CSPI06G29130 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G29130
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 25309439 .. 25309754 (-)
RNA-Seq ExpressionCSPI06G29130
SyntenyCSPI06G29130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTTGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATTGAGTGTTGAAAAAGGAAGAAGAAAAATGGGTTAAGGGAGAGGGTGAGTTCTGAGTTTGGCAGACAGGAGACACTTCTGTGGGCTGTCAAGCAGGCAGAATTCATCAACATGGGCCATACTTCACCAACCTGGACCCCTCTT

mRNA sequence

ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTTGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGAGACACTTCTGTGGGCTGTCAAGCAGGCAGAATTCATCAACATGGGCCATACTTCACCAACCTGGACCCCTCTT

Coding sequence (CDS)

ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTTGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGAGACACTTCTGTGGGCTGTCAAGCAGGCAGAATTCATCAACATGGGCCATACTTCACCAACCTGGACCCCTCTT

Protein sequence

MEEGGGGDRWESGVALDRDIGRVCCCVWLQRKEKNVRMFKVVEIGISICNCMETLLWAVKQAEFINMGHTSPTWTPL
Homology
[Close]
BLAST of CSPI06G29130 vs. ExPASy TrEMBL
Match: A0A0A0KIK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495880 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 1  MEEGGGGDRWESGVALDRDIGRVCCCVWLQRKEKNVRMFKVVEIGISICNCM 53
          MEEGGGGDRWESGVALDRDIGRVC CVWLQRKEKNVRMFKVVEIGISICNCM
Sbjct: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCM 52

[Close]
BLAST of CSPI06G29130 vs. NCBI nr
Match: KGN48634.1 (hypothetical protein Csa_004371 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 2.2e-21
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 1  MEEGGGGDRWESGVALDRDIGRVCCCVWLQRKEKNVRMFKVVEIGISICNCM 53
          MEEGGGGDRWESGVALDRDIGRVC CVWLQRKEKNVRMFKVVEIGISICNCM
Sbjct: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCM 52

The following BLAST results are available for this feature:
BLAST of CSPI06G29130 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G29130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIK41.1e-2198.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495880 PE=4 SV=1[more]
BLAST of CSPI06G29130 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48634.12.2e-2198.08hypothetical protein Csa_004371 [Cucumis sativus][more]
BLAST of CSPI06G29130 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G29130.1CSPI06G29130.1mRNA