CSPI06G29250 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G29250
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Epidermal patterning factor-like protein
Location	Chr6: 25433673 .. 25434952 (+)
RNA-Seq Expression	CSPI06G29250
Synteny	CSPI06G29250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCATTGGCCTTCTTCTTTTTTCTCTTCTCTATCATCAATTATTTTTATTACAATTGCAAAATTTACAACCCCCTTTTCCCAGCAATTTTATTTTTCTGTTGGGTTATGGTTTCTGGAGGCTCTTCTTTCGAGTTCTGAACTTTTTGGTACTCTCTCTTTCTTTCTTTTTCTTTGTCTTCCACGTTCCATCATCTCAAATATCTCTCCCAGACTAACACAGATTCAGACCAAATTATATATATATTATATACACGTACGATCAGTATAGAGTGCAAATTCAGAAGCTAATCTCCATCCATTCTGATTTAACTCACACTTCATTCCTTCACCCATACTTTTTCTTTTTTGCTTTCTATCTGAGAACCTTTTTTTGCTTAGTTTTATTTTAAACCTCCTCTTCTCTAGGGAGAATTTCCCTGTCTCTTTCACATTCTGGCTTCTCTTTCTCTCTCTTTGTGAGAAGAAAAGGAAAAGGAAAAAGAAAAAGAAAAAAAAAATGGGGTGTGAGTGTATCAACAATGGCGTCATTGGCCGGCGCAGCAGGATAATCTTATGTCCGATTGTTTCTCTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGTAAATGGGTATCTTTTGAATTTTCAGAACAGAGTTCAAAACTATATTTTTATTCTTCAATTTCGTTTTTTGTTTAACCGAGTTGTTTTTCTTATCTTTGCAGGAAGATTTATTTCAAGGAACGGCAAGGTCAGTTCAGAAACCATCTCATTTCTTCCTTTCTCTAATGCTTTACTGTTTTTTTGTGAAAGCTTAATTGATTGAGAAGAATAATTTTGGGTCTTTTTTTTGGTGGATTGTTGGGATAGACAGTGAATAATAGTGAAGACAAAATGGTATTGAGAGGACAAATTGGGTCAAGGCCACCAAAATGTGAGAGAAGATGTAGTTGGTGTGGTCATTGTGAAGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGGAACTAAAAACTCCTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAATCCTTAAACACCCTTCCTCCACTAATCTCTTTCTCTGTAAATTAGTGATTATCATTATATATATGATTGTTAATTTCTTCAACTTAACATCTCCCATTTCTCCCTCACTCTCTCGTTTTAGTTAGATAACGAAGAGTACTATGATTGAATTGAACTTGGTTTCTTACTTCCA

mRNA sequence

ACCATTGGCCTTCTTCTTTTTTCTCTTCTCTATCATCAATTATTTTTATTACAATTGCAAAATTTACAACCCCCTTTTCCCAGCAATTTTATTTTTCTGTTGGGTTATGGTTTCTGGAGGCTCTTCTTTCGAGTTCTGAACTTTTTGGTACTCTCTCTTTCTTTCTTTTTCTTTGTCTTCCACGTTCCATCATCTCAAATATCTCTCCCAGACTAACACAGATTCAGACCAAATTATATATATATTATATACACGTACGATCAGTATAGAGTGCAAATTCAGAAGCTAATCTCCATCCATTCTGATTTAACTCACACTTCATTCCTTCACCCATACTTTTTCTTTTTTGCTTTCTATCTGAGAACCTTTTTTTGCTTAGTTTTATTTTAAACCTCCTCTTCTCTAGGGAGAATTTCCCTGTCTCTTTCACATTCTGGCTTCTCTTTCTCTCTCTTTGTGAGAAGAAAAGGAAAAGGAAAAAGAAAAAGAAAAAAAAAATGGGGTGTGAGTGTATCAACAATGGCGTCATTGGCCGGCGCAGCAGGATAATCTTATGTCCGATTGTTTCTCTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGAAGATTTATTTCAAGGAACGGCAAGACAGTGAATAATAGTGAAGACAAAATGGTATTGAGAGGACAAATTGGGTCAAGGCCACCAAAATGTGAGAGAAGATGTAGTTGGTGTGGTCATTGTGAAGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGGAACTAAAAACTCCTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAATCCTTAAACACCCTTCCTCCACTAATCTCTTTCTCTGTAAATTAGTGATTATCATTATATATATGATTGTTAATTTCTTCAACTTAACATCTCCCATTTCTCCCTCACTCTCTCGTTTTAGTTAGATAACGAAGAGTACTATGATTGAATTGAACTTGGTTTCTTACTTCCA

Coding sequence (CDS)

ATGGGGTGTGAGTGTATCAACAATGGCGTCATTGGCCGGCGCAGCAGGATAATCTTATGTCCGATTGTTTCTCTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGAAGATTTATTTCAAGGAACGGCAAGACAGTGAATAATAGTGAAGACAAAATGGTATTGAGAGGACAAATTGGGTCAAGGCCACCAAAATGTGAGAGAAGATGTAGTTGGTGTGGTCATTGTGAAGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGGAACTAAAAACTCCTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAATCCTTAA

Protein sequence

MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP*

Homology

[Close]

BLAST of CSPI06G29250 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-23
Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 25  LLFFLILASTQMRFMAEGRFISRNGK-TVNNSED-KMVLRGQIGSRPPKCER-RCSWCGH 84
           LL  LIL ST    MA GR    + + T +  +D KM++RG IGSRPP+CER RC  CGH
Sbjct: 11  LLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRCRSCGH 70

Query: 85  CEAIQVPANPQ-------KSGTKNSSTMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 132
           CEAIQVP NPQ        + + +SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 71  CEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]

BLAST of CSPI06G29250 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-09
Identity = 29/78 (37.18%), Postives = 39/78 (50.00%), Query Frame = 0


Query: 62  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTM--------KNIAYARDEAS 121
           + ++GS PP C  RC+ C  C AIQVP  P +S     +           ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 122 NYKPMSWKCKCGSLIFNP 132
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of CSPI06G29250 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 54  NSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEAS 113
           N E+ +  R +IGS+PP CE++C  C  CEAIQ P            T+ +I +     +
Sbjct: 46  NKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPHYA 104

Query: 114 NYKPMSWKCKC 125
           NY+P  W+C C
Sbjct: 106 NYQPEGWRCHC 104

[Close]

BLAST of CSPI06G29250 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.4e-04
Identity = 31/112 (27.68%), Postives = 48/112 (42.86%), Query Frame = 0


Query: 25  LLFFLILASTQMRFMAEG-----RFISRNGKTVNNSEDKMVLRGQIGSRPPKCERRCSWC 84
           LLFF   ++  ++  + G     + I+R+G      + K +  G  GS PP C  +C  C
Sbjct: 14  LLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRL--GGPGSVPPMCRLKCGKC 73

Query: 85  GHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP 132
             C+A+ VP  P                       Y P +W+CKCG+ +F P
Sbjct: 74  EPCKAVHVPIQP----------------GLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CSPI06G29250 vs. ExPASy TrEMBL
Match: A0A0A0KGK0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G497000 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.3e-71
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of CSPI06G29250 vs. ExPASy TrEMBL
Match: A0A5A7T4J5 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003700 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLIL STQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of CSPI06G29250 vs. ExPASy TrEMBL
Match: A0A1S3B1V9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484886 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLIL STQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of CSPI06G29250 vs. ExPASy TrEMBL
Match: A0A6J1HJ94 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463445 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.1e-53
Identity = 112/131 (85.50%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGVIG RSR ILC  VS LFFLILASTQMRFMAEGR IS++GKTV  SEDK+V
Sbjct: 55  MGCECNNNGVIG-RSR-ILCATVSFLFFLILASTQMRFMAEGRSISKSGKTV--SEDKVV 114

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK     SS MKNIAYARDEASNYKPMSW
Sbjct: 115 LRGQIGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSAMKNIAYARDEASNYKPMSW 174

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 175 KCKCGSLIFNP 176

[Close]

BLAST of CSPI06G29250 vs. ExPASy TrEMBL
Match: A0A6J1KNP8 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.8e-53
Identity = 110/131 (83.97%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGVIGR    ILC  VS LF LILASTQMRFMAEGR IS++GKTV  SEDK+V
Sbjct: 30  MGCECNNNGVIGRCR--ILCATVSFLFLLILASTQMRFMAEGRSISKSGKTV--SEDKVV 89

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK     SSTMKNIAYARDEASNYKPMSW
Sbjct: 90  LRGQIGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTMKNIAYARDEASNYKPMSW 149

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 150 KCKCGSLIFNP 151

[Close]

BLAST of CSPI06G29250 vs. NCBI nr
Match: XP_004143420.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 8.8e-71
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of CSPI06G29250 vs. NCBI nr
Match: XP_008440444.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo] >KAA0036385.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa] >TYK12781.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 2.6e-70
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLIL STQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of CSPI06G29250 vs. NCBI nr
Match: XP_038882800.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 240.0 bits (611), Expect = 1.2e-59
Identity = 119/131 (90.84%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGV+G RSR ILC  VSLLFFLILASTQMRFMAEGR ISRNGKTVN+ EDK+V
Sbjct: 1   MGCEC-NNGVMGSRSR-ILCSTVSLLFFLILASTQMRFMAEGRLISRNGKTVND-EDKVV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS  KNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSAIKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 128

[Close]

BLAST of CSPI06G29250 vs. NCBI nr
Match: XP_038882801.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 115/131 (87.79%), Postives = 117/131 (89.31%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGV+G RSR ILC  VSLLFFLILASTQMRFMAEGR ISRN     N EDK+V
Sbjct: 1   MGCEC-NNGVMGSRSR-ILCSTVSLLFFLILASTQMRFMAEGRLISRN----VNDEDKVV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS  KNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSAIKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 125

[Close]

BLAST of CSPI06G29250 vs. NCBI nr
Match: XP_022963149.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata])

HSP 1 Score: 217.6 bits (553), Expect = 6.3e-53
Identity = 112/131 (85.50%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGVIG RSR ILC  VS LFFLILASTQMRFMAEGR IS++GKTV  SEDK+V
Sbjct: 55  MGCECNNNGVIG-RSR-ILCATVSFLFFLILASTQMRFMAEGRSISKSGKTV--SEDKVV 114

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK     SS MKNIAYARDEASNYKPMSW
Sbjct: 115 LRGQIGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSAMKNIAYARDEASNYKPMSW 174

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 175 KCKCGSLIFNP 176

[Close]

BLAST of CSPI06G29250 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-24
Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 25  LLFFLILASTQMRFMAEGRFISRNGK-TVNNSED-KMVLRGQIGSRPPKCER-RCSWCGH 84
           LL  LIL ST    MA GR    + + T +  +D KM++RG IGSRPP+CER RC  CGH
Sbjct: 11  LLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRCRSCGH 70

Query: 85  CEAIQVPANPQ-------KSGTKNSSTMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 132
           CEAIQVP NPQ        + + +SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 71  CEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]

BLAST of CSPI06G29250 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 1.9e-10
Identity = 29/78 (37.18%), Postives = 39/78 (50.00%), Query Frame = 0


Query: 62  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTM--------KNIAYARDEAS 121
           + ++GS PP C  RC+ C  C AIQVP  P +S     +           ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 122 NYKPMSWKCKCGSLIFNP 132
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of CSPI06G29250 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08
Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 54  NSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEAS 113
           N E+ +  R +IGS+PP CE++C  C  CEAIQ P            T+ +I +     +
Sbjct: 46  NKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPHYA 104

Query: 114 NYKPMSWKCKC 125
           NY+P  W+C C
Sbjct: 106 NYQPEGWRCHC 104

[Close]

BLAST of CSPI06G29250 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07
Identity = 38/125 (30.40%), Postives = 52/125 (41.60%), Query Frame = 0


Query: 9   GVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFI-SRNGKTVNNSEDKMVLR-GQIG 68
           G   RR R +L  +V+    L L S      A+GR+I  R G  +     +   R G  G
Sbjct: 2   GTFRRRRRFLLAALVTFA-LLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRFGGPG 61

Query: 69  SRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGS 128
           S PP C  +C  C  C+ + VP  P  S                    Y P +W+CKCG+
Sbjct: 62  SSPPTCRSKCGKCQPCKPVHVPIQPGLS----------------MPLEYYPEAWRCKCGN 109

Query: 129 LIFNP 132
            +F P
Sbjct: 122 KLFMP 109

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BLAST of CSPI06G29250 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 45.1 bits (105), Expect = 5.2e-05
Identity = 31/112 (27.68%), Postives = 48/112 (42.86%), Query Frame = 0


Query: 25  LLFFLILASTQMRFMAEG-----RFISRNGKTVNNSEDKMVLRGQIGSRPPKCERRCSWC 84
           LLFF   ++  ++  + G     + I+R+G      + K +  G  GS PP C  +C  C
Sbjct: 14  LLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRL--GGPGSVPPMCRLKCGKC 73

Query: 85  GHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP 132
             C+A+ VP  P                       Y P +W+CKCG+ +F P
Sbjct: 74  EPCKAVHVPIQP----------------GLIMPLEYYPEAWRCKCGNKLFMP 107

The following BLAST results are available for this feature:

BLAST of CSPI06G29250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T068	4.2e-23	51.69	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LFT5	2.6e-09	37.18	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
C4B8C4	1.4e-07	36.62	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	7.4e-04	27.68	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of CSPI06G29250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGK0	4.3e-71	100.00	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G497...	[more]
A0A5A7T4J5	1.2e-70	99.24	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B1V9	1.2e-70	99.24	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484886...	[more]
A0A6J1HJ94	3.1e-53	85.50	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KNP8	6.8e-53	83.97	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of CSPI06G29250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143420.1	8.8e-71	100.00	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus]	[more]
XP_008440444.1	2.6e-70	99.24	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo] >KAA0036385...	[more]
XP_038882800.1	1.2e-59	90.84	EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Benincasa hispida]	[more]
XP_038882801.1	1.6e-56	87.79	EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Benincasa hispida]	[more]
XP_022963149.1	6.3e-53	85.50	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]	[more]

BLAST of CSPI06G29250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37810.1	3.0e-24	51.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G10310.1	1.9e-10	37.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13898.1	1.0e-08	36.62	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT4G14723.1	1.9e-07	30.40	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	5.2e-05	27.68	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 64..131 e-value: 5.6E-17 score: 61.5
None	No IPR available	PANTHER	PTHR33109:SF71	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2	coord: 7..131
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 7..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G29250.1	CSPI06G29250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane