACCGTGTGACAAAGAAGCAGAAATTGTCTTCTTCCAAAAGTCAAGAAGTAGTTGACCAAATGCATCTGGAACTGGAACAGGTGCTACAAAAGATACAACTAGCTGATAATCCGGAATGTCCTATTGATATGAATTCAGTTTTTGCTGCACTGAAAACTAAATTGAAGGATATTGCCCCACTCACTCAGCTCGAAAGCACACAGAAGGAGTTGAATACTGCTCTGACCAAGTATCCAAAGCTTGTTGAAAAATCTTTCAATCCAGATATATCAAAAGCTTATAGAAACGTTGATTTTGATAGGCATACTGTTAACCAGATTATTGCTAGTCATTTCTATCGCCAGGGTATGTTTGAACTTGGTGACTGCTTTATTAGTGAGGCTGGCGAGTCAGAATCTGCTGCTTCATTGAGGTCTCCATTCCAGGAAATGTATCAGATCCTTGAATCCATGAAGTCCCGGAATCTAGAGCCAGCTCTGAACTGGGCTCTGAATAACTCAAATAAACTTAAGGAATGTGGGTCGGATCTTTTGCTAAAACTTCATAGCATGCAGTTCATGGAGATTCTACAAAAGGGAGATAGACATGATGCTTTGAAGTACGCTAGGACCTACCTTGCTCCTCTTGCATCCAACCACATGGCTGAACTTCAGAAGCTTATGGCTTGCCTGTTGTGGACTGGAAGGCTTGATTGCTCCCCATACTCTCATTCTCAATTATTATCAGTAGCTAACTGGGATAAAGTTGCTGAGGAGCTTATACGACAGTTTTGCAATTTTCTTGGTCAGTCCTATGAGAGCCCCTTAGGTGTAACGGTTGCAGCAGGGGTCCAGGGATTGCCTCCTCTCTTGAAGTTTATGAATGTTATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTTCCTGTGGAGTTGGACAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCAGTGTCGAAGGAACAGTCAACCGAAGAAAATCCACCAATGTTAATGCTGTGTGGCCATGTCCTCTGCAAGCAGTCTATCATGAAGATGTCCAAAAACAGCACAAAATCATTTAAGTGCCCGTATTGTCCAACAGACATTGATGCTACACGGTGTAGGCAATTGTACTTTTGACGCTTACACAAAAGTCATGGTTAATGTTGTACGAAACTTCCTCTCTTCAACTGAACCAATATTTGCTGGATTTAGTTGTGGTGTAACAAAGGGTGTGAAATGGGGGGGAAATGGTTGTCAGTTGTGTACTGTTTGTTGCTGTATTTGTTGTAAATACATATTCTTTCTACGTGTTGGAATGTTGAGCAAGTCACTCCATAGACATCTTTTAAGTTTGATGATAGGTTTACTGCATAGGAGTGTGCTTAGCTGCTTCTGGAGCTCACCTCCTTCTGAATAAATATGTTTTCTCCTTTTAATTTCTCAACATAACTATAATTGATATCAAAGAAATTTGAGCCCTA

mRNA sequence

CGCAAACGGAAGGGGAAAAATCCCTCTCATTCGAGTCCTCACTTCCTACCAAGGTTAGAGTAAGAAATGGAGTTGGATAGCATTAAAGATGCATTTGACCGTGTGACAAAGAAGCAGAAATTGTCTTCTTCCAAAAGTCAAGAAGTAGTTGACCAAATGCATCTGGAACTGGAACAGGTGCTACAAAAGATACAACTAGCTGATAATCCGGAATGTCCTATTGATATGAATTCAGTTTTTGCTGCACTGAAAACTAAATTGAAGGATATTGCCCCACTCACTCAGCTCGAAAGCACACAGAAGGAGTTGAATACTGCTCTGACCAAGTATCCAAAGCTTGTTGAAAAATCTTTCAATCCAGATATATCAAAAGCTTATAGAAACGTTGATTTTGATAGGCATACTGTTAACCAGATTATTGCTAGTCATTTCTATCGCCAGGGTATGTTTGAACTTGGTGACTGCTTTATTAGTGAGGCTGGCGAGTCAGAATCTGCTGCTTCATTGAGGTCTCCATTCCAGGAAATGTATCAGATCCTTGAATCCATGAAGTCCCGGAATCTAGAGCCAGCTCTGAACTGGGCTCTGAATAACTCAAATAAACTTAAGGAATGTGGGTCGGATCTTTTGCTAAAACTTCATAGCATGCAGTTCATGGAGATTCTACAAAAGGGAGATAGACATGATGCTTTGAAGTACGCTAGGACCTACCTTGCTCCTCTTGCATCCAACCACATGGCTGAACTTCAGAAGCTTATGGCTTGCCTGTTGTGGACTGGAAGGCTTGATTGCTCCCCATACTCTCATTCTCAATTATTATCAGTAGCTAACTGGGATAAAGTTGCTGAGGAGCTTATACGACAGTTTTGCAATTTTCTTGGTCAGTCCTATGAGAGCCCCTTAGGTGTAACGGTTGCAGCAGGGGTCCAGGGATTGCCTCCTCTCTTGAAGTTTATGAATGTTATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTTCCTGTGGAGTTGGACAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCAGTGTCGAAGGAACAGTCAACCGAAGAAAATCCACCAATGTTAATGCTGTGTGGCCATGTCCTCTGCAAGCAGTCTATCATGAAGATGTCCAAAAACAGCACAAAATCATTTAAGTGCCCGTATTGTCCAACAGACATTGATGCTACACGGTGTAGGCAATTGTACTTTTGACGCTTACACAAAAGTCATGGTTAATGTTGTACGAAACTTCCTCTCTTCAACTGAACCAATATTTGCTGGATTTAGTTGTGGTGTAACAAAGGGTGTGAAATGGGGGGGAAATGGTTGTCAGTTGTGTACTGTTTGTTGCTGTATTTGTTGTAAATACATATTCTTTCTACGTGTTGGAATGTTGAGCAAGTCACTCCATAGACATCTTTTAAGTTTGATGATAGGTTTACTGCATAGGAGTGTGCTTAGCTGCTTCTGGAGCTCACCTCCTTCTGAATAAATATGTTTTCTCCTTTTAATTTCTCAACATAACTATAATTGATATCAAAGAAATTTGAGCCCTA

Coding sequence (CDS)

ATGGAGTTGGATAGCATTAAAGATGCATTTGACCGTGTGACAAAGAAGCAGAAATTGTCTTCTTCCAAAAGTCAAGAAGTAGTTGACCAAATGCATCTGGAACTGGAACAGGTGCTACAAAAGATACAACTAGCTGATAATCCGGAATGTCCTATTGATATGAATTCAGTTTTTGCTGCACTGAAAACTAAATTGAAGGATATTGCCCCACTCACTCAGCTCGAAAGCACACAGAAGGAGTTGAATACTGCTCTGACCAAGTATCCAAAGCTTGTTGAAAAATCTTTCAATCCAGATATATCAAAAGCTTATAGAAACGTTGATTTTGATAGGCATACTGTTAACCAGATTATTGCTAGTCATTTCTATCGCCAGGGTATGTTTGAACTTGGTGACTGCTTTATTAGTGAGGCTGGCGAGTCAGAATCTGCTGCTTCATTGAGGTCTCCATTCCAGGAAATGTATCAGATCCTTGAATCCATGAAGTCCCGGAATCTAGAGCCAGCTCTGAACTGGGCTCTGAATAACTCAAATAAACTTAAGGAATGTGGGTCGGATCTTTTGCTAAAACTTCATAGCATGCAGTTCATGGAGATTCTACAAAAGGGAGATAGACATGATGCTTTGAAGTACGCTAGGACCTACCTTGCTCCTCTTGCATCCAACCACATGGCTGAACTTCAGAAGCTTATGGCTTGCCTGTTGTGGACTGGAAGGCTTGATTGCTCCCCATACTCTCATTCTCAATTATTATCAGTAGCTAACTGGGATAAAGTTGCTGAGGAGCTTATACGACAGTTTTGCAATTTTCTTGGTCAGTCCTATGAGAGCCCCTTAGGTGTAACGGTTGCAGCAGGGGTCCAGGGATTGCCTCCTCTCTTGAAGTTTATGAATGTTATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTTCCTGTGGAGTTGGACAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCAGTGTCGAAGGAACAGTCAACCGAAGAAAATCCACCAATGTTAATGCTGTGTGGCCATGTCCTCTGCAAGCAGTCTATCATGAAGATGTCCAAAAACAGCACAAAATCATTTAAGTGCCCGTATTGTCCAACAGACATTGATGCTACACGGTGTAGGCAATTGTACTTTTGA

Protein sequence

MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAALKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKLKECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF*

Homology

[Close]

BLAST of CSPI06G29440 vs. ExPASy Swiss-Prot
Match: Q9T075 (Protein RMD5 homolog OS=Arabidopsis thaliana OX=3702 GN=RMD5 PE=1 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 2.2e-128
Identity = 234/392 (59.69%), Postives = 300/392 (76.53%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECP-IDMNSVFA 60
           MEL SIKDAFDRV  KQKLS SK+ E+V  +  E+++ L  ++   + +   +D  S+ A
Sbjct: 1   MELKSIKDAFDRVATKQKLSYSKTNEIVHMLSQEIDKALSILEETPSSDTMLLDHRSILA 60

Query: 61  ALKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYR-NVDFDRHTVNQII 120
            +K    +IAP+TQLE+T+KEL+ ALTKYPK++EK  NPDISKAYR NV+FD H VNQII
Sbjct: 61  DVKKVFMEIAPITQLEATEKELHAALTKYPKVLEKQLNPDISKAYRHNVEFDTHIVNQII 120

Query: 121 ASHFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSN 180
           A+ FYRQGMF++GDCF++E GESE   S R  F EMY+ILE+MK R+LEPALNWA++NS+
Sbjct: 121 ANFFYRQGMFDIGDCFVAETGESE--CSTRQSFVEMYRILEAMKRRDLEPALNWAVSNSD 180

Query: 181 KLKECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTG 240
           KLKE  SDL +KLHS+ F+EI +  +  +A+ YAR ++A  A + + E+QKLM  LLW  
Sbjct: 181 KLKEARSDLEMKLHSLHFLEIARGKNSKEAIDYARKHIATFADSCLPEIQKLMCSLLWNR 240

Query: 241 RLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMN 300
           +LD SPY  S+ LS A W+   +EL RQ+CN LG+S ESPL +TV AG Q LP LLK+MN
Sbjct: 241 KLDKSPY--SEFLSPALWNNAVKELTRQYCNLLGESSESPLSITVTAGTQALPVLLKYMN 300

Query: 301 -VMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQS 360
            VMA KK +WQ+M+QLPV  +L  EFQFHS+FVCPVSKEQS+++NPPM+M CGHVLCKQ+
Sbjct: 301 VVMANKKLDWQTMEQLPVDAQLSEEFQFHSVFVCPVSKEQSSDDNPPMMMSCGHVLCKQT 360

Query: 361 IMKMSKNSTK-SFKCPYCPTDIDATRCRQLYF 389
           I KMSKN +K SFKCPYCPTD+D +RCRQL+F
Sbjct: 361 INKMSKNGSKSSFKCPYCPTDVDISRCRQLHF 388

[Close]

BLAST of CSPI06G29440 vs. ExPASy Swiss-Prot
Match: O59668 (LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A3.03c PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-52
Identity = 125/379 (32.98%), Postives = 197/379 (51.98%), Query Frame = 0


Query: 34  ELEQVLQKIQLADNPECPIDMNSVFAALKTKLKDIAPLTQLESTQKELNTALTKYPKLVE 93
           ELE +L+  + +   +    M  + A  +   K       L+ T+K+ +T+L ++ K +E
Sbjct: 24  ELESILKDAKKSCLKDPTTSMKELVACSE---KTQQVFDDLKRTEKKFHTSLNRFGKTLE 83

Query: 94  KSFNPDIS--KAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAASLRSPF 153
           K FN D+   K + + +  +  ++  ++ HF+RQG  EL   F  EAG  E + SL   F
Sbjct: 84  KKFNFDLEDIKLHSSFESKKREIDTALSLHFFRQGDVELAHLFCKEAGIEEPSESLH-VF 143

Query: 154 QEMYQILESMKSRNLEPALNWALNNSNKLKECGSDLLLKLHSMQFM-EILQKGDRHDALK 213
             +  I++ ++ ++L+  + WA      L+  GS L   L   + +   L   D   A++
Sbjct: 144 TLLKSIVQGIRDKDLKLPIEWASQCRGYLERKGSSLEYTLQKYRLVSNYLTTKDIMAAIR 203

Query: 214 YARTYLAPLASNHMAELQKLMACLLWTGR---LDCSPYSHSQLLSV-------------- 273
           Y RT +A     H+A++QK M  L +  R   L  +  SH  +  +              
Sbjct: 204 YCRTNMAEFQKKHLADIQKTMIALFFCSRNEVLSGTNDSHDSIHHIISNNAQLNIPQEYI 263

Query: 274 ----ANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVMAGKKQEWQS 333
                +W  +    +R+FC  LG S ESPL + V AG   LP LLK  ++M  K  EW S
Sbjct: 264 DVLDLDWKSLELLFVREFCAALGMSLESPLDIVVNAGAIALPILLKMSSIMKKKHTEWTS 323

Query: 334 MKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSF 389
             +LPV + L   + FHS+F CPVSKEQ+TEENPPM+M CGHV+ K+S+ ++S+N ++ F
Sbjct: 324 QGELPVEIFLPSSYHFHSVFTCPVSKEQATEENPPMMMSCGHVIVKESLRQLSRNGSQRF 383

[Close]

BLAST of CSPI06G29440 vs. ExPASy Swiss-Prot
Match: Q640V2 (E3 ubiquitin-protein ligase RMND5A OS=Xenopus tropicalis OX=8364 GN=rmnd5a PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.1e-51
Identity = 113/333 (33.93%), Postives = 194/333 (58.26%), Query Frame = 0


Query: 64  KLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRN---VDFDRHTVNQIIAS 123
           ++KD   + +L S  K++++++++  K ++K+F+ DIS    +    +  +  +++++  
Sbjct: 67  RIKD--TVQKLASDHKDIHSSVSRVGKAIDKNFDADISSVGIDGCWQNDSQQILSEVMVE 126

Query: 124 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 183
           HF+RQGM ++ +    EAG S   AS + PF E+ +ILE++K R L PAL WA++N   L
Sbjct: 127 HFFRQGMLDVAEELCQEAGLSID-ASQKEPFVELNRILEALKVRVLRPALEWAVSNREML 186

Query: 184 KECGSDLLLKLHSMQFMEILQKG--DRHDALKYARTYLAPLASNHMAELQKLMACLLWTG 243
               S L  KLH + F+ +L  G  ++ +AL+YA+ +  P A NH  ++Q LM  L++  
Sbjct: 187 MAQNSSLEFKLHRLYFISLLMGGTVNQREALQYAKNF-QPFAENHQKDIQVLMGSLVYLR 246

Query: 244 R-LDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFM 303
           + ++ SPY H  LL    W  + +   R  C  LG S ESPL V+ +AG   LP L+   
Sbjct: 247 QGIENSPYVH--LLDANQWADICDIFTRDACALLGLSVESPLSVSFSAGCVALPALINIK 306

Query: 304 NVMAGKK--QEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCK 363
            V+  ++    W    +LP+ V+L ++  +HSIF CP+ ++Q+T+ NPPM ++CGH++ +
Sbjct: 307 AVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNPPMKLVCGHIISR 366

Query: 364 QSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            ++ KM   S    KCPYCP +      +Q++F
Sbjct: 367 DALNKMFNGS--KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of CSPI06G29440 vs. ExPASy Swiss-Prot
Match: Q6GLP4 (E3 ubiquitin-protein ligase RMND5A OS=Xenopus laevis OX=8355 GN=rmnd5a PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.2e-51
Identity = 121/381 (31.76%), Postives = 211/381 (55.38%), Query Frame = 0


Query: 18  KLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAALKTKLKDIAPLTQLEST 77
           +L     +E++D       ++LQ  +   + E    ++ V      ++KD   + +L S 
Sbjct: 23  QLCERSLEELIDYAGGLRREILQAAE--QDGELSGTLSLVLTQCCKRIKD--TVQKLASD 82

Query: 78  QKELNTALTKYPKLVEKSFNPDISKAYRNVD-----FDRHTVNQIIASHFYRQGMFELGD 137
            K++++++++  K ++K+F+ DIS     +D       +  +++++  HF+RQGM ++ +
Sbjct: 83  HKDIHSSVSRVGKAIDKNFDADISSV--GIDGCWQTDSQRILSEVMVEHFFRQGMLDVAE 142

Query: 138 CFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKLKECGSDLLLKLH 197
               EA  S   AS + PF E+ +ILE++K R L PAL WA++N   L    S L  KLH
Sbjct: 143 ELCQEASLSID-ASQKEPFVELNRILEALKVRVLRPALEWAVSNREMLMAQNSSLEFKLH 202

Query: 198 SMQFMEILQKG--DRHDALKYARTYLAPLASNHMAELQKLMACLLWTGR-LDCSPYSHSQ 257
            + F+ +L  G  ++ +AL+YA+ +  P A NH  ++Q LM  L++  + ++ SPY H  
Sbjct: 203 RLYFISLLMGGTVNQQEALQYAKNF-QPFAENHQKDIQVLMGSLVYLRQGIENSPYVH-- 262

Query: 258 LLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVMAGKKQE--W 317
           LL    W  + +   R  C+ LG S ESPL V+ +AG   LP L+    V+  ++    W
Sbjct: 263 LLDANQWADICDIFTRDACSLLGLSVESPLSVSFSAGCVALPALINIKAVIEQRQCSGVW 322

Query: 318 QSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTK 377
               +LP+ V+L ++  +HSIF CP+ ++Q+TE NPPM ++CGH++ + ++ KM   S  
Sbjct: 323 NQKDELPIEVDLGKKCWYHSIFACPILRQQTTENNPPMKLVCGHIISRDALNKMFNGS-- 382

Query: 378 SFKCPYCPTDIDATRCRQLYF 389
             KCPYCP +      +Q++F
Sbjct: 383 KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of CSPI06G29440 vs. ExPASy Swiss-Prot
Match: Q9H871 (E3 ubiquitin-protein transferase RMND5A OS=Homo sapiens OX=9606 GN=RMND5A PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-50
Identity = 113/335 (33.73%), Postives = 193/335 (57.61%), Query Frame = 0


Query: 64  KLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVD-----FDRHTVNQII 123
           ++KD   + +L S  K++++++++  K ++K+F+ DIS     +D       +  +N+++
Sbjct: 67  RIKD--TVQKLASDHKDIHSSVSRVGKAIDKNFDSDISSV--GIDGCWQADSQRLLNEVM 126

Query: 124 ASHFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSN 183
             HF+RQGM ++ +    E+G S    S + PF E+ +ILE++K R L PAL WA++N  
Sbjct: 127 VEHFFRQGMLDVAEELCQESGLSVD-PSQKEPFVELNRILEALKVRVLRPALEWAVSNRE 186

Query: 184 KLKECGSDLLLKLHSMQFMEILQKG--DRHDALKYARTYLAPLASNHMAELQKLMACLLW 243
            L    S L  KLH + F+ +L  G  ++ +AL+YA+ +  P A NH  ++Q LM  L++
Sbjct: 187 MLIAQNSSLEFKLHRLYFISLLMGGTTNQREALQYAKNF-QPFALNHQKDIQVLMGSLVY 246

Query: 244 TGR-LDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLK 303
             + ++ SPY H  LL    W  + +   R  C  LG S ESPL V+ +AG   LP L+ 
Sbjct: 247 LRQGIENSPYVH--LLDANQWADICDIFTRDACALLGLSVESPLSVSFSAGCVALPALIN 306

Query: 304 FMNVMAGKK--QEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVL 363
              V+  ++    W    +LP+ V+L ++  +HSIF CP+ ++Q+T+ NPPM ++CGH++
Sbjct: 307 IKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNPPMKLVCGHII 366

Query: 364 CKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            + ++ KM   S    KCPYCP +      +Q++F
Sbjct: 367 SRDALNKMFNGS--KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of CSPI06G29440 vs. ExPASy TrEMBL
Match: A0A1S3B0U3 (protein RMD5 homolog A OS=Cucumis melo OX=3656 GN=LOC103484906 PE=4 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 8.0e-219
Identity = 382/388 (98.45%), Postives = 386/388 (99.48%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MELDSIKDAFDRVTKKQKLSSSKSQEVVD++HLELEQVLQKIQLADNPECPID+NSVFA 
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDRIHLELEQVLQKIQLADNPECPIDLNSVFAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQL+STQKELN ALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLDSTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of CSPI06G29440 vs. ExPASy TrEMBL
Match: A0A5D3CLJ0 (Protein RMD5-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003520 PE=4 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 8.0e-219
Identity = 382/388 (98.45%), Postives = 386/388 (99.48%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MELDSIKDAFDRVTKKQKLSSSKSQEVVD++HLELEQVLQKIQLADNPECPID+NSVFA 
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDRIHLELEQVLQKIQLADNPECPIDLNSVFAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQL+STQKELN ALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLDSTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of CSPI06G29440 vs. ExPASy TrEMBL
Match: A0A6J1BU35 (protein RMD5 homolog A-like OS=Momordica charantia OX=3673 GN=LOC111005703 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 3.5e-214
Identity = 370/388 (95.36%), Postives = 382/388 (98.45%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MELDSIKD FDRVTKKQKLSSSKSQEV+DQ+HLELEQVLQK+QLADNPECPID+NSVF+ 
Sbjct: 1   MELDSIKDVFDRVTKKQKLSSSKSQEVIDQIHLELEQVLQKVQLADNPECPIDLNSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN AL+KYPKL+EKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNVALSKYPKLIEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
           HFYRQGMFELGDCFI+EAGESESAAS+RSPFQEMYQILE+MKSRNLEPALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFINEAGESESAASMRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYS SQLLS  NW+KVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSATNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of CSPI06G29440 vs. ExPASy TrEMBL
Match: A0A6J1HGI0 (protein RMD5 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463351 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.3e-213
Identity = 371/388 (95.62%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MELDSIKDAFDRVTKKQKLSSSKS EVVDQ+HLELEQVLQKIQLADNPECP+D+ SVF+ 
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAAS+RSPFQEMYQILE+MKSRNL+PALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYS SQLLSV NW+KVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of CSPI06G29440 vs. ExPASy TrEMBL
Match: A0A6J1KU15 (protein RMD5 homolog OS=Cucurbita maxima OX=3661 GN=LOC111497206 PE=4 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 3.3e-212
Identity = 369/388 (95.10%), Postives = 379/388 (97.68%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MELDSIKDAFDRVTKKQKLSSSKS EVVDQ+HLELEQVLQKIQLADNPECP+++ SVF+ 
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVNLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAAS+RSPFQEMYQILE+MKSRNL+PALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYS SQLLSV NW+ VAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWENVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of CSPI06G29440 vs. NCBI nr
Match: XP_004143429.1 (protein RMD5 homolog [Cucumis sativus] >XP_031743696.1 protein RMD5 homolog [Cucumis sativus] >KAE8647535.1 hypothetical protein Csa_003397 [Cucumis sativus])

HSP 1 Score: 777.3 bits (2006), Expect = 6.1e-221
Identity = 387/388 (99.74%), Postives = 388/388 (100.00%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           K+CGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KDCGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of CSPI06G29440 vs. NCBI nr
Match: XP_008440495.1 (PREDICTED: protein RMD5 homolog A [Cucumis melo] >XP_008440496.1 PREDICTED: protein RMD5 homolog A [Cucumis melo] >KAA0036368.1 protein RMD5-like protein A [Cucumis melo var. makuwa] >TYK12763.1 protein RMD5-like protein A [Cucumis melo var. makuwa])

HSP 1 Score: 769.2 bits (1985), Expect = 1.7e-218
Identity = 382/388 (98.45%), Postives = 386/388 (99.48%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MELDSIKDAFDRVTKKQKLSSSKSQEVVD++HLELEQVLQKIQLADNPECPID+NSVFA 
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDRIHLELEQVLQKIQLADNPECPIDLNSVFAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQL+STQKELN ALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLDSTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of CSPI06G29440 vs. NCBI nr
Match: XP_038883497.1 (protein RMD5 homolog [Benincasa hispida] >XP_038883498.1 protein RMD5 homolog [Benincasa hispida] >XP_038883499.1 protein RMD5 homolog [Benincasa hispida])

HSP 1 Score: 760.8 bits (1963), Expect = 5.9e-216
Identity = 378/388 (97.42%), Postives = 383/388 (98.71%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MELDSIKDAFDRVTKKQKLSSSKSQEV D++HLELEQVLQKIQLADNPECPID++SV A 
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVADKIHLELEQVLQKIQLADNPECPIDLSSVAAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LK KLKDIAPLTQLESTQKELN ALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKAKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILE+MKSRNLEPALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILEAMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of CSPI06G29440 vs. NCBI nr
Match: XP_022132999.1 (protein RMD5 homolog A-like [Momordica charantia] >XP_022133000.1 protein RMD5 homolog A-like [Momordica charantia])

HSP 1 Score: 753.8 bits (1945), Expect = 7.2e-214
Identity = 370/388 (95.36%), Postives = 382/388 (98.45%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MELDSIKD FDRVTKKQKLSSSKSQEV+DQ+HLELEQVLQK+QLADNPECPID+NSVF+ 
Sbjct: 1   MELDSIKDVFDRVTKKQKLSSSKSQEVIDQIHLELEQVLQKVQLADNPECPIDLNSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN AL+KYPKL+EKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNVALSKYPKLIEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
           HFYRQGMFELGDCFI+EAGESESAAS+RSPFQEMYQILE+MKSRNLEPALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFINEAGESESAASMRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYS SQLLS  NW+KVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSATNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of CSPI06G29440 vs. NCBI nr
Match: XP_022963019.1 (protein RMD5 homolog [Cucurbita moschata] >XP_022963020.1 protein RMD5 homolog [Cucurbita moschata] >XP_022963021.1 protein RMD5 homolog [Cucurbita moschata] >XP_022963022.1 protein RMD5 homolog [Cucurbita moschata] >XP_022963023.1 protein RMD5 homolog [Cucurbita moschata] >XP_023517860.1 protein RMD5 homolog [Cucurbita pepo subsp. pepo] >XP_023517861.1 protein RMD5 homolog [Cucurbita pepo subsp. pepo] >XP_023517862.1 protein RMD5 homolog [Cucurbita pepo subsp. pepo] >KAG7026890.1 Protein RMD5-like A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 751.1 bits (1938), Expect = 4.7e-213
Identity = 371/388 (95.62%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MELDSIKDAFDRVTKKQKLSSSKS EVVDQ+HLELEQVLQKIQLADNPECP+D+ SVF+ 
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAAS+RSPFQEMYQILE+MKSRNL+PALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYS SQLLSV NW+KVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of CSPI06G29440 vs. TAIR 10
Match: AT4G37880.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 460.3 bits (1183), Expect = 1.5e-129
Identity = 234/392 (59.69%), Postives = 300/392 (76.53%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECP-IDMNSVFA 60
           MEL SIKDAFDRV  KQKLS SK+ E+V  +  E+++ L  ++   + +   +D  S+ A
Sbjct: 1   MELKSIKDAFDRVATKQKLSYSKTNEIVHMLSQEIDKALSILEETPSSDTMLLDHRSILA 60

Query: 61  ALKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYR-NVDFDRHTVNQII 120
            +K    +IAP+TQLE+T+KEL+ ALTKYPK++EK  NPDISKAYR NV+FD H VNQII
Sbjct: 61  DVKKVFMEIAPITQLEATEKELHAALTKYPKVLEKQLNPDISKAYRHNVEFDTHIVNQII 120

Query: 121 ASHFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSN 180
           A+ FYRQGMF++GDCF++E GESE   S R  F EMY+ILE+MK R+LEPALNWA++NS+
Sbjct: 121 ANFFYRQGMFDIGDCFVAETGESE--CSTRQSFVEMYRILEAMKRRDLEPALNWAVSNSD 180

Query: 181 KLKECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTG 240
           KLKE  SDL +KLHS+ F+EI +  +  +A+ YAR ++A  A + + E+QKLM  LLW  
Sbjct: 181 KLKEARSDLEMKLHSLHFLEIARGKNSKEAIDYARKHIATFADSCLPEIQKLMCSLLWNR 240

Query: 241 RLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMN 300
           +LD SPY  S+ LS A W+   +EL RQ+CN LG+S ESPL +TV AG Q LP LLK+MN
Sbjct: 241 KLDKSPY--SEFLSPALWNNAVKELTRQYCNLLGESSESPLSITVTAGTQALPVLLKYMN 300

Query: 301 -VMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQS 360
            VMA KK +WQ+M+QLPV  +L  EFQFHS+FVCPVSKEQS+++NPPM+M CGHVLCKQ+
Sbjct: 301 VVMANKKLDWQTMEQLPVDAQLSEEFQFHSVFVCPVSKEQSSDDNPPMMMSCGHVLCKQT 360

Query: 361 IMKMSKNSTK-SFKCPYCPTDIDATRCRQLYF 389
           I KMSKN +K SFKCPYCPTD+D +RCRQL+F
Sbjct: 361 INKMSKNGSKSSFKCPYCPTDVDISRCRQLHF 388

[Close]

BLAST of CSPI06G29440 vs. TAIR 10
Match: AT2G22690.1 (zinc ion binding )

HSP 1 Score: 435.3 bits (1118), Expect = 5.3e-122
Identity = 223/390 (57.18%), Postives = 288/390 (73.85%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MEL ++KDAFDRVTKKQKL  SK+ EVVD+M  E+++ L+ IQ  DN E      SV A 
Sbjct: 1   MELKNVKDAFDRVTKKQKLCYSKTHEVVDKMSQEIDKALKTIQ-EDNHE------SVVAD 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LK   ++IAP+  LE++QKE+N  LTKYPK ++K+ NPDIS AYRNV FD HTV+QI+A 
Sbjct: 61  LKKTFEEIAPINLLEASQKEINGVLTKYPKALDKTLNPDISTAYRNVKFDTHTVHQILAQ 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
            FYRQGM+++GDCFISE GE +  +S+   F EM  ILE+MK R+L PAL W  +NS+KL
Sbjct: 121 FFYRQGMYDVGDCFISETGEVKPESSVTKAFMEMNMILEAMKERDLGPALKWVASNSDKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNH--MAELQKLMACLLWTG 240
           KE  SDL LKLHS+ F+EI +     +A+ YAR + A  +++     E+QKLM  LLW  
Sbjct: 181 KEAKSDLELKLHSLHFLEIAKDKTSEEAINYARKHFATYSADSCCFPEIQKLMCSLLWIR 240

Query: 241 RLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMN 300
            L+ SPY  S+ LS   W   A+EL RQ+C  LG+S ESPL VTVAAG Q LP  LK++N
Sbjct: 241 NLNKSPY--SEFLSPVLWTNAAKELTRQYCILLGESPESPLSVTVAAGSQVLPTFLKYLN 300

Query: 301 VMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSI 360
           V+  K++EWQ+M+QL VPVEL  E++F+S+FVCPVSKE S+E+NPPM + CGHVLCKQSI
Sbjct: 301 VLPEKRKEWQTMEQLLVPVELSEEYRFYSVFVCPVSKEHSSEDNPPMRLACGHVLCKQSI 360

Query: 361 MKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            +MS+N ++SFKCPYCPTDIDA++C+QLYF
Sbjct: 361 NRMSRNGSRSFKCPYCPTDIDASQCKQLYF 381

[Close]

BLAST of CSPI06G29440 vs. TAIR 10
Match: AT2G22690.2 (zinc ion binding )

HSP 1 Score: 435.3 bits (1118), Expect = 5.3e-122
Identity = 223/390 (57.18%), Postives = 288/390 (73.85%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60
           MEL ++KDAFDRVTKKQKL  SK+ EVVD+M  E+++ L+ IQ  DN E      SV A 
Sbjct: 1   MELKNVKDAFDRVTKKQKLCYSKTHEVVDKMSQEIDKALKTIQ-EDNHE------SVVAD 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LK   ++IAP+  LE++QKE+N  LTKYPK ++K+ NPDIS AYRNV FD HTV+QI+A 
Sbjct: 61  LKKTFEEIAPINLLEASQKEINGVLTKYPKALDKTLNPDISTAYRNVKFDTHTVHQILAQ 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180
            FYRQGM+++GDCFISE GE +  +S+   F EM  ILE+MK R+L PAL W  +NS+KL
Sbjct: 121 FFYRQGMYDVGDCFISETGEVKPESSVTKAFMEMNMILEAMKERDLGPALKWVASNSDKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNH--MAELQKLMACLLWTG 240
           KE  SDL LKLHS+ F+EI +     +A+ YAR + A  +++     E+QKLM  LLW  
Sbjct: 181 KEAKSDLELKLHSLHFLEIAKDKTSEEAINYARKHFATYSADSCCFPEIQKLMCSLLWIR 240

Query: 241 RLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMN 300
            L+ SPY  S+ LS   W   A+EL RQ+C  LG+S ESPL VTVAAG Q LP  LK++N
Sbjct: 241 NLNKSPY--SEFLSPVLWTNAAKELTRQYCILLGESPESPLSVTVAAGSQVLPTFLKYLN 300

Query: 301 VMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSI 360
           V+  K++EWQ+M+QL VPVEL  E++F+S+FVCPVSKE S+E+NPPM + CGHVLCKQSI
Sbjct: 301 VLPEKRKEWQTMEQLLVPVELSEEYRFYSVFVCPVSKEHSSEDNPPMRLACGHVLCKQSI 360

Query: 361 MKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            +MS+N ++SFKCPYCPTDIDA++C+QLYF
Sbjct: 361 NRMSRNGSRSFKCPYCPTDIDASQCKQLYF 381

[Close]

BLAST of CSPI06G29440 vs. TAIR 10
Match: AT5G09630.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 362.1 bits (928), Expect = 5.7e-100
Identity = 187/387 (48.32%), Postives = 272/387 (70.28%), Query Frame = 0


Query: 5   SIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAALKTK 64
           +++DAFDRV+KKQKL  S +Q+V+D +   ++  L +IQL ++    ++  SV   L+ K
Sbjct: 8   TVRDAFDRVSKKQKLYHSVTQDVIDLVCDGIQDTLTRIQLGNDD--GVEPESVLTELRRK 67

Query: 65  LKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIASHFYR 124
           L  + P+ QL+ + KE   +L+K  KL+E S++PDIS A  +VDFD + VN+I+  H YR
Sbjct: 68  LDALLPIIQLQKSHKETKWSLSKLVKLLEVSYHPDISLACFSVDFDINLVNKILIHHCYR 127

Query: 125 QGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKLKECG 184
           +G+F++GDC + EAG  E    +RS F E +QI++S+K RN+EPA+ W   N  KLK+  
Sbjct: 128 EGLFDVGDCLVKEAGREEE-TEVRSQFLEFHQIVDSLKLRNIEPAMRWIFANRGKLKQKS 187

Query: 185 SDLLLKLHSMQFMEILQKGDRHDALKYARTYLA--PLASNHMAELQKLMACLLWTGRLDC 244
           S L  KL S+++ +IL++G   DAL+YART+    PL   H  E+QKL+ CLLW G  + 
Sbjct: 188 SKLEFKLLSLKYCDILREGKSDDALEYARTHFTQYPL---HFKEIQKLITCLLWIGNFEK 247

Query: 245 SPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVMAG 304
           SPY  ++++S + WDKV +ELI ++ + L Q   SPL V ++AG + LP LLK +++MA 
Sbjct: 248 SPY--AEIVSPSCWDKVTKELIMEYHHLLDQPINSPLKVALSAGYESLPSLLKLVHLMAL 307

Query: 305 KKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMS 364
            KQEWQ+MKQLPVP+EL  E++FHS FVCPVS++QS+EENPPM + CGHV+ KQS+M++S
Sbjct: 308 TKQEWQAMKQLPVPLELGNEYKFHSAFVCPVSRDQSSEENPPMQLPCGHVISKQSMMRLS 367

Query: 365 KN-STKSFKCPYCPTDIDATRCRQLYF 389
           KN + ++FKCPYCP +  A+ CRQLYF
Sbjct: 368 KNCAFRTFKCPYCPAETLASACRQLYF 386

[Close]

BLAST of CSPI06G29440 vs. TAIR 10
Match: AT3G55070.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-23
Identity = 80/336 (23.81%), Postives = 155/336 (46.13%), Query Frame = 0


Query: 43  QLADNPECPIDMNSVFAALKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISK 102
           +LAD+     D  S    L T+L+ +    +LE      N    +    ++   + D+  
Sbjct: 79  ELADSDWSKDDTVSRLTCLVTRLQGLK--RKLEEGSNVENLQAQRCRARIDHLDSVDVEN 138

Query: 103 AYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAASL--RSPFQEMYQILES 162
                +++   + +I+  +  R   FE      ++  ES +   L     F+E  +++++
Sbjct: 139 I---TEWNNTKLKRILVDYMLRMSYFETA----TKLSESSNIMDLVDIDIFREAKKVIDA 198

Query: 163 MKSRNLEPALNWALNNSNKLKECGSDLLLKLHSMQFMEILQKGDRHD---ALKYARTYLA 222
           +K+R +  AL W  +N  +LK+  S    +L   +F+E+++         A++YAR +LA
Sbjct: 199 LKNREVASALTWCADNKTRLKKSKSKFEFQLRLQEFIELVRVDTAESYKKAIQYARKHLA 258

Query: 223 PLASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYES 282
              + HM ELQ ++A L +    +CS Y    L  +  WD + ++  ++FC   G + E 
Sbjct: 259 SWGTTHMKELQHVLATLAFKSTTECSKY--KVLFELRQWDVLVDQFKQEFCKLYGMTMEP 318

Query: 283 PLGVTVAAGVQGL-PPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKE 342
            L + + AG+  L  P               ++ ++L +P+   +  Q HS  VC +SKE
Sbjct: 319 LLNIYLQAGLSALKTPYGLEEGCTKEDPLSQENFRKLALPLPFSK--QHHSKLVCYISKE 378

Query: 343 QSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCP 373
               ENPP ++  G+V   +++ +M++ +     CP
Sbjct: 379 LMDTENPPQVLPNGYVYSTKALKEMAEKNGGKITCP 401

The following BLAST results are available for this feature:

BLAST of CSPI06G29440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T075	2.2e-128	59.69	Protein RMD5 homolog OS=Arabidopsis thaliana OX=3702 GN=RMD5 PE=1 SV=1	[more]
O59668	1.1e-52	32.98	LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 97...	[more]
Q640V2	2.1e-51	33.93	E3 ubiquitin-protein ligase RMND5A OS=Xenopus tropicalis OX=8364 GN=rmnd5a PE=2 ...	[more]
Q6GLP4	6.2e-51	31.76	E3 ubiquitin-protein ligase RMND5A OS=Xenopus laevis OX=8355 GN=rmnd5a PE=1 SV=1	[more]
Q9H871	1.1e-50	33.73	E3 ubiquitin-protein transferase RMND5A OS=Homo sapiens OX=9606 GN=RMND5A PE=1 S...	[more]

BLAST of CSPI06G29440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0U3	8.0e-219	98.45	protein RMD5 homolog A OS=Cucumis melo OX=3656 GN=LOC103484906 PE=4 SV=1	[more]
A0A5D3CLJ0	8.0e-219	98.45	Protein RMD5-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1BU35	3.5e-214	95.36	protein RMD5 homolog A-like OS=Momordica charantia OX=3673 GN=LOC111005703 PE=4 ...	[more]
A0A6J1HGI0	2.3e-213	95.62	protein RMD5 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463351 PE=4 SV=1	[more]
A0A6J1KU15	3.3e-212	95.10	protein RMD5 homolog OS=Cucurbita maxima OX=3661 GN=LOC111497206 PE=4 SV=1	[more]

BLAST of CSPI06G29440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143429.1	6.1e-221	99.74	protein RMD5 homolog [Cucumis sativus] >XP_031743696.1 protein RMD5 homolog [Cuc...	[more]
XP_008440495.1	1.7e-218	98.45	PREDICTED: protein RMD5 homolog A [Cucumis melo] >XP_008440496.1 PREDICTED: prot...	[more]
XP_038883497.1	5.9e-216	97.42	protein RMD5 homolog [Benincasa hispida] >XP_038883498.1 protein RMD5 homolog [B...	[more]
XP_022132999.1	7.2e-214	95.36	protein RMD5 homolog A-like [Momordica charantia] >XP_022133000.1 protein RMD5 h...	[more]
XP_022963019.1	4.7e-213	95.62	protein RMD5 homolog [Cucurbita moschata] >XP_022963020.1 protein RMD5 homolog [...	[more]

BLAST of CSPI06G29440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37880.1	1.5e-129	59.69	LisH/CRA/RING-U-box domains-containing protein	[more]
AT2G22690.1	5.3e-122	57.18	zinc ion binding	[more]
AT2G22690.2	5.3e-122	57.18	zinc ion binding	[more]
AT5G09630.1	5.7e-100	48.32	LisH/CRA/RING-U-box domains-containing protein	[more]
AT3G55070.1	2.5e-23	23.81	LisH/CRA/RING-U-box domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013144	CRA domain	SMART	SM00757	toby_final6	coord: 203..299 e-value: 1.5E-18 score: 77.6
IPR006595	CTLH, C-terminal LisH motif	SMART	SM00668	ctlh	coord: 150..207 e-value: 2.8E-8 score: 43.5
IPR006595	CTLH, C-terminal LisH motif	PROSITE	PS50897	CTLH	coord: 150..207 score: 11.253546
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 331..374 e-value: 8.0E-4 score: 28.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 331..374 score: 8.683004
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 110..142 e-value: 0.0025 score: 27.1
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 110..142 score: 9.32115
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 331..372 e-value: 2.0E-9 score: 37.3
IPR024964	CTLH/CRA C-terminal to LisH motif domain	PFAM	PF10607	CLTH	coord: 151..291 e-value: 4.9E-31 score: 107.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 321..387 e-value: 7.8E-9 score: 36.7
None	No IPR available	PANTHER	PTHR12170:SF11	PROTEIN RMD5 HOMOLOG	coord: 1..388
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 325..383
IPR045098	Fyv10 family	PANTHER	PTHR12170	MACROPHAGE ERYTHROBLAST ATTACHER-RELATED	coord: 1..388
IPR044063	Gid-type RING finger domain	PROSITE	PS51867	ZF_RING_GID	coord: 331..374 score: 13.15673
IPR037683	Rmd5, degenerated RING (dRING) finger	CDD	cd16652	dRing_Rmd5p_like	coord: 329..375 e-value: 1.21383E-28 score: 103.873

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G29440.1	CSPI06G29440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0034657	GID complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity