CSPI06G29000 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G29000
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Cyclin-D1-1-like
Location	Chr6: 25224722 .. 25227914 (-)
RNA-Seq Expression	CSPI06G29000
Synteny	CSPI06G29000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTACCTTCTCTATCTCCCTCTCTCAAATTTTCAGAAAAAAATAAAATAAAATCAGAAATTATTTTTCCTTCTTCTTCTTCCTCTGTCTCTGAATTTGTTTCGTATAATAATTTCTTCTTCTTATTGTTTTGTTGGTGTGCTTTAATCGTTTAAGTGTGTGATCTGGAAAACGTCACGTCCTTTTGTTCAGAATTGAGATTCTTGACGTGCATCGTGTAGAGAGCAATCAAAGAAAGGCGTCAGACTCATTTACTCGTGTGTATAGTCTGTGATTAATTAATTTTTATATATATATCTATATATATATATATATATAGCTTAAGATTAAGCTTCTACTTCAAAAACAATTAAGGCCAACTTCCCCAACGCACGCGACCCACACGCGCACTTGGGATTCTTGAGTTGAAGGATTTGGTTTAGAGATAGGGAGGTAATGGGGAACTGTCAGGCGGCGGAGGCAGCGACGGTGGTGATTCAACACCCTGGTAATCAAAAGATCGAGAGGATTTATTGGTCTGTAAGTGCACACGAGATCATGAACTCTAACCCTGGCCATTACGTTGCTCTCCTTATCACTTCCTCTACTATGAAGTCCGAAAATGGAACTCCCATCAAACAGCTCAAGCTCCTCCGCCCTGACGACACGCTTCTCATCGGCCACGTCTATCGCCTTATCACTTTCGAAGGTATTTTTCTTTTTCTTTATTTTTAACAATTATATTATACACGCACACACTTACTTTTCTCGCAATGCAACAATAGAACAAGTACATTGGTTAAATAGTTTTTTAATAAATATTCTTAAAGTTGGAAGAAGAAAAACAAAACTTTAGTGCATGTCACAGGCTTTACTCATCTTTTATGCAATCTAGACAATATCGGATAAAAATATGTCATACGTACAGTAGGTTTTTTTTCCTAAAGATTTCTTTTATCATGTGTAAAAAAAGATGCAGCAATAAGGAAAAAAACTATGCTGCGCCTAATAATTACTCTTAAATTTAAAGGGATGTTCATTACTAAACACAATGATGAATCTGATCATATGATTCGCCTATCTCTATTTTTTTTACTACTCTCGCATATCTTTATCCTTGATATGCCGACCACACAGTTGAATTATACTTAAAAGTAAGCTATTTTGTTAAGAGTTCGAAATATAAATGAATGATTTTATTTTAAACTTATATAAAAATGGTCCTCTCTTTAATATAATATAAGGAGATAGTGAGATGGAACTTCCCAAGTAATATAATATAAGGAGATGGTGAGATCAAACTTATCAGCTTCAAAGTTAAAAGTGTTTTCTGTTATAGTTGAGTTGGACTTATTTAAACAAATAAAACGGTTATTAGAGAGACTGGAGTGGGTTGCTAACTAAATTTAATGTGTGTATTGTGTGCTAAATTGGGAATTTTCTTTCCTCTTTCAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGAAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATAAAGGGCTCAGATTCTGGTTCAAATCCGAATGCTAATTCTAAATCCCAAAATTACATGAAGGTAATCAAATACCTCATAACCCTTAATCATGCTCCAAATCCCAAAAGGGGATTTTTCCTTTTCTTTTCTTAAAAAATCCATTGGTTGGGGGTAAATATCGCGATTTATTGAATTTCGCTTTTCATGATTACACTCTGATTAAAGCCAAGAAATAAAAGAAAAAACAAAAAGTTGTTTTTTCTGAATAAAGAAGCATCTGAAATTGGTTTGAAATTTAAGGCCACAAATATCGAGGGAAAAGGCTTTTTATGGGTCACCTCATGAATCTTGTCAGGAATTGAAGTAGAGCTGTACACACCAGCGGTATTCAATTTTTATATCATCTTCAACTCAGATATATTCACTCAACCCAGTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAATAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAATGAAAAAAAGTTCAACTTCATTATAAATTAAGGATTAAAAAAATGATAATAAATAAAAGGGGAAATTTCTTTTATCAGCTTTCGCAAGCATTCTCTGCATGCTGTCTTATAGATTTAGAAAGGAAGAAAAAAAAAGTTTGCTTAACTTAAAAGTTGAATTAATTATTCAGGGGACCAAATCATAATGGGGTTTGCCTGTATATTGAAACTAACTCATTTTCAATTTGAGTTCCATTTCCCACAGACTTCATCAACAATTTTATATTGAAATCTAGAGGTTTTAACTCTTGAGAACGTTTACAAGTGACCCTCTTTAAAAAAAAAAAAAAGGACAATGATTGAATACAATTTGTCCATTGAAAAAAGTCAAAATTTCTTGTTATTTTGAAAAACTGGAGTATGCAAAGATATAGGTGCAACACAACCAATCAACACTCTAATACTTTTTCTTTTCAAAACAACACTTTCTAGCTCCTTTCTCCTTTCTCTCTTTTGCTGATATATATATTAAAAAGAAAAAAAAATCTAAATAACATGGCCTTTTCTTTGATCATAATCATAAAGTAGAAAGATATTTATTTGCTTGCTCTTTACAAAGTCGACAACCAATATCTTCAAATGAACGTGAACAATCCTACTTTTTGATAATTGGAGTCAAATCAAAACATTATGCTAAAATAATGATATTTTCTCAGCCGGAGCAGGATGCCGAACACCGCCTCGAAAACAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGACAGAGAGGTATGGGAAGACATTATGGTGGTGGAAGTCAATGGAGGCCAGCCTTACAAAGCATTGCAGAAATTGGAATTAATTGAAAAGGAAAAAAGGGAAAGGGAAAGGGAAAGGCAATATATGAACAAAAACCAAAACAAAAAAATTGGCCTTTCGCTTTCATGATCTTCAATGAATAATTACTACAAGAAGTTAACGTCAAAATCTCAATCTTTATCTTTTATATATACCTCTTTTTATATTTTTCTATTTATTATTTAGATACGTCTCTTTGTGTATTTGCAGTAGTACTTTTATTACTTCTTTCTATCTAATTTTAAATTAGTGTACGGAACTTCATTAGTTGAGGTGCTTTAGTTTTCTTTTTTAAATGTAAATTATTGGCAATTACTTT

mRNA sequence

CTTTACCTTCTCTATCTCCCTCTCTCAAATTTTCAGAAAAAAATAAAATAAAATCAGAAATTATTTTTCCTTCTTCTTCTTCCTCTGTCTCTGAATTTGTTTCGTATAATAATTTCTTCTTCTTATTGTTTTGTTGGTGTGCTTTAATCGTTTAAGTGTGTGATCTGGAAAACGTCACGTCCTTTTGTTCAGAATTGAGATTCTTGACGTGCATCGTGTAGAGAGCAATCAAAGAAAGGCGTCAGACTCATTTACTCGTGTGTATAGTCTGTGATTAATTAATTTTTATATATATATCTATATATATATATATATATAGCTTAAGATTAAGCTTCTACTTCAAAAACAATTAAGGCCAACTTCCCCAACGCACGCGACCCACACGCGCACTTGGGATTCTTGAGTTGAAGGATTTGGTTTAGAGATAGGGAGGTAATGGGGAACTGTCAGGCGGCGGAGGCAGCGACGGTGGTGATTCAACACCCTGGTAATCAAAAGATCGAGAGGATTTATTGGTCTGTAAGTGCACACGAGATCATGAACTCTAACCCTGGCCATTACGTTGCTCTCCTTATCACTTCCTCTACTATGAAGTCCGAAAATGGAACTCCCATCAAACAGCTCAAGCTCCTCCGCCCTGACGACACGCTTCTCATCGGCCACGTCTATCGCCTTATCACTTTCGAAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGAAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATAAAGGGCTCAGATTCTGGTTCAAATCCGAATGCTAATTCTAAATCCCAAAATTACATGAAGCCGGAGCAGGATGCCGAACACCGCCTCGAAAACAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGACAGAGAGGTATGGGAAGACATTATGGTGGTGGAAGTCAATGGAGGCCAGCCTTACAAAGCATTGCAGAAATTGGAATTAATTGAAAAGGAAAAAAGGGAAAGGGAAAGGGAAAGGCAATATATGAACAAAAACCAAAACAAAAAAATTGGCCTTTCGCTTTCATGATCTTCAATGAATAATTACTACAAGAAGTTAACGTCAAAATCTCAATCTTTATCTTTTATATATACCTCTTTTTATATTTTTCTATTTATTATTTAGATACGTCTCTTTGTGTATTTGCAGTAGTACTTTTATTACTTCTTTCTATCTAATTTTAAATTAGTGTACGGAACTTCATTAGTTGAGGTGCTTTAGTTTTCTTTTTTAAATGTAAATTATTGGCAATTACTTT

Coding sequence (CDS)

ATGGGGAACTGTCAGGCGGCGGAGGCAGCGACGGTGGTGATTCAACACCCTGGTAATCAAAAGATCGAGAGGATTTATTGGTCTGTAAGTGCACACGAGATCATGAACTCTAACCCTGGCCATTACGTTGCTCTCCTTATCACTTCCTCTACTATGAAGTCCGAAAATGGAACTCCCATCAAACAGCTCAAGCTCCTCCGCCCTGACGACACGCTTCTCATCGGCCACGTCTATCGCCTTATCACTTTCGAAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGAAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATAAAGGGCTCAGATTCTGGTTCAAATCCGAATGCTAATTCTAAATCCCAAAATTACATGAAGCCGGAGCAGGATGCCGAACACCGCCTCGAAAACAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGACAGAGAGGTATGGGAAGACATTATGGTGGTGGAAGTCAATGGAGGCCAGCCTTACAAAGCATTGCAGAAATTGGAATTAATTGA

Protein sequence

MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPIKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSGSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIAEIGIN*

Homology

[Close]

BLAST of CSPI06G29000 vs. ExPASy TrEMBL
Match: A0A0A0KLJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495750 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.1e-96
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120

Query: 121 SNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIAEI 180
           SNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIAEI
Sbjct: 121 SNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIAEI 180

Query: 181 GIN 184
           GIN
Sbjct: 181 GIN 183

[Close]

BLAST of CSPI06G29000 vs. ExPASy TrEMBL
Match: A0A1S4DTC0 (uncharacterized protein LOC103484864 OS=Cucumis melo OX=3656 GN=LOC103484864 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.2e-93
Identity = 180/185 (97.30%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSST+KSENGTPI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTLKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120

Query: 121 SNPNANSKSQNYMK--PEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIA 180
           SNPNANSKSQNYMK  PEQ+AEHRLENS+AGSSGGGRGQRGMGRHYGGGSQWRPALQSIA
Sbjct: 121 SNPNANSKSQNYMKSQPEQNAEHRLENSDAGSSGGGRGQRGMGRHYGGGSQWRPALQSIA 180

Query: 181 EIGIN 184
           EIGIN
Sbjct: 181 EIGIN 185

[Close]

BLAST of CSPI06G29000 vs. ExPASy TrEMBL
Match: A0A6J1KWE0 (uncharacterized protein LOC111497021 OS=Cucurbita maxima OX=3661 GN=LOC111497021 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.3e-80
Identity = 157/187 (83.96%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTP 60
           MGNCQAAEAATVVIQHPG N +IERIYWSVSAH+IMNSNPGHYVAL++TSST+K++NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPGINPRIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120
           IK LKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMK K +DS
Sbjct: 61  IKHLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKKKDTDS 120

Query: 121 GSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGR---GQRGMGRHYGGGSQWRPALQS 180
            SNPN+NSKSQNYMK EQ+   RLEN +AGSS GGR   G RGMGRHYGGG QWRPALQS
Sbjct: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSSSGGRGGGGHRGMGRHYGGGGQWRPALQS 180

Query: 181 IAEIGIN 184
           IAE+GIN
Sbjct: 181 IAEVGIN 187

[Close]

BLAST of CSPI06G29000 vs. ExPASy TrEMBL
Match: A0A6J1HGV9 (uncharacterized protein LOC111463436 OS=Cucurbita moschata OX=3662 GN=LOC111463436 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.0e-80
Identity = 157/187 (83.96%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTP 60
           MGNCQAAEAATVVIQHPG N KIERIYWSVSAH+IMNSNPGHYVAL++TSST+K++NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120
           IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMKI  ++S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120

Query: 121 GSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGR---GQRGMGRHYGGGSQWRPALQS 180
            SNPN+NSKSQNYMK EQ+   RLEN +AGS  GGR   G RGMGRHYGGG QWRPALQS
Sbjct: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPALQS 180

Query: 181 IAEIGIN 184
           IAE+GIN
Sbjct: 181 IAEVGIN 187

[Close]

BLAST of CSPI06G29000 vs. ExPASy TrEMBL
Match: A0A6J1ISD6 (uncharacterized protein LOC111477989 OS=Cucurbita maxima OX=3661 GN=LOC111477989 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.5e-74
Identity = 151/183 (82.51%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVI HPGN KIERIYWSVSAHEIMNSNPGHYVALL+TSST  S+NG PI
Sbjct: 1   MGNCQAAEAATVVIHHPGNHKIERIYWSVSAHEIMNSNPGHYVALLLTSSTFNSQNGNPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120
           KQLKLLRPDDTLLIGHVYRLI+FEDVLKEFAAKKCVKLGKLL+EGGALSVGMKIK SDS 
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLISFEDVLKEFAAKKCVKLGKLLREGGALSVGMKIKPSDSA 120

Query: 121 SNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIAEI 180
           SN      SQN+ KPE+    RLE+SNAG SGGG GQR MG+HYGGG QWRPALQSI E 
Sbjct: 121 SN-----SSQNHRKPER----RLESSNAGGSGGGGGQRSMGKHYGGGCQWRPALQSIEEF 174

Query: 181 GIN 184
           GIN
Sbjct: 181 GIN 174

[Close]

BLAST of CSPI06G29000 vs. NCBI nr
Match: XP_004141857.1 (uncharacterized protein LOC101222947 [Cucumis sativus] >KGN48621.1 hypothetical protein Csa_004276 [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 6.4e-96
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120

Query: 121 SNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIAEI 180
           SNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIAEI
Sbjct: 121 SNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIAEI 180

Query: 181 GIN 184
           GIN
Sbjct: 181 GIN 183

[Close]

BLAST of CSPI06G29000 vs. NCBI nr
Match: XP_016899236.1 (PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 6.7e-93
Identity = 180/185 (97.30%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSST+KSENGTPI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTLKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120

Query: 121 SNPNANSKSQNYMK--PEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIA 180
           SNPNANSKSQNYMK  PEQ+AEHRLENS+AGSSGGGRGQRGMGRHYGGGSQWRPALQSIA
Sbjct: 121 SNPNANSKSQNYMKSQPEQNAEHRLENSDAGSSGGGRGQRGMGRHYGGGSQWRPALQSIA 180

Query: 181 EIGIN 184
           EIGIN
Sbjct: 181 EIGIN 185

[Close]

BLAST of CSPI06G29000 vs. NCBI nr
Match: XP_038883937.1 (uncharacterized protein LOC120074768 [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 4.3e-84
Identity = 171/187 (91.44%), Postives = 174/187 (93.05%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALL+TSST K+ENGTPI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTTKTENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSD-S 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSD S
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDNS 120

Query: 121 GSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGR---GQRGMGRHYGGGSQWRPALQS 180
            SNPNANSKSQNYMKPEQD       S+AGSSGGGR   GQRGMGRHYGGGSQWRPALQS
Sbjct: 121 ASNPNANSKSQNYMKPEQDG----GRSDAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQS 180

Query: 181 IAEIGIN 184
           IAEIGIN
Sbjct: 181 IAEIGIN 183

[Close]

BLAST of CSPI06G29000 vs. NCBI nr
Match: XP_023003398.1 (uncharacterized protein LOC111497021 [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 1.1e-79
Identity = 157/187 (83.96%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTP 60
           MGNCQAAEAATVVIQHPG N +IERIYWSVSAH+IMNSNPGHYVAL++TSST+K++NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPGINPRIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120
           IK LKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMK K +DS
Sbjct: 61  IKHLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKKKDTDS 120

Query: 121 GSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGR---GQRGMGRHYGGGSQWRPALQS 180
            SNPN+NSKSQNYMK EQ+   RLEN +AGSS GGR   G RGMGRHYGGG QWRPALQS
Sbjct: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSSSGGRGGGGHRGMGRHYGGGGQWRPALQS 180

Query: 181 IAEIGIN 184
           IAE+GIN
Sbjct: 181 IAEVGIN 187

[Close]

BLAST of CSPI06G29000 vs. NCBI nr
Match: XP_022963138.1 (uncharacterized protein LOC111463436 [Cucurbita moschata])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 157/187 (83.96%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTP 60
           MGNCQAAEAATVVIQHPG N KIERIYWSVSAH+IMNSNPGHYVAL++TSST+K++NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120
           IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMKI  ++S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120

Query: 121 GSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGR---GQRGMGRHYGGGSQWRPALQS 180
            SNPN+NSKSQNYMK EQ+   RLEN +AGS  GGR   G RGMGRHYGGG QWRPALQS
Sbjct: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPALQS 180

Query: 181 IAEIGIN 184
           IAE+GIN
Sbjct: 181 IAEVGIN 187

[Close]

BLAST of CSPI06G29000 vs. TAIR 10
Match: AT5G67620.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: microtubule; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 194.5 bits (493), Expect = 7.4e-50
Identity = 111/192 (57.81%), Postives = 130/192 (67.71%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAATV+I HP   K+ERIYWSV+A +IM SNPGHYVA+++TS TMK+E G P+
Sbjct: 1   MGNCQAAEAATVLIHHPAENKVERIYWSVTASDIMKSNPGHYVAVVVTSPTMKNEKGLPL 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSV--------GM 120
           KQLKLLRPDDTLLIGHVYRL++FE+VL EFA KKCVKLGKLLKEGG L +          
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLVSFEEVLNEFATKKCVKLGKLLKEGGGLDLTKKKTKHRKK 120

Query: 121 KIKGSDSGSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGG---RGQRGMGRHYGGGSQ 180
           K+       NPN++        P QD     +N+ AG +GG    R   G GR   GG  
Sbjct: 121 KLDQETGKVNPNSDP------NPNQDG---ADNAVAGENGGDGFMRRSHGGGR---GGGG 180

Query: 181 WRPALQSIAEIG 182
           WRPAL SI E G
Sbjct: 181 WRPALHSIPEFG 180

[Close]

BLAST of CSPI06G29000 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-22
Identity = 72/186 (38.71%), Postives = 104/186 (55.91%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITS---STMKSENG 60
           MGNCQA + A VVIQHP N K E++   VSA  +M  NPGH V+LLI++   S+  S +G
Sbjct: 1   MGNCQAVDTARVVIQHP-NGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHG 60

Query: 61  TPIK--QLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIK 120
            P++  ++KLLRP DTL++GHVYRLIT ++V+K   AKKC KL K  K         K++
Sbjct: 61  GPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSDD-----KLE 120

Query: 121 GSDSGSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQ 180
              + ++   +++ Q  MK ++    R+  S                       W+P+LQ
Sbjct: 121 MVKAINSTKLDNEDQLQMKKQEKERSRISRS-----------------------WQPSLQ 157

Query: 181 SIAEIG 182
           SI+E G
Sbjct: 181 SISEGG 157

[Close]

BLAST of CSPI06G29000 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-22
Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITS---STMKSENG 60
           MGNCQA + A VVIQHP N K E++   VSA  +M  NPGH V+LLI++   S+  S +G
Sbjct: 1   MGNCQAVDTARVVIQHP-NGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHG 60

Query: 61  TPIK--QLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGK 101
            P++  ++KLLRP DTL++GHVYRLIT ++V+K   AKKC KL K
Sbjct: 61  GPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKK 104

[Close]

BLAST of CSPI06G29000 vs. TAIR 10
Match: AT5G62900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.4 bits (254), Expect = 3.9e-22
Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60
           MGNCQAAEAAT VIQ P  + + R Y +V+A E++ S+PGH+VALL+ SS +       +
Sbjct: 1   MGNCQAAEAATTVIQQPDGKSV-RFYCTVNASEVIKSHPGHHVALLL-SSAVPHGGSLRV 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120
            ++KLLRP D LL+GHVYRLI+ E+V+K   AKK    GK+ K  G  SV      ++  
Sbjct: 61  TRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKS---GKMKKIHGEFSV------AEEE 120

Query: 121 SNP-NANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGSQWRPALQSIAE 180
            NP    S+S +    ++D + R+           RG    G        W+P+LQSI+E
Sbjct: 121 INPLTLRSESAS----DKDTQRRIHEKQ-------RGMMNTGGATNKVRAWQPSLQSISE 158

[Close]

BLAST of CSPI06G29000 vs. TAIR 10
Match: AT1G60010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 6.1e-20
Identity = 71/191 (37.17%), Postives = 96/191 (50.26%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLI-----------TS 60
           MGNCQA +AA +V+QHP + KI+R Y  VS  EIM   PGHYV+L+I           T+
Sbjct: 1   MGNCQAVDAAALVLQHP-DGKIDRYYGPVSVSEIMRMYPGHYVSLIIPLPEKNIPATTTT 60

Query: 61  STMKSENG-TPIKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGAL 120
           +  KSE       ++KLLRP + L++GH YRLIT ++V+K   AKK  K  K   E    
Sbjct: 61  TDDKSERKVVRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAKKYAKTKKHQSE---- 120

Query: 121 SVGMKIKGSDSGSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRGQRGMGRHYGGGS 180
           +   K K S        + K+QN    ++     L NS +  S                 
Sbjct: 121 TSKEKKKPSSEKKIDEESDKNQNLETKDEKQRSVLTNSASSRS----------------K 170

The following BLAST results are available for this feature:

BLAST of CSPI06G29000 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G29000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLJ3	3.1e-96	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495750 PE=4 SV=1	[more]
A0A1S4DTC0	3.2e-93	97.30	uncharacterized protein LOC103484864 OS=Cucumis melo OX=3656 GN=LOC103484864 PE=...	[more]
A0A6J1KWE0	5.3e-80	83.96	uncharacterized protein LOC111497021 OS=Cucurbita maxima OX=3661 GN=LOC111497021...	[more]
A0A6J1HGV9	7.0e-80	83.96	uncharacterized protein LOC111463436 OS=Cucurbita moschata OX=3662 GN=LOC1114634...	[more]
A0A6J1ISD6	1.5e-74	82.51	uncharacterized protein LOC111477989 OS=Cucurbita maxima OX=3661 GN=LOC111477989...	[more]

BLAST of CSPI06G29000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141857.1	6.4e-96	100.00	uncharacterized protein LOC101222947 [Cucumis sativus] >KGN48621.1 hypothetical ...	[more]
XP_016899236.1	6.7e-93	97.30	PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo]	[more]
XP_038883937.1	4.3e-84	91.44	uncharacterized protein LOC120074768 [Benincasa hispida]	[more]
XP_023003398.1	1.1e-79	83.96	uncharacterized protein LOC111497021 [Cucurbita maxima]	[more]
XP_022963138.1	1.4e-79	83.96	uncharacterized protein LOC111463436 [Cucurbita moschata]	[more]

BLAST of CSPI06G29000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67620.1	7.4e-50	57.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50090.1	1.0e-22	38.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50090.2	2.9e-22	54.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G62900.1	3.9e-22	40.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G60010.1	6.1e-20	37.17	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..179 e-value: 3.1E-30 score: 105.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..169
None	No IPR available	PANTHER	PTHR33413:SF1	EXPRESSED PROTEIN	coord: 1..180
None	No IPR available	PANTHER	PTHR33413	EXPRESSED PROTEIN	coord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G29000.1	CSPI06G29000.1	mRNA