CSPI06G28940 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G28940
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr6: 25193557 .. 25198794 (+)
RNA-Seq ExpressionCSPI06G28940
SyntenyCSPI06G28940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTGCTTCCGGAAATGGAAGCTTTGAACTCAAATACACCAATTCCTTCACCAAAATTTGAACCAGATACCGATAAAATTAAGCGAATGCTTCTCCAGAAGGGTGTTTATCCCACTCCCAGAATTGTCCGCTCACTCCGCAAGAAAGAAATCCAGAAGTACAATCGCAAACTCAAGCGAGTGGCCGAACGACAATCCGCTCAGTCGCCACCTCTTTCTGAGTCCCAAAAGCAACTTATCGCCGAGGAAACTCATTTTCTGACGTTGAGAAGCGAGTACAAGGAGTTCTCGAAGGCCATTGAGGCAAAACCAGCCGGTGGTTTGATGGTCGGGAGGCCTTGGGAGAGACTGGAAAGAGTTAATTTTAAAGAACTTACGGGTGTTAGAACGGGATACAATCGGGATAGTCTGAAGAAGGAGAGTTTGAGAGAATTGAGGAAGCTGTTTGAGACTCGTAAGCTCGAGGAATCGCAGTGGGCTTTGGATGACGACGTGGAACTGAAGGAAGAGTGGTTGGAGAGTGAAAATGATCGATATGACGTCGTGAAACGGAGGCGTGGCGACGGAGAGGTTATTCGCTTCCTTGTTGACAGGTTTGTATAGGTCGAATTCGGTTGGACGACTATGAAGTTTCGATAACTCAAGACAGCAACATTACTATTTTCAGGCTAAGTTCGGGACCAATTTCAATGAGAGATTGGAAATTCTCGAGGATGATGATACGGTCAGGCTTGCAGTTCAATGAAGGTCAACTACTTAAAATTCTGGACGCCCTTGGTGCTAAGGGATGTTGGAAACAGGCCTTATCAGTGGTTGAGTGGGTATACAATCTGAAAAGTCATAGTCATTCTAAAAGCAGGTAAGATATTTAATCCATACTGAATTACATATGTAAACAATTATAATGGTGAATGTTGTCTGTTACCTTCTTTGTTGGAAATTTCCTCAAGTTTGATTAATTGCTATTCATACATGTGTTTGATCAATGTATTAATTTTATTTTTTAGTTCCCTCATGAAGTACGTGTTTTTCTGTAGTTAAATAAGTTGTGCATTTTGCAGGTTTGTCTATACAAAGCTTTTAGCTGTTCTTGGGATGGCAAGGAAACCACAGGAAGCCCTTCAGATATTTAATTTGATGAGGGTAATGTTGTAGTGCCTTTGTTCTTCCATATTCAAAAAATATTTTTCAATATGTGTGTGATGTTGTTAGATATGTTATAGTTACCTTATTCAGGGAGACGGCCAGATATATCCTGATATGGCTGCATATCACAGTATAGCTGTTACGCTAGGTCAAGCTGGCCTCTTGAAACAATTGCTGAAAGTTATTGAATTCATGAGGCAGCAACCATCTAAAAAAGTTAGAAACAAGTGCCGCAAATCTTGGGATCCTGCAGTTGAACCCGACCTTGTTATATATAATGCTGTAAGAGATCATATTTATCTAGCATCTTGACACGTTTTTATATTTTTCAGTAATATGTTTTTAGTGTGGAAAAAGTACTTGATATCCATGCTATGTCCTACAATATAGTAGAAGTTGCTAATCCCCTCCAAAATTATTGCTAGATTTTGAACGCATGCATTCCCACCCTTGAGTGGAAAGGTGTCTACTGGGTGTTCACACAATTGAGAAAGAGTGGTTTGAGACCTAATGGAGCAACATATGGACTTTCTATGGAGGTACCTGCTAAATCCTATTTTTGAATAGTTGAACTGAAATTCCTGTTTTTTTTTTTTTTTTTGTGTGTGTGTTTAAATGGAGTGTACTCATGGTGATGCCTCGTATTATGAATGAACGCCATGAGGTTAATACCAGAAAAGAGCTCTCTCTCTCACTGTGTGTGTGTGTGTGTCATACTTAAACGCATGCTTTGATTCAAAGTTATTGTTTTGAGATGGATGGTATTGTGTTTTGTACCTGCCCTCTGCTATTATGTTCCTGAACTGAACGGCTACTTTAGAGCTCTGGCATGTATAAAATTTGACCTCTCTTATTGAATGTGAACTAGGATGAAATACCAATTTTAATAGGAATATTTGGGGTGTATCCTTCACTCTATCTATTGTAAAATTTCCGCAAGACTGTGCATAATGTTTTCCATGCCTTATGTCTAGATATATACTCATAGGTTTCTCATAAAAAATGGAAGGGTTAAGAAAGGATGGTGAAGGTAAAGGGTTGTGACAAGCCTGCAGGAGACAAAGCTTAGTACAACATTGATGAACTTCAATTTTCTGAGAAATCCTTCACCATCTTTTTGCAACTCTTCCCGAAATAGGCTTTAGAGCTATCCTTCACGGTCATCTATTAAACTCAAGTATAATTACTTCAACAGTGCATTAGTGAGCTGTGATCGGGTTGGACAAGGTTTTCCTTGTACCTTAGTTACTCACTTTCTACAACAAAATGAGGATAGGTGGGCTATCCACCCAATGCTGCCTGTTTGACCTTGATATTCAAAAGAAGAAACAAAGGGATCATTATCCATCTCACTTAGTTTTTAATAGGTATTCTTCATGCACCATTGAAAAGATGTGAGGGTCACATTAGATCGGAATCACGAAAGTGCGTTAGTGGTTATTCTCCAACCATGTTAGAAATCATATCCAAGCATTAAAAGTATAATTAACCACCTCTAATGCTCAGTATTAACTAACCACTACAATGATTATTTGAACATTCGCTCTTGGACATATATTATAGCATATTATTTAATATAATTTTGCCCTTTGCTACTCTGAGCTGATAATAGTTGGACCCTCCATGATATTCTTGGATAACGTTTCCTAGTAAGTTGTTGCATTTATGTTTTATTTTTTTTAATAAGAGGAAACTCATCTAATGTTTTGAGTGGGAGAAAGCATGTCACTTGATATTTCTGTCTTTGAGAAACTTTTGTTTAAGCCTTACTGTACATGATTGTTGCAAGGTTATGCTGAAATCTGGAAAGTATGAGCAACTTCACAATCTTTTTACAAAAATGAAGAAGAATGGACAAACTCTAAAGGCAAACACTTACAGAGGTATTTTCATCTGTATGTCTTCTGCAAATGGTTGTTTCTGGACCCTTGACTTAATGAATCTCTGACTCTGGCATGGGACTGTAGTTCTTGTCAAAGCTTTTTGGGAGGAAGGAAATGTCAATGGAGCTATTGAGGCAGTCAGGGATATGGAACAAAGAGGAGTAGTTGGATCTGCCAGTGTCTATTACGAACTAGCTTGTTGTTTATGTTACAATGGGAAGTGGCAAGATGCATTAGTAGAGGTAGGTTCACCGTCAATATATTTAACTTACTTATTTAGCATACGGCTTTTCAGGACCTTTGTCTCGGATCATTTCTTTATTTAACTTTATAATCTCTACATCCTGACTAAAGCAAATTTATGTTCAACGTTCAATGACGATTTCTTTTCTTTTTTCTTACTTTTCATGATTCTGGAAATAAATCTTTCCAGAAGGGTTTCGGCAGTGTTTATGATAAATTCAAATTTTAGGTGTTATAATGCATTCAAATCTTGTGAAAAATATCATCACATTTATTAAACCACCAATTCATCCAAAAGCCTAAGTTGGTGGTTGAAGGCAAATTTAATTATATTTCACTAACAACATTCATGATCTTTTAGCAACACAATCTTGATTGTAACAGTTGCAGGTAGGAAGTTCTGTTCTCATTATATAAACGTGCCTGCAGGTGGAAAAAATGAAAACACTATCACACATGAAACCTTTGGTGGTGACCTTCACTGGCATGATCTCATCTTCCTTCAATGGTGGACATATTGATGATTGTATATCCATTTTCGAGTACATGAAGCAAATATGTGCCCCGAATATAGGAACCATAAATACCATGCTCAAAGTTTATGGCCGAAATGATATGTATTCTAAAGCAAAAGATTTGTTTGAAGAAATAAAGAGAAAAGCTGATAGTTCCTCCCATGATAGCGCTGTTCCTTCTTTAGTGCCGGATGAATATACGTATGCCTCAATGCTTGAGGCAGCTGCTAGTTCACTCCAATGGGAATATTTTGAGAGCGTATACAGAGAAATGGCTCTGTCGGGATACCAGCTTGATCAGAGTAAACACGCATTATTACTTGTGGAAGCATCCAAAGCTGGGAAGGTGGAAACTCTTCCCTCTTTCCTTTATCTATATTTTAGAACCTTTAGCCAGTTCTTGAAAACTGAATCCTTCCAGTGTTTGGTTATTTCTTGACATCGATCTTTTAATTTTACATGTCCCTTCATTTGTAGTGAAGTTAGTCTTAAATAGATAGGCACCTGAACTAATATACTAAAGTTTATCTATTTCAGTGGTATCTGTTGGATCATGCATTTGACACAATCTTGGAAGCTGGACAGATTCCCCATCCATTGTTGTTCACAGAAATGATATTGCAACTCACAACTCAAGATAACTATGAGCAGGCTGTCACCTTAGTTAGAACCATGGGTTATGCTCCATTTCAAGTGAGTGAAAGGCAATGGACAGAACTTTTTGAAGGGAACACGGACAGAATTCGTCGGAATAACTTGAAACAACTGTTGCATGCTCTTGGCGACTGTGATGCTTCAGAAGCCACGGTCTCGAACTTGTCAAGGTCACTGCAGTCTCTTTGCAAATTTGACATACCAGAGAACACCTCCCAATCTGTAGCTTGTGACCATGATGCAACAGATGAATTGCAACTTCCTGATTCTGAAAACATGGAGAATATGAAGCTTCACCCAGATGAAGACGAGTCATTGGATATCATTCCTGTTGACCATGCAAGTTTGAACATGAAAGTCAATAGTGAGTCAAAGATGTCTCCTTGGTCAGTGAGTATTTCTGATGGTGCTTTAGGGACTGGCCAATTTTCAGACGGTTCCAACAATGTGCACTCGCCTTTTGATTTATGCGGTGAAAGCGAGGACGATGAGGAAGAACTTAACACGTTACTTGATGAATTTGATGATGCTTATGATTCAAACTTGCCTGCTGTCAATGAAATATTGGAAACCTGGAAAGAGGAGAGAAAAGCTGATGGGTTATTTCTCCACTCTTTGAATTAGTACTTTAGTACTGTCTTGTCATGTGTATGTATATAGTACATTTCTACATAATTTGCATATCCATAGCTTTAAATCGTTGCATTTCACTATAATATAGTGTGGCGGCCTTTTTCCATAACGCTAGAGAGTATGTTTTACTGACAAATAACCTCCCAATAACAACAACGGTCCGA

mRNA sequence

CTTTTGCTTCCGGAAATGGAAGCTTTGAACTCAAATACACCAATTCCTTCACCAAAATTTGAACCAGATACCGATAAAATTAAGCGAATGCTTCTCCAGAAGGGTGTTTATCCCACTCCCAGAATTGTCCGCTCACTCCGCAAGAAAGAAATCCAGAAGTACAATCGCAAACTCAAGCGAGTGGCCGAACGACAATCCGCTCAGTCGCCACCTCTTTCTGAGTCCCAAAAGCAACTTATCGCCGAGGAAACTCATTTTCTGACGTTGAGAAGCGAGTACAAGGAGTTCTCGAAGGCCATTGAGGCAAAACCAGCCGGTGGTTTGATGGTCGGGAGGCCTTGGGAGAGACTGGAAAGAGTTAATTTTAAAGAACTTACGGGTGTTAGAACGGGATACAATCGGGATAGTCTGAAGAAGGAGAGTTTGAGAGAATTGAGGAAGCTGTTTGAGACTCGTAAGCTCGAGGAATCGCAGTGGGCTTTGGATGACGACGTGGAACTGAAGGAAGAGTGGTTGGAGAGTGAAAATGATCGATATGACGTCGTGAAACGGAGGCGTGGCGACGGAGAGGTTATTCGCTTCCTTGTTGACAGGCTAAGTTCGGGACCAATTTCAATGAGAGATTGGAAATTCTCGAGGATGATGATACGGTCAGGCTTGCAGTTCAATGAAGGTCAACTACTTAAAATTCTGGACGCCCTTGGTGCTAAGGGATGTTGGAAACAGGCCTTATCAGTGGTTGAGTGGGTATACAATCTGAAAAGTCATAGTCATTCTAAAAGCAGGTTTGTCTATACAAAGCTTTTAGCTGTTCTTGGGATGGCAAGGAAACCACAGGAAGCCCTTCAGATATTTAATTTGATGAGGGGAGACGGCCAGATATATCCTGATATGGCTGCATATCACAGTATAGCTGTTACGCTAGGTCAAGCTGGCCTCTTGAAACAATTGCTGAAAGTTATTGAATTCATGAGGCAGCAACCATCTAAAAAAGTTAGAAACAAGTGCCGCAAATCTTGGGATCCTGCAGTTGAACCCGACCTTGTTATATATAATGCTATTTTGAACGCATGCATTCCCACCCTTGAGTGGAAAGGTGTCTACTGGGTGTTCACACAATTGAGAAAGAGTGGTTTGAGACCTAATGGAGCAACATATGGACTTTCTATGGAGGTTATGCTGAAATCTGGAAAGTATGAGCAACTTCACAATCTTTTTACAAAAATGAAGAAGAATGGACAAACTCTAAAGGCAAACACTTACAGAGTTCTTGTCAAAGCTTTTTGGGAGGAAGGAAATGTCAATGGAGCTATTGAGGCAGTCAGGGATATGGAACAAAGAGGAGTAGTTGGATCTGCCAGTGTCTATTACGAACTAGCTTGTTGTTTATGTTACAATGGGAAGTGGCAAGATGCATTAGTAGAGGTGGAAAAAATGAAAACACTATCACACATGAAACCTTTGGTGGTGACCTTCACTGGCATGATCTCATCTTCCTTCAATGGTGGACATATTGATGATTGTATATCCATTTTCGAGTACATGAAGCAAATATGTGCCCCGAATATAGGAACCATAAATACCATGCTCAAAGTTTATGGCCGAAATGATATGTATTCTAAAGCAAAAGATTTGTTTGAAGAAATAAAGAGAAAAGCTGATAGTTCCTCCCATGATAGCGCTGTTCCTTCTTTAGTGCCGGATGAATATACGTATGCCTCAATGCTTGAGGCAGCTGCTAGTTCACTCCAATGGGAATATTTTGAGAGCGTATACAGAGAAATGGCTCTGTCGGGATACCAGCTTGATCAGAGTAAACACGCATTATTACTTGTGGAAGCATCCAAAGCTGGGAAGTGGTATCTGTTGGATCATGCATTTGACACAATCTTGGAAGCTGGACAGATTCCCCATCCATTGTTGTTCACAGAAATGATATTGCAACTCACAACTCAAGATAACTATGAGCAGGCTGTCACCTTAGTTAGAACCATGGGTTATGCTCCATTTCAAGTGAGTGAAAGGCAATGGACAGAACTTTTTGAAGGGAACACGGACAGAATTCGTCGGAATAACTTGAAACAACTGTTGCATGCTCTTGGCGACTGTGATGCTTCAGAAGCCACGGTCTCGAACTTGTCAAGGTCACTGCAGTCTCTTTGCAAATTTGACATACCAGAGAACACCTCCCAATCTGTAGCTTGTGACCATGATGCAACAGATGAATTGCAACTTCCTGATTCTGAAAACATGGAGAATATGAAGCTTCACCCAGATGAAGACGAGTCATTGGATATCATTCCTGTTGACCATGCAAGTTTGAACATGAAAGTCAATAGTGAGTCAAAGATGTCTCCTTGGTCAGTGAGTATTTCTGATGGTGCTTTAGGGACTGGCCAATTTTCAGACGGTTCCAACAATGTGCACTCGCCTTTTGATTTATGCGGTGAAAGCGAGGACGATGAGGAAGAACTTAACACGTTACTTGATGAATTTGATGATGCTTATGATTCAAACTTGCCTGCTGTCAATGAAATATTGGAAACCTGGAAAGAGGAGAGAAAAGCTGATGGGTTATTTCTCCACTCTTTGAATTAGTACTTTAGTACTGTCTTGTCATGTGTATGTATATAGTACATTTCTACATAATTTGCATATCCATAGCTTTAAATCGTTGCATTTCACTATAATATAGTGTGGCGGCCTTTTTCCATAACGCTAGAGAGTATGTTTTACTGACAAATAACCTCCCAATAACAACAACGGTCCGA

Coding sequence (CDS)

ATGGAAGCTTTGAACTCAAATACACCAATTCCTTCACCAAAATTTGAACCAGATACCGATAAAATTAAGCGAATGCTTCTCCAGAAGGGTGTTTATCCCACTCCCAGAATTGTCCGCTCACTCCGCAAGAAAGAAATCCAGAAGTACAATCGCAAACTCAAGCGAGTGGCCGAACGACAATCCGCTCAGTCGCCACCTCTTTCTGAGTCCCAAAAGCAACTTATCGCCGAGGAAACTCATTTTCTGACGTTGAGAAGCGAGTACAAGGAGTTCTCGAAGGCCATTGAGGCAAAACCAGCCGGTGGTTTGATGGTCGGGAGGCCTTGGGAGAGACTGGAAAGAGTTAATTTTAAAGAACTTACGGGTGTTAGAACGGGATACAATCGGGATAGTCTGAAGAAGGAGAGTTTGAGAGAATTGAGGAAGCTGTTTGAGACTCGTAAGCTCGAGGAATCGCAGTGGGCTTTGGATGACGACGTGGAACTGAAGGAAGAGTGGTTGGAGAGTGAAAATGATCGATATGACGTCGTGAAACGGAGGCGTGGCGACGGAGAGGTTATTCGCTTCCTTGTTGACAGGCTAAGTTCGGGACCAATTTCAATGAGAGATTGGAAATTCTCGAGGATGATGATACGGTCAGGCTTGCAGTTCAATGAAGGTCAACTACTTAAAATTCTGGACGCCCTTGGTGCTAAGGGATGTTGGAAACAGGCCTTATCAGTGGTTGAGTGGGTATACAATCTGAAAAGTCATAGTCATTCTAAAAGCAGGTTTGTCTATACAAAGCTTTTAGCTGTTCTTGGGATGGCAAGGAAACCACAGGAAGCCCTTCAGATATTTAATTTGATGAGGGGAGACGGCCAGATATATCCTGATATGGCTGCATATCACAGTATAGCTGTTACGCTAGGTCAAGCTGGCCTCTTGAAACAATTGCTGAAAGTTATTGAATTCATGAGGCAGCAACCATCTAAAAAAGTTAGAAACAAGTGCCGCAAATCTTGGGATCCTGCAGTTGAACCCGACCTTGTTATATATAATGCTATTTTGAACGCATGCATTCCCACCCTTGAGTGGAAAGGTGTCTACTGGGTGTTCACACAATTGAGAAAGAGTGGTTTGAGACCTAATGGAGCAACATATGGACTTTCTATGGAGGTTATGCTGAAATCTGGAAAGTATGAGCAACTTCACAATCTTTTTACAAAAATGAAGAAGAATGGACAAACTCTAAAGGCAAACACTTACAGAGTTCTTGTCAAAGCTTTTTGGGAGGAAGGAAATGTCAATGGAGCTATTGAGGCAGTCAGGGATATGGAACAAAGAGGAGTAGTTGGATCTGCCAGTGTCTATTACGAACTAGCTTGTTGTTTATGTTACAATGGGAAGTGGCAAGATGCATTAGTAGAGGTGGAAAAAATGAAAACACTATCACACATGAAACCTTTGGTGGTGACCTTCACTGGCATGATCTCATCTTCCTTCAATGGTGGACATATTGATGATTGTATATCCATTTTCGAGTACATGAAGCAAATATGTGCCCCGAATATAGGAACCATAAATACCATGCTCAAAGTTTATGGCCGAAATGATATGTATTCTAAAGCAAAAGATTTGTTTGAAGAAATAAAGAGAAAAGCTGATAGTTCCTCCCATGATAGCGCTGTTCCTTCTTTAGTGCCGGATGAATATACGTATGCCTCAATGCTTGAGGCAGCTGCTAGTTCACTCCAATGGGAATATTTTGAGAGCGTATACAGAGAAATGGCTCTGTCGGGATACCAGCTTGATCAGAGTAAACACGCATTATTACTTGTGGAAGCATCCAAAGCTGGGAAGTGGTATCTGTTGGATCATGCATTTGACACAATCTTGGAAGCTGGACAGATTCCCCATCCATTGTTGTTCACAGAAATGATATTGCAACTCACAACTCAAGATAACTATGAGCAGGCTGTCACCTTAGTTAGAACCATGGGTTATGCTCCATTTCAAGTGAGTGAAAGGCAATGGACAGAACTTTTTGAAGGGAACACGGACAGAATTCGTCGGAATAACTTGAAACAACTGTTGCATGCTCTTGGCGACTGTGATGCTTCAGAAGCCACGGTCTCGAACTTGTCAAGGTCACTGCAGTCTCTTTGCAAATTTGACATACCAGAGAACACCTCCCAATCTGTAGCTTGTGACCATGATGCAACAGATGAATTGCAACTTCCTGATTCTGAAAACATGGAGAATATGAAGCTTCACCCAGATGAAGACGAGTCATTGGATATCATTCCTGTTGACCATGCAAGTTTGAACATGAAAGTCAATAGTGAGTCAAAGATGTCTCCTTGGTCAGTGAGTATTTCTGATGGTGCTTTAGGGACTGGCCAATTTTCAGACGGTTCCAACAATGTGCACTCGCCTTTTGATTTATGCGGTGAAAGCGAGGACGATGAGGAAGAACTTAACACGTTACTTGATGAATTTGATGATGCTTATGATTCAAACTTGCCTGCTGTCAATGAAATATTGGAAACCTGGAAAGAGGAGAGAAAAGCTGATGGGTTATTTCTCCACTCTTTGAATTAG

Protein sequence

MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQSAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKELTGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRRRGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDLFEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTMGYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDIPENTSQSVACDHDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMSPWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNEILETWKEERKADGLFLHSLN*
Homology
[Close]
BLAST of CSPI06G28940 vs. ExPASy Swiss-Prot
Match: Q9FJW6 (Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DG1 PE=1 SV=2)

HSP 1 Score: 837.4 bits (2162), Expect = 1.4e-241
Identity = 421/709 (59.38%), Postives = 548/709 (77.29%), Query Frame = 0 

Query: 13  PKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQSAQSPPLSESQK 72
           P+FEPD +KIKR LL+ GV PTP+I+ +LRKKEIQK+NR+ KR  E   +++   +E+QK
Sbjct: 17  PEFEPDMEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETE---SEAEVYTEAQK 76

Query: 73  QLIAEETHFLTLRSEYKEFSKAIEAKPAG--GLMVGRPWERLERVNFKEL-TGV-RTGYN 132
           Q + EE  F TLR EYK+F+++I  K  G  GLMVG PWE +ERV  KEL +GV R   +
Sbjct: 77  QSMEEEARFQTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVS 136

Query: 133 RDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRRRGDGEVIR 192
              LKKE+L+EL+K+ E    ++ +W LDDDV+++E  L+ E   +D  KR R +GE +R
Sbjct: 137 AGELKKENLKELKKILE----KDLRWVLDDDVDVEEFDLDKE---FDPAKRWRNEGEAVR 196

Query: 193 FLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNL 252
            LVDRLS   I+ + WKF RMM +SGLQF E Q+LKI+D LG K  WKQA +VV WVY+ 
Sbjct: 197 VLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSD 256

Query: 253 KSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGL 312
           K   H +SRFVYTKLL+VLG AR+PQEALQIFN M GD Q+YPDMAAYH IAVTLGQAGL
Sbjct: 257 KKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGL 316

Query: 313 LKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQ 372
           LK+LLKVIE MRQ+P+K  +N  +K+WDP +EPDLV+YNAILNAC+PTL+WK V WVF +
Sbjct: 317 LKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVE 376

Query: 373 LRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGN 432
           LRK+GLRPNGATYGL+MEVML+SGK++++H+ F KMK +G+  KA TY+VLV+A W EG 
Sbjct: 377 LRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGK 436

Query: 433 VNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFT 492
           +  A+EAVRDMEQ+GV+G+ SVYYELACCLC NG+W DA++EV +MK L + +PL +TFT
Sbjct: 437 IEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFT 496

Query: 493 GMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDLFEEIKRKA 552
           G+I++S NGGH+DDC++IF+YMK  C PNIGT N MLKVYGRNDM+S+AK+LFEEI  + 
Sbjct: 497 GLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRK 556

Query: 553 DSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALLLVE 612
           ++         LVP+EYTY+ MLEA+A SLQWEYFE VY+ M LSGYQ+DQ+KHA +L+E
Sbjct: 557 ET--------HLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIE 616

Query: 613 ASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTMGYAPFQVS 672
           AS+AGKW LL+HAFD +LE G+IPHPL FTE++   T + ++++A+TL+ T+  A FQ+S
Sbjct: 617 ASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQIS 676

Query: 673 ERQWTELFEGNTDRIRRNNLKQLLHALGDCD-ASEATVSNLSRSLQSLC 717
           E +WT+LFE + D + ++NL +L   L +CD  SE TVSNLS+SL+S C
Sbjct: 677 EEEWTDLFEEHQDWLTQDNLHKLSDHLIECDYVSEPTVSNLSKSLKSRC 707

[Close]
BLAST of CSPI06G28940 vs. ExPASy Swiss-Prot
Match: Q9SA76 (Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2279 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 5.3e-95
Identity = 181/497 (36.42%), Postives = 290/497 (58.35%), Query Frame = 0 

Query: 187 IRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVY 246
           I  L   L+   I+M +W+FS+ +  + +++ +  +++++  LG  G W++ L V+EW+ 
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496

Query: 247 NLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQA 306
               +  +K R +YT  L VLG +R+P EAL +F+ M      YPDM AY SIAVTLGQA
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556

Query: 307 GLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVF 366
           G +K+L  VI+ MR  P KK +    + WDP +EPD+V+YNA+LNAC+   +W+G +WV 
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616

Query: 367 TQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEE 426
            QL++ G +P+  TYGL MEVML   KY  +H  F KM+K+     A  YRVLV   W+E
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKS-SIPNALAYRVLVNTLWKE 676

Query: 427 GNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDAL-----VEVEKMKTLSHM- 486
           G  + A+  V DME RG+VGSA++YY+LA CLC  G+  + L     V    +K + ++ 
Sbjct: 677 GKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLI 736

Query: 487 ---------------------KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIG 546
                                KPLVVT+TG+I +  + G+I +   IF+ MK++C+PN+ 
Sbjct: 737 YKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLV 796

Query: 547 TINTMLKVYGRNDMYSKAKDLFEEIKRKADSSSHDSAVPS-LVPDEYTYASMLEAAASSL 606
           T N MLK Y +  ++ +A++LF+++    +   + S   S ++PD YT+ +ML+  A   
Sbjct: 797 TCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQE 856

Query: 607 QWEYFESVYREMALSGYQLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFT 656
           +W+ F   YREM   GY  +  +H  +++EAS+AGK  +++  ++ +  + +IP   L  
Sbjct: 857 KWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIK 916

[Close]
BLAST of CSPI06G28940 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-26
Identity = 98/418 (23.44%), Postives = 179/418 (42.82%), Query Frame = 0 

Query: 221 QLLKILDALGAKGCWKQALSVVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIF 280
           +LL  L  LG    +  AL   +W    K +       V   ++++LG   +   A  +F
Sbjct: 137 ELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMF 196

Query: 281 NLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIEFMRQQ------------------ 340
           N ++ DG    D+ +Y S+      +G  ++ + V + M +                   
Sbjct: 197 NGLQEDG-FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 256

Query: 341 ---PSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGA 400
              P  K+ +   K     + PD   YN ++  C      +    VF +++ +G   +  
Sbjct: 257 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 316

Query: 401 TYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGNVNGAIEAVRDM 460
           TY   ++V  KS + ++   +  +M  NG +    TY  L+ A+  +G ++ A+E    M
Sbjct: 317 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 376

Query: 461 EQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGH 520
            ++G       Y  L       GK + A+   E+M+  +  KP + TF   I    N G 
Sbjct: 377 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN-AGCKPNICTFNAFIKMYGNRGK 436

Query: 521 IDDCISIFEYMKQIC--APNIGTINTMLKVYGRNDMYSKAKDLFEEIKRKADSSSHDSAV 580
             + + IF+ +  +C  +P+I T NT+L V+G+N M S+   +F+E+KR           
Sbjct: 437 FTEMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR----------- 496

Query: 581 PSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALLLVEASKAGKW 616
              VP+  T+ +++ A +    +E   +VYR M  +G   D S +  +L   ++ G W
Sbjct: 497 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540

[Close]
BLAST of CSPI06G28940 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.2e-19
Identity = 97/444 (21.85%), Postives = 188/444 (42.34%), Query Frame = 0 

Query: 236 KQALSVVEWVYNLKSHSH-SKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMA 295
           K+ +S  E V+     S  S + F Y  L+     A     AL +F+ M   G + P++ 
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL-PNVV 242

Query: 296 AYHSIAVTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACI 355
            Y+++   +     L+++    + +R    K             +EP+L+ YN ++N   
Sbjct: 243 TYNTL---IDGYCKLRKIDDGFKLLRSMALK------------GLEPNLISYNVVINGLC 302

Query: 356 PTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKAN 415
                K V +V T++ + G   +  TY   ++   K G + Q   +  +M ++G T    
Sbjct: 303 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 362

Query: 416 TYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKM 475
           TY  L+ +  + GN+N A+E +  M  RG+  +   Y  L       G   +A   + +M
Sbjct: 363 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 422

Query: 476 KTLSHMKPLVVTFTGMISSSFNGGHIDDCISIFEYMKQI-CAPNIGTINTMLKVYGRNDM 535
              +   P VVT+  +I+     G ++D I++ E MK+   +P++ + +T+L  + R+  
Sbjct: 423 ND-NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 482

Query: 536 YSKAKDLFEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALS 595
             +A  +  E+  K            + PD  TY+S+++      + +    +Y EM   
Sbjct: 483 VDEALRVKREMVEK-----------GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 542

Query: 596 GYQLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 655
           G   D+  +  L+      G         + ++E G +P  + ++ +I  L  Q    +A
Sbjct: 543 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 598

Query: 656 VTLVRTMGYAPFQVSERQWTELFE 678
             L+  + Y     S+  +  L E
Sbjct: 603 KRLLLKLFYEESVPSDVTYHTLIE 598

[Close]
BLAST of CSPI06G28940 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.1e-18
Identity = 79/341 (23.17%), Postives = 146/341 (42.82%), Query Frame = 0 

Query: 260 YTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIEFM 319
           Y  LL+   +     EA  +F  M  DG I PD+  Y  +  T G+   L++L KV + +
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGK---LRRLEKVCDLL 309

Query: 320 RQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGA 379
            +  S                PD+  YN +L A   +   K    VF Q++ +G  PN  
Sbjct: 310 GEMAS------------GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 369

Query: 380 TYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGNVNGAIEAVRDM 439
           TY + + +  +SG+Y+ +  LF +MK +     A TY +L++ F E G     +    DM
Sbjct: 370 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 429

Query: 440 EQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGH 499
            +  +      Y  +       G  +DA   ++ M T + + P    +TG+I +      
Sbjct: 430 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGVIEAFGQAAL 489

Query: 500 IDDCISIFEYMKQICA-PNIGTINTMLKVYGRNDMYSKAKDLFEEIKRKADSSSHDSAVP 559
            ++ +  F  M ++ + P+I T +++L  + R  +  +++ +   +         DS +P
Sbjct: 490 YEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV--------DSGIP 549

Query: 560 SLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQ 600
               +  T+ + +EA     ++E     Y +M  S    D+
Sbjct: 550 R---NRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562

[Close]
BLAST of CSPI06G28940 vs. ExPASy TrEMBL
Match: A0A0A0KFY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495690 PE=4 SV=1)

HSP 1 Score: 1708.0 bits (4422), Expect = 0.0e+00
Identity = 860/860 (100.00%), Postives = 860/860 (100.00%), Query Frame = 0 

Query: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
           MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ
Sbjct: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60

Query: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
           SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL
Sbjct: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120

Query: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
           TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180

Query: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300

Query: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420
           GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480
           KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM
Sbjct: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480

Query: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540
           KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL
Sbjct: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540

Query: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600
           FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS
Sbjct: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600

Query: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660
           KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM
Sbjct: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660

Query: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720
           GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI
Sbjct: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720

Query: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMS 780
           PENTSQSVACDHDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMS
Sbjct: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMS 780

Query: 781 PWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNE 840
           PWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNE
Sbjct: 781 PWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNE 840

Query: 841 ILETWKEERKADGLFLHSLN 861
           ILETWKEERKADGLFLHSLN
Sbjct: 841 ILETWKEERKADGLFLHSLN 860

[Close]
BLAST of CSPI06G28940 vs. ExPASy TrEMBL
Match: A0A5D3CLI0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003990 PE=4 SV=1)

HSP 1 Score: 1599.7 bits (4141), Expect = 0.0e+00
Identity = 807/860 (93.84%), Postives = 829/860 (96.40%), Query Frame = 0 

Query: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
           MEALNSN PIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKR+AERQ
Sbjct: 1   MEALNSNAPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRLAERQ 60

Query: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
           S QSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNF EL
Sbjct: 61  SDQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFNEL 120

Query: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
           TGVRTGYNRDSLKKESLRELRKLFETRKLEE +WALDDDVELKEEWL+SEN +YD VKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEELEWALDDDVELKEEWLQSENGQYDAVKRR 180

Query: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300

Query: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLKVIE MRQQPSKKVRNKCRKSWDPAVEPDLVIYN ILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNTILNACIPTLEWK 360

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420
           GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKK+G+TLKANTYRVLV
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKSGETLKANTYRVLV 420

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480
           KAFWEEGN +GAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM
Sbjct: 421 KAFWEEGNADGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480

Query: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540
           KPLVVTFTGMI SSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDM+SKAKDL
Sbjct: 481 KPLVVTFTGMILSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMFSKAKDL 540

Query: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600
           FEEIK+KADSSSH+SAVPSL+PDEYTYASML+AAASSLQWEYFE+VYREMALSGY+LDQS
Sbjct: 541 FEEIKKKADSSSHNSAVPSLLPDEYTYASMLQAAASSLQWEYFENVYREMALSGYRLDQS 600

Query: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660
           KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQ+NYEQAVTLVRTM
Sbjct: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQENYEQAVTLVRTM 660

Query: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720
           GYAPFQVSERQWTELFEGN DRI RNNLKQLL ALGDCDASEATVSNLSRSLQSLCKF I
Sbjct: 661 GYAPFQVSERQWTELFEGNKDRICRNNLKQLLDALGDCDASEATVSNLSRSLQSLCKFGI 720

Query: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMS 780
            E+TSQS+ACD +ATD L+LPDS+NMENMKLHPD+DESLDIIPVDHASLNMKVNSES MS
Sbjct: 721 LESTSQSIACDLNATDGLKLPDSKNMENMKLHPDQDESLDIIPVDHASLNMKVNSESNMS 780

Query: 781 PWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNE 840
           PWS SISDG LGTGQFSD SNN HS FD   ESEDDE ELN LLD FDD+YDSNLPA NE
Sbjct: 781 PWSPSISDGVLGTGQFSDSSNNEHSTFDSWDESEDDEVELNMLLDGFDDSYDSNLPAANE 840

Query: 841 ILETWKEERKADGLFLHSLN 861
           ILETWKEERKADGLFLH LN
Sbjct: 841 ILETWKEERKADGLFLHPLN 860

[Close]
BLAST of CSPI06G28940 vs. ExPASy TrEMBL
Match: A0A1S3B127 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484858 PE=4 SV=1)

HSP 1 Score: 1599.7 bits (4141), Expect = 0.0e+00
Identity = 807/860 (93.84%), Postives = 829/860 (96.40%), Query Frame = 0 

Query: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
           MEALNSN PIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKR+AERQ
Sbjct: 1   MEALNSNAPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRLAERQ 60

Query: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
           S QSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNF EL
Sbjct: 61  SDQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFNEL 120

Query: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
           TGVRTGYNRDSLKKESLRELRKLFETRKLEE +WALDDDVELKEEWL+SEN +YD VKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEELEWALDDDVELKEEWLQSENGQYDAVKRR 180

Query: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300

Query: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLKVIE MRQQPSKKVRNKCRKSWDPAVEPDLVIYN ILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNTILNACIPTLEWK 360

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420
           GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKK+G+TLKANTYRVLV
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKSGETLKANTYRVLV 420

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480
           KAFWEEGN +GAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM
Sbjct: 421 KAFWEEGNADGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480

Query: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540
           KPLVVTFTGMI SSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDM+SKAKDL
Sbjct: 481 KPLVVTFTGMILSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMFSKAKDL 540

Query: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600
           FEEIK+KADSSSH+SAVPSL+PDEYTYASML+AAASSLQWEYFE+VYREMALSGY+LDQS
Sbjct: 541 FEEIKKKADSSSHNSAVPSLLPDEYTYASMLQAAASSLQWEYFENVYREMALSGYRLDQS 600

Query: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660
           KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQ+NYEQAVTLVRTM
Sbjct: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQENYEQAVTLVRTM 660

Query: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720
           GYAPFQVSERQWTELFEGN DRI RNNLKQLL ALGDCDASEATVSNLSRSLQSLCKF I
Sbjct: 661 GYAPFQVSERQWTELFEGNKDRICRNNLKQLLDALGDCDASEATVSNLSRSLQSLCKFGI 720

Query: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMS 780
            E+TSQS+ACD +ATD L+LPDS+NMENMKLHPD+DESLDIIPVDHASLNMKVNSES MS
Sbjct: 721 LESTSQSIACDLNATDGLKLPDSKNMENMKLHPDQDESLDIIPVDHASLNMKVNSESNMS 780

Query: 781 PWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNE 840
           PWS SISDG LGTGQFSD SNN HS FD   ESEDDE ELN LLD FDD+YDSNLPA NE
Sbjct: 781 PWSPSISDGVLGTGQFSDSSNNEHSTFDSWDESEDDEVELNMLLDGFDDSYDSNLPAANE 840

Query: 841 ILETWKEERKADGLFLHSLN 861
           ILETWKEERKADGLFLH LN
Sbjct: 841 ILETWKEERKADGLFLHPLN 860

[Close]
BLAST of CSPI06G28940 vs. ExPASy TrEMBL
Match: A0A6J1ILT7 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111477629 PE=4 SV=1)

HSP 1 Score: 1447.2 bits (3745), Expect = 0.0e+00
Identity = 735/862 (85.27%), Postives = 788/862 (91.42%), Query Frame = 0 

Query: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
           MEAL++N  +PSPKFEPD +KIKR L+QKGV+PTP+IVRSL KKEIQK+NRKLKR+AERQ
Sbjct: 20  MEALSTNASVPSPKFEPDIEKIKRTLVQKGVHPTPKIVRSLCKKEIQKHNRKLKRLAERQ 79

Query: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
           +AQSPPLSESQKQLI EETHFLTLRSEYKEFSKAIEA+PAGGLMVGRPWERLERVN KE 
Sbjct: 80  NAQSPPLSESQKQLIEEETHFLTLRSEYKEFSKAIEARPAGGLMVGRPWERLERVNLKEH 139

Query: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
           TG RT YNRD+LKKESLRELRKLFE RKLEE QW LDDDVELKEEWL SEN   D VKRR
Sbjct: 140 TGFRTEYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKEEWLGSENGHSDAVKRR 199

Query: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGDGEVIRFLVDRLSS PISMRDWKFSRMMI+SGLQFNEGQLLKILD+LGAKGCWKQALS
Sbjct: 200 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIQSGLQFNEGQLLKILDSLGAKGCWKQALS 259

Query: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSHSKSRFVYTKLLAVLG ARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 260 VVEWVYNLKSHSHSKSRFVYTKLLAVLGKARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 319

Query: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLK+IE+MRQQPSKKVRN CRK WDPAVEPDLVIYNAILNACIPTLEWK
Sbjct: 320 VTLGQAGLLKQLLKIIEYMRQQPSKKVRNMCRKYWDPAVEPDLVIYNAILNACIPTLEWK 379

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420
            VYWVFTQLRK+GL+PNGATYGLSMEVMLKSGKYEQ+H LFTKMK +G TLKANTYRVLV
Sbjct: 380 SVYWVFTQLRKNGLKPNGATYGLSMEVMLKSGKYEQVHMLFTKMKNSGSTLKANTYRVLV 439

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480
           KAFWEEGNV+GAIEAVRDMEQRGVVGSASVYYELACCLCY+G+WQDALVEVEKMKTLSHM
Sbjct: 440 KAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYHGRWQDALVEVEKMKTLSHM 499

Query: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540
           KPLVVTFTGMI SSF+GGHIDDCISIFEYMKQ CAPNIGTINTMLKV+GRNDM+SKAKDL
Sbjct: 500 KPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINTMLKVFGRNDMFSKAKDL 559

Query: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600
           +EEIKRKAD SS  SAV S+VPD+YTY SML+AAAS+ QWEYFE+VYREMALSGY+LDQS
Sbjct: 560 YEEIKRKADHSSQSSAVSSIVPDQYTYDSMLQAAASAQQWEYFENVYREMALSGYRLDQS 619

Query: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660
           KHA+LLVEAS+AGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA+TLVRTM
Sbjct: 620 KHAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAITLVRTM 679

Query: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720
            YAPFQVSERQWTELFEGNTDRI  NNLK+L  AL DCDASEATVSNLS SLQSLCK  I
Sbjct: 680 SYAPFQVSERQWTELFEGNTDRICWNNLKKLSDALSDCDASEATVSNLSNSLQSLCKRGI 739

Query: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDE-----DESLDIIPVDHASLNMKVNS 780
           PENTSQS+A DHD TD LQLP SEN +NMKLH D      + SLDIIPV+HASL    N 
Sbjct: 740 PENTSQSIASDHDTTDGLQLPGSENKKNMKLHLDHVTDCCEGSLDIIPVNHASL----NC 799

Query: 781 ESKMSPWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNL 840
           +SKM PWS+S+SDG L TG+FSD SNN  S FDL  +SEDDEEEL+ LLD FDD+Y SNL
Sbjct: 800 DSKMPPWSLSLSDGVLETGKFSDRSNNERSTFDLRDDSEDDEEELSMLLDGFDDSYVSNL 859

Query: 841 PAVNEILETWKEERKADGLFLH 858
           P+V+EIL+TW+EERK DGL+LH
Sbjct: 860 PSVDEILKTWEEERKNDGLYLH 877

[Close]
BLAST of CSPI06G28940 vs. ExPASy TrEMBL
Match: A0A6J1GG29 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453855 PE=4 SV=1)

HSP 1 Score: 1446.8 bits (3744), Expect = 0.0e+00
Identity = 735/862 (85.27%), Postives = 786/862 (91.18%), Query Frame = 0 

Query: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
           MEAL++N  +PSPKFEPD +KIKR LLQKGV+PTP+IVRSL KKEIQK+NRKLKR+AERQ
Sbjct: 44  MEALSTNASVPSPKFEPDIEKIKRTLLQKGVHPTPKIVRSLCKKEIQKHNRKLKRLAERQ 103

Query: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
            AQSPPLSESQKQLI EET FLTLRSEYKEFSKAIEA+PAGGLMVGRPWERLERVN KEL
Sbjct: 104 DAQSPPLSESQKQLIQEETQFLTLRSEYKEFSKAIEARPAGGLMVGRPWERLERVNLKEL 163

Query: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
           TG RT YNRD+LKKESLRELRKLFE RKLEE QW LDDDVELK+EWL SEN   D VKRR
Sbjct: 164 TGFRTEYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKDEWLGSENGHSDAVKRR 223

Query: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGDGEVIRFLVDRLSS PISMRDWKFSRMMI+SGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 224 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIQSGLQFNEGQLLKILDALGAKGCWKQALS 283

Query: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSHSKSRFVYTKLLAVLG ARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 284 VVEWVYNLKSHSHSKSRFVYTKLLAVLGKARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 343

Query: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLK+IE+MRQQPSKKVRN CRK WDPAVEPDLVIYNAILNAC+PTLEWK
Sbjct: 344 VTLGQAGLLKQLLKIIEYMRQQPSKKVRNMCRKYWDPAVEPDLVIYNAILNACVPTLEWK 403

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420
            VYWVFTQLRK+GL+PNGATYGLSMEVMLKSGKYEQ+H LFTKMK +G TLKANTYRVLV
Sbjct: 404 SVYWVFTQLRKNGLKPNGATYGLSMEVMLKSGKYEQVHMLFTKMKNSGSTLKANTYRVLV 463

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480
           KAFWEEGNV+GAIEAVRDMEQRGVVGSASVYYELACCLCY+G+WQDALVEVEKMKTLSHM
Sbjct: 464 KAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYHGRWQDALVEVEKMKTLSHM 523

Query: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540
           KPLVVTFTGMI SSF+GGHIDDCISIFEYMKQ CAPNIGTINTMLKV+GRNDM+SKAKDL
Sbjct: 524 KPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINTMLKVFGRNDMFSKAKDL 583

Query: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600
           +EEIKRKAD SS  SAV S+VPD+YTY SML+AAAS+ QWEYFE+VYREMALSGY+LDQS
Sbjct: 584 YEEIKRKADHSSQSSAVSSIVPDQYTYDSMLQAAASAQQWEYFENVYREMALSGYRLDQS 643

Query: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660
           KHA+LLVEAS+AGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM
Sbjct: 644 KHAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 703

Query: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720
            YAPFQVSERQWTELFEGNTDRI  NNLK+L  AL DCDASEATV NLS SLQSLCK  I
Sbjct: 704 SYAPFQVSERQWTELFEGNTDRICWNNLKKLSDALSDCDASEATVLNLSSSLQSLCKRGI 763

Query: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDE-----DESLDIIPVDHASLNMKVNS 780
           PEN SQS+A DHD TD LQLP  ENM+NMKLH D      + SLDIIPV+HASL    N 
Sbjct: 764 PENASQSIASDHDTTDGLQLPGPENMKNMKLHLDHATDCCEGSLDIIPVNHASL----NC 823

Query: 781 ESKMSPWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNL 840
           +S+M PWS+S+SDG L TG+FSD SNN  S FDL  +SEDDEEEL+ LLD FDD+YDSNL
Sbjct: 824 DSEMPPWSLSLSDGVLETGKFSDRSNNERSTFDLRDDSEDDEEELSMLLDGFDDSYDSNL 883

Query: 841 PAVNEILETWKEERKADGLFLH 858
           P+V+EIL+TWKEERK DGL+LH
Sbjct: 884 PSVDEILKTWKEERKNDGLYLH 901

[Close]
BLAST of CSPI06G28940 vs. NCBI nr
Match: XP_004141982.1 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucumis sativus] >KGN48615.1 hypothetical protein Csa_004447 [Cucumis sativus])

HSP 1 Score: 1708.0 bits (4422), Expect = 0.0e+00
Identity = 860/860 (100.00%), Postives = 860/860 (100.00%), Query Frame = 0 

Query: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
           MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ
Sbjct: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60

Query: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
           SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL
Sbjct: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120

Query: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
           TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180

Query: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300

Query: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420
           GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480
           KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM
Sbjct: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480

Query: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540
           KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL
Sbjct: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540

Query: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600
           FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS
Sbjct: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600

Query: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660
           KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM
Sbjct: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660

Query: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720
           GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI
Sbjct: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720

Query: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMS 780
           PENTSQSVACDHDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMS
Sbjct: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMS 780

Query: 781 PWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNE 840
           PWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNE
Sbjct: 781 PWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNE 840

Query: 841 ILETWKEERKADGLFLHSLN 861
           ILETWKEERKADGLFLHSLN
Sbjct: 841 ILETWKEERKADGLFLHSLN 860

[Close]
BLAST of CSPI06G28940 vs. NCBI nr
Match: XP_008440398.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucumis melo] >KAA0036411.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12807.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1599.7 bits (4141), Expect = 0.0e+00
Identity = 807/860 (93.84%), Postives = 829/860 (96.40%), Query Frame = 0 

Query: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
           MEALNSN PIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKR+AERQ
Sbjct: 1   MEALNSNAPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRLAERQ 60

Query: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
           S QSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNF EL
Sbjct: 61  SDQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFNEL 120

Query: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
           TGVRTGYNRDSLKKESLRELRKLFETRKLEE +WALDDDVELKEEWL+SEN +YD VKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEELEWALDDDVELKEEWLQSENGQYDAVKRR 180

Query: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300

Query: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLKVIE MRQQPSKKVRNKCRKSWDPAVEPDLVIYN ILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNTILNACIPTLEWK 360

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420
           GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKK+G+TLKANTYRVLV
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKSGETLKANTYRVLV 420

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480
           KAFWEEGN +GAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM
Sbjct: 421 KAFWEEGNADGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480

Query: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540
           KPLVVTFTGMI SSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDM+SKAKDL
Sbjct: 481 KPLVVTFTGMILSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMFSKAKDL 540

Query: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600
           FEEIK+KADSSSH+SAVPSL+PDEYTYASML+AAASSLQWEYFE+VYREMALSGY+LDQS
Sbjct: 541 FEEIKKKADSSSHNSAVPSLLPDEYTYASMLQAAASSLQWEYFENVYREMALSGYRLDQS 600

Query: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660
           KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQ+NYEQAVTLVRTM
Sbjct: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQENYEQAVTLVRTM 660

Query: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720
           GYAPFQVSERQWTELFEGN DRI RNNLKQLL ALGDCDASEATVSNLSRSLQSLCKF I
Sbjct: 661 GYAPFQVSERQWTELFEGNKDRICRNNLKQLLDALGDCDASEATVSNLSRSLQSLCKFGI 720

Query: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMS 780
            E+TSQS+ACD +ATD L+LPDS+NMENMKLHPD+DESLDIIPVDHASLNMKVNSES MS
Sbjct: 721 LESTSQSIACDLNATDGLKLPDSKNMENMKLHPDQDESLDIIPVDHASLNMKVNSESNMS 780

Query: 781 PWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNE 840
           PWS SISDG LGTGQFSD SNN HS FD   ESEDDE ELN LLD FDD+YDSNLPA NE
Sbjct: 781 PWSPSISDGVLGTGQFSDSSNNEHSTFDSWDESEDDEVELNMLLDGFDDSYDSNLPAANE 840

Query: 841 ILETWKEERKADGLFLHSLN 861
           ILETWKEERKADGLFLH LN
Sbjct: 841 ILETWKEERKADGLFLHPLN 860

[Close]
BLAST of CSPI06G28940 vs. NCBI nr
Match: XP_038881786.1 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 1521.1 bits (3937), Expect = 0.0e+00
Identity = 768/865 (88.79%), Postives = 807/865 (93.29%), Query Frame = 0 

Query: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
           MEAL++N+PIPSPKFEPD +KIKR L+ KGV+PTPRIVRSLRKKEIQKYNRKLKR+ ERQ
Sbjct: 1   MEALSTNSPIPSPKFEPDIEKIKRTLVHKGVHPTPRIVRSLRKKEIQKYNRKLKRLTERQ 60

Query: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
           + QSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVN KEL
Sbjct: 61  ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120

Query: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
           TG RTGYNRD+LKKESLRELRKLFE RKLEE QW LDDDVELKEEWLESEND  D ++RR
Sbjct: 121 TGFRTGYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKEEWLESENDHRDAMERR 180

Query: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGDGEVIRFLVDRLSS PISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSHSKSRFVYTKLLAVLGM+RKPQEALQIF+LMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMSRKPQEALQIFHLMRGDGQIYPDMAAYHSIA 300

Query: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLKV+E MRQQPS+KVRNKCRKSWDPAVEPDLV+YNAILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVVECMRQQPSRKVRNKCRKSWDPAVEPDLVVYNAILNACIPTLEWK 360

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420
           GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLH LFTK+KK+G+TLKANTYRVLV
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKLKKSGETLKANTYRVLV 420

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480
           KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNG+WQDALVEVEKMKTLSHM
Sbjct: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHM 480

Query: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540
           KPLVVTFTGMI SSF+GGHIDDCISIFEYMKQ CAPNIGTIN+MLKVYGRNDM+ KAKDL
Sbjct: 481 KPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINSMLKVYGRNDMFLKAKDL 540

Query: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600
           FEEIKRKAD SSH SAVPSLVPDEYTY SMLEAAAS+LQWEYFE+VYREMALSGY+LDQS
Sbjct: 541 FEEIKRKADCSSHSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDQS 600

Query: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660
           KHA LLVEAS+AGKWYLLDHAFD+ILEAGQIPHPLLFTEMIL LTTQDNYEQAVTLVRTM
Sbjct: 601 KHARLLVEASRAGKWYLLDHAFDSILEAGQIPHPLLFTEMILHLTTQDNYEQAVTLVRTM 660

Query: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720
           GYAPFQVSERQWTELFEGN DRI   NLK+LL ALG+CDASEATVSNLSRSLQSLCK  I
Sbjct: 661 GYAPFQVSERQWTELFEGNRDRICWKNLKKLLDALGNCDASEATVSNLSRSLQSLCKLGI 720

Query: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDE-----DESLDIIPVDHASLNMKVNS 780
           PENTSQSVACDHD TD LQLP SEN ENMKLHPD      DESLDIIPV+HASLNMKV S
Sbjct: 721 PENTSQSVACDHDVTDGLQLPGSENTENMKLHPDRVTDCCDESLDIIPVNHASLNMKVKS 780

Query: 781 ESKMSPWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNL 840
           +S++SPWS S S+G LGT QFSD S N  S  DLC +SEDDEE LN LLD FDD+YDSNL
Sbjct: 781 DSEVSPWSQSSSEGVLGTDQFSDRSINELSTIDLCDDSEDDEEGLNMLLDGFDDSYDSNL 840

Query: 841 PAVNEILETWKEERKADGLFLHSLN 861
           P+VNEIL+TWKEERK DGLFLH LN
Sbjct: 841 PSVNEILKTWKEERKTDGLFLHPLN 865

[Close]
BLAST of CSPI06G28940 vs. NCBI nr
Match: XP_038881784.1 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1513.8 bits (3918), Expect = 0.0e+00
Identity = 768/873 (87.97%), Postives = 807/873 (92.44%), Query Frame = 0 

Query: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
           MEAL++N+PIPSPKFEPD +KIKR L+ KGV+PTPRIVRSLRKKEIQKYNRKLKR+ ERQ
Sbjct: 1   MEALSTNSPIPSPKFEPDIEKIKRTLVHKGVHPTPRIVRSLRKKEIQKYNRKLKRLTERQ 60

Query: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
           + QSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVN KEL
Sbjct: 61  ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120

Query: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
           TG RTGYNRD+LKKESLRELRKLFE RKLEE QW LDDDVELKEEWLESEND  D ++RR
Sbjct: 121 TGFRTGYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKEEWLESENDHRDAMERR 180

Query: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGDGEVIRFLVDRLSS PISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMR--------GDGQIYPD 300
           VVEWVYNLKSHSHSKSRFVYTKLLAVLGM+RKPQEALQIF+LMR        GDGQIYPD
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMSRKPQEALQIFHLMRICYSYLIQGDGQIYPD 300

Query: 301 MAAYHSIAVTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNA 360
           MAAYHSIAVTLGQAGLLKQLLKV+E MRQQPS+KVRNKCRKSWDPAVEPDLV+YNAILNA
Sbjct: 301 MAAYHSIAVTLGQAGLLKQLLKVVECMRQQPSRKVRNKCRKSWDPAVEPDLVVYNAILNA 360

Query: 361 CIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLK 420
           CIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLH LFTK+KK+G+TLK
Sbjct: 361 CIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKLKKSGETLK 420

Query: 421 ANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVE 480
           ANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNG+WQDALVEVE
Sbjct: 421 ANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVE 480

Query: 481 KMKTLSHMKPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRND 540
           KMKTLSHMKPLVVTFTGMI SSF+GGHIDDCISIFEYMKQ CAPNIGTIN+MLKVYGRND
Sbjct: 481 KMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINSMLKVYGRND 540

Query: 541 MYSKAKDLFEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMAL 600
           M+ KAKDLFEEIKRKAD SSH SAVPSLVPDEYTY SMLEAAAS+LQWEYFE+VYREMAL
Sbjct: 541 MFLKAKDLFEEIKRKADCSSHSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMAL 600

Query: 601 SGYQLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQ 660
           SGY+LDQSKHA LLVEAS+AGKWYLLDHAFD+ILEAGQIPHPLLFTEMIL LTTQDNYEQ
Sbjct: 601 SGYRLDQSKHARLLVEASRAGKWYLLDHAFDSILEAGQIPHPLLFTEMILHLTTQDNYEQ 660

Query: 661 AVTLVRTMGYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSL 720
           AVTLVRTMGYAPFQVSERQWTELFEGN DRI   NLK+LL ALG+CDASEATVSNLSRSL
Sbjct: 661 AVTLVRTMGYAPFQVSERQWTELFEGNRDRICWKNLKKLLDALGNCDASEATVSNLSRSL 720

Query: 721 QSLCKFDIPENTSQSVACDHDATDELQLPDSENMENMKLHPDE-----DESLDIIPVDHA 780
           QSLCK  IPENTSQSVACDHD TD LQLP SEN ENMKLHPD      DESLDIIPV+HA
Sbjct: 721 QSLCKLGIPENTSQSVACDHDVTDGLQLPGSENTENMKLHPDRVTDCCDESLDIIPVNHA 780

Query: 781 SLNMKVNSESKMSPWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEF 840
           SLNMKV S+S++SPWS S S+G LGT QFSD S N  S  DLC +SEDDEE LN LLD F
Sbjct: 781 SLNMKVKSDSEVSPWSQSSSEGVLGTDQFSDRSINELSTIDLCDDSEDDEEGLNMLLDGF 840

Query: 841 DDAYDSNLPAVNEILETWKEERKADGLFLHSLN 861
           DD+YDSNLP+VNEIL+TWKEERK DGLFLH LN
Sbjct: 841 DDSYDSNLPSVNEILKTWKEERKTDGLFLHPLN 873

[Close]
BLAST of CSPI06G28940 vs. NCBI nr
Match: XP_023543129.1 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1454.9 bits (3765), Expect = 0.0e+00
Identity = 740/862 (85.85%), Postives = 788/862 (91.42%), Query Frame = 0 

Query: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
           MEAL++N  +PSPKFEPD +KIKR LLQKGV+PTP+IVRSL KKEIQK+NRKLKR+AERQ
Sbjct: 1   MEALSTNASVPSPKFEPDIEKIKRTLLQKGVHPTPKIVRSLCKKEIQKHNRKLKRLAERQ 60

Query: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
            AQSPPLSESQKQLI EETHFLTLRSEYKEFSKAIEA+PAGGLMVGRPWERLERVN KEL
Sbjct: 61  DAQSPPLSESQKQLIEEETHFLTLRSEYKEFSKAIEARPAGGLMVGRPWERLERVNLKEL 120

Query: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
           TG RT YNRD+LKKESLRELRKLFE RKLEE QW LDDDVELKEEWL SEN + D VKRR
Sbjct: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKEEWLGSENGQSDAVKRR 180

Query: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGDGEVIRFLVDRLSS PISMRDWKFSRMMI+SGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIQSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSHSKSRFVYTKLLAVLG ARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGKARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300

Query: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLK+IE MRQQPSKKVRN CRK WDPAVEPDLVIYNAILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKIIECMRQQPSKKVRNMCRKYWDPAVEPDLVIYNAILNACIPTLEWK 360

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420
            VYWVFTQLRK+GL+PNGATYGLSMEVMLKSGKYEQ+H LFTKMK +G TLKANTYRVLV
Sbjct: 361 SVYWVFTQLRKNGLKPNGATYGLSMEVMLKSGKYEQVHMLFTKMKNSGSTLKANTYRVLV 420

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480
           KAFWEEGNV+GAIEAVRDMEQRGVVGSASVYYELACCLCY+G+WQDALVEVEKMKTLSHM
Sbjct: 421 KAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYHGRWQDALVEVEKMKTLSHM 480

Query: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540
           KPLVVTFTGMI SSF+GGHIDDCISIFEYMKQ CAPNIGTINTMLKV+GRNDM+SKAKDL
Sbjct: 481 KPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINTMLKVFGRNDMFSKAKDL 540

Query: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600
           +EEIKRKAD SS  SAV S+VPD+YTY SML+AAAS+ QWEYFE+VYREMALSGY+LDQS
Sbjct: 541 YEEIKRKADHSSQSSAVSSIVPDQYTYDSMLQAAASAQQWEYFENVYREMALSGYRLDQS 600

Query: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660
           KHA+LLVEAS+AGKWYLLDHAFDTILEAGQIPHPLLFTE+ILQLTTQDNYEQAVTLVRTM
Sbjct: 601 KHAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTELILQLTTQDNYEQAVTLVRTM 660

Query: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720
            YAPFQVSERQWTE+FEGNTDRI  NNLK+L  AL DCDASEATVSNLSRSLQ LCK  I
Sbjct: 661 SYAPFQVSERQWTEVFEGNTDRICWNNLKKLSDALSDCDASEATVSNLSRSLQPLCKRGI 720

Query: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDE-----DESLDIIPVDHASLNMKVNS 780
           PENTSQS+  DHD TD LQLP SENMENMKLH D      + SLDIIPV+HASL    N 
Sbjct: 721 PENTSQSIVSDHDTTDGLQLPGSENMENMKLHLDHVTDCCEGSLDIIPVNHASL----NC 780

Query: 781 ESKMSPWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNL 840
           +SKM PWS+S+SDG L TG+FSD SNN  S FDL  +SEDDEEEL+ LLD FDD YDSNL
Sbjct: 781 DSKMPPWSLSLSDGVLETGKFSDRSNNERSTFDLRDDSEDDEEELSMLLDGFDDPYDSNL 840

Query: 841 PAVNEILETWKEERKADGLFLH 858
           P+V+EIL+TWKEERK DGL+LH
Sbjct: 841 PSVDEILKTWKEERKNDGLYLH 858

[Close]
BLAST of CSPI06G28940 vs. TAIR 10
Match: AT5G67570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 837.4 bits (2162), Expect = 1.0e-242
Identity = 421/709 (59.38%), Postives = 548/709 (77.29%), Query Frame = 0 

Query: 13  PKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQSAQSPPLSESQK 72
           P+FEPD +KIKR LL+ GV PTP+I+ +LRKKEIQK+NR+ KR  E   +++   +E+QK
Sbjct: 17  PEFEPDMEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETE---SEAEVYTEAQK 76

Query: 73  QLIAEETHFLTLRSEYKEFSKAIEAKPAG--GLMVGRPWERLERVNFKEL-TGV-RTGYN 132
           Q + EE  F TLR EYK+F+++I  K  G  GLMVG PWE +ERV  KEL +GV R   +
Sbjct: 77  QSMEEEARFQTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVS 136

Query: 133 RDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRRRGDGEVIR 192
              LKKE+L+EL+K+ E    ++ +W LDDDV+++E  L+ E   +D  KR R +GE +R
Sbjct: 137 AGELKKENLKELKKILE----KDLRWVLDDDVDVEEFDLDKE---FDPAKRWRNEGEAVR 196

Query: 193 FLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNL 252
            LVDRLS   I+ + WKF RMM +SGLQF E Q+LKI+D LG K  WKQA +VV WVY+ 
Sbjct: 197 VLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSD 256

Query: 253 KSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGL 312
           K   H +SRFVYTKLL+VLG AR+PQEALQIFN M GD Q+YPDMAAYH IAVTLGQAGL
Sbjct: 257 KKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGL 316

Query: 313 LKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQ 372
           LK+LLKVIE MRQ+P+K  +N  +K+WDP +EPDLV+YNAILNAC+PTL+WK V WVF +
Sbjct: 317 LKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVE 376

Query: 373 LRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGN 432
           LRK+GLRPNGATYGL+MEVML+SGK++++H+ F KMK +G+  KA TY+VLV+A W EG 
Sbjct: 377 LRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGK 436

Query: 433 VNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFT 492
           +  A+EAVRDMEQ+GV+G+ SVYYELACCLC NG+W DA++EV +MK L + +PL +TFT
Sbjct: 437 IEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFT 496

Query: 493 GMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDLFEEIKRKA 552
           G+I++S NGGH+DDC++IF+YMK  C PNIGT N MLKVYGRNDM+S+AK+LFEEI  + 
Sbjct: 497 GLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRK 556

Query: 553 DSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALLLVE 612
           ++         LVP+EYTY+ MLEA+A SLQWEYFE VY+ M LSGYQ+DQ+KHA +L+E
Sbjct: 557 ET--------HLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIE 616

Query: 613 ASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTMGYAPFQVS 672
           AS+AGKW LL+HAFD +LE G+IPHPL FTE++   T + ++++A+TL+ T+  A FQ+S
Sbjct: 617 ASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQIS 676

Query: 673 ERQWTELFEGNTDRIRRNNLKQLLHALGDCD-ASEATVSNLSRSLQSLC 717
           E +WT+LFE + D + ++NL +L   L +CD  SE TVSNLS+SL+S C
Sbjct: 677 EEEWTDLFEEHQDWLTQDNLHKLSDHLIECDYVSEPTVSNLSKSLKSRC 707

[Close]
BLAST of CSPI06G28940 vs. TAIR 10
Match: AT1G30610.2 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 362.1 bits (928), Expect = 1.3e-99
Identity = 180/470 (38.30%), Postives = 291/470 (61.91%), Query Frame = 0 

Query: 187 IRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVY 246
           I  L   L+   I+M +W+FS+ +  + +++ +  +++++  LG  G W++ L V+EW+ 
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496

Query: 247 NLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQA 306
               +  +K R +YT  L VLG +R+P EAL +F+ M      YPDM AY SIAVTLGQA
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556

Query: 307 GLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVF 366
           G +K+L  VI+ MR  P KK +    + WDP +EPD+V+YNA+LNAC+   +W+G +WV 
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616

Query: 367 TQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEE 426
            QL++ G +P+  TYGL MEVML   KY  +H  F KM+K+     A  YRVLV   W+E
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKS-SIPNALAYRVLVNTLWKE 676

Query: 427 GNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVT 486
           G  + A+  V DME RG+VGSA++YY+LA CLC  G+  + L  ++K+  +++ KPLVVT
Sbjct: 677 GKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVAN-KPLVVT 736

Query: 487 FTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDLFEEIKR 546
           +TG+I +  + G+I +   IF+ MK++C+PN+ T N MLK Y +  ++ +A++LF+++  
Sbjct: 737 YTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSE 796

Query: 547 KADSSSHDSAVPS-LVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALL 606
             +   + S   S ++PD YT+ +ML+  A   +W+ F   YREM   GY  +  +H  +
Sbjct: 797 DGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRM 856

Query: 607 LVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVT 656
           ++EAS+AGK  +++  ++ +  + +IP   L  E   +   + ++  A++
Sbjct: 857 VLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAIS 904

[Close]
BLAST of CSPI06G28940 vs. TAIR 10
Match: AT1G30610.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 350.5 bits (898), Expect = 3.8e-96
Identity = 181/497 (36.42%), Postives = 290/497 (58.35%), Query Frame = 0 

Query: 187 IRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVY 246
           I  L   L+   I+M +W+FS+ +  + +++ +  +++++  LG  G W++ L V+EW+ 
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496

Query: 247 NLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQA 306
               +  +K R +YT  L VLG +R+P EAL +F+ M      YPDM AY SIAVTLGQA
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556

Query: 307 GLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVF 366
           G +K+L  VI+ MR  P KK +    + WDP +EPD+V+YNA+LNAC+   +W+G +WV 
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616

Query: 367 TQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEE 426
            QL++ G +P+  TYGL MEVML   KY  +H  F KM+K+     A  YRVLV   W+E
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKS-SIPNALAYRVLVNTLWKE 676

Query: 427 GNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDAL-----VEVEKMKTLSHM- 486
           G  + A+  V DME RG+VGSA++YY+LA CLC  G+  + L     V    +K + ++ 
Sbjct: 677 GKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLI 736

Query: 487 ---------------------KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIG 546
                                KPLVVT+TG+I +  + G+I +   IF+ MK++C+PN+ 
Sbjct: 737 YKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLV 796

Query: 547 TINTMLKVYGRNDMYSKAKDLFEEIKRKADSSSHDSAVPS-LVPDEYTYASMLEAAASSL 606
           T N MLK Y +  ++ +A++LF+++    +   + S   S ++PD YT+ +ML+  A   
Sbjct: 797 TCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQE 856

Query: 607 QWEYFESVYREMALSGYQLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFT 656
           +W+ F   YREM   GY  +  +H  +++EAS+AGK  +++  ++ +  + +IP   L  
Sbjct: 857 KWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIK 916

[Close]
BLAST of CSPI06G28940 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 7.6e-28
Identity = 98/418 (23.44%), Postives = 179/418 (42.82%), Query Frame = 0 

Query: 221 QLLKILDALGAKGCWKQALSVVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIF 280
           +LL  L  LG    +  AL   +W    K +       V   ++++LG   +   A  +F
Sbjct: 137 ELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMF 196

Query: 281 NLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIEFMRQQ------------------ 340
           N ++ DG    D+ +Y S+      +G  ++ + V + M +                   
Sbjct: 197 NGLQEDG-FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 256

Query: 341 ---PSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGA 400
              P  K+ +   K     + PD   YN ++  C      +    VF +++ +G   +  
Sbjct: 257 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 316

Query: 401 TYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGNVNGAIEAVRDM 460
           TY   ++V  KS + ++   +  +M  NG +    TY  L+ A+  +G ++ A+E    M
Sbjct: 317 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 376

Query: 461 EQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGH 520
            ++G       Y  L       GK + A+   E+M+  +  KP + TF   I    N G 
Sbjct: 377 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN-AGCKPNICTFNAFIKMYGNRGK 436

Query: 521 IDDCISIFEYMKQIC--APNIGTINTMLKVYGRNDMYSKAKDLFEEIKRKADSSSHDSAV 580
             + + IF+ +  +C  +P+I T NT+L V+G+N M S+   +F+E+KR           
Sbjct: 437 FTEMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR----------- 496

Query: 581 PSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALLLVEASKAGKW 616
              VP+  T+ +++ A +    +E   +VYR M  +G   D S +  +L   ++ G W
Sbjct: 497 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540

[Close]
BLAST of CSPI06G28940 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 5.8e-20
Identity = 97/444 (21.85%), Postives = 188/444 (42.34%), Query Frame = 0 

Query: 236 KQALSVVEWVYNLKSHSH-SKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMA 295
           K+ +S  E V+     S  S + F Y  L+     A     AL +F+ M   G + P++ 
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL-PNVV 242

Query: 296 AYHSIAVTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACI 355
            Y+++   +     L+++    + +R    K             +EP+L+ YN ++N   
Sbjct: 243 TYNTL---IDGYCKLRKIDDGFKLLRSMALK------------GLEPNLISYNVVINGLC 302

Query: 356 PTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKAN 415
                K V +V T++ + G   +  TY   ++   K G + Q   +  +M ++G T    
Sbjct: 303 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 362

Query: 416 TYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKM 475
           TY  L+ +  + GN+N A+E +  M  RG+  +   Y  L       G   +A   + +M
Sbjct: 363 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 422

Query: 476 KTLSHMKPLVVTFTGMISSSFNGGHIDDCISIFEYMKQI-CAPNIGTINTMLKVYGRNDM 535
              +   P VVT+  +I+     G ++D I++ E MK+   +P++ + +T+L  + R+  
Sbjct: 423 ND-NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 482

Query: 536 YSKAKDLFEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALS 595
             +A  +  E+  K            + PD  TY+S+++      + +    +Y EM   
Sbjct: 483 VDEALRVKREMVEK-----------GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 542

Query: 596 GYQLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 655
           G   D+  +  L+      G         + ++E G +P  + ++ +I  L  Q    +A
Sbjct: 543 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 598

Query: 656 VTLVRTMGYAPFQVSERQWTELFE 678
             L+  + Y     S+  +  L E
Sbjct: 603 KRLLLKLFYEESVPSDVTYHTLIE 598

The following BLAST results are available for this feature:
BLAST of CSPI06G28940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FJW61.4e-24159.38Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidop... [more]
Q9SA765.3e-9536.42Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidop... [more]
Q9LYZ91.1e-2623.44Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Q9FIX38.2e-1921.85Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q9S7Q23.1e-1823.17Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
BLAST of CSPI06G28940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFY80.0e+00100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495690 PE=4 SV=1[more]
A0A5D3CLI00.0e+0093.84Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B1270.0e+0093.84pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucumis ... [more]
A0A6J1ILT70.0e+0085.27pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucurbit... [more]
A0A6J1GG290.0e+0085.27pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucurbit... [more]
BLAST of CSPI06G28940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141982.10.0e+00100.00pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucumis sa... [more]
XP_008440398.10.0e+0093.84PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic ... [more]
XP_038881786.10.0e+0088.79pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X2 ... [more]
XP_038881784.10.0e+0087.97pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X1 ... [more]
XP_023543129.10.0e+0085.85pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucurbita ... [more]
BLAST of CSPI06G28940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G67570.11.0e-24259.38Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G30610.21.3e-9938.30pentatricopeptide (PPR) repeat-containing protein [more]
AT1G30610.13.8e-9636.42pentatricopeptide (PPR) repeat-containing protein [more]
AT5G02860.17.6e-2823.44Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G39710.15.8e-2021.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 520..546
e-value: 8.6E-5
score: 20.5
coord: 259..287
e-value: 0.001
score: 17.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 415..444
e-value: 0.32
score: 11.3
coord: 259..287
e-value: 0.028
score: 14.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 480..531
e-value: 1.3E-5
score: 25.2
coord: 339..383
e-value: 0.0013
score: 18.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 342..376
score: 9.273317
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 517..547
score: 8.867749
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 412..446
score: 8.582755
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 469..550
e-value: 2.3E-11
score: 45.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 555..792
e-value: 4.0E-9
score: 38.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 198..356
e-value: 1.6E-17
score: 65.5
coord: 357..468
e-value: 4.2E-15
score: 57.5
NoneNo IPR availablePANTHERPTHR46935:SF2OS05G0315100 PROTEINcoord: 1..857
IPR044645Pentatricopeptide repeat-containing protein DG1/EMB2279-likePANTHERPTHR46935OS01G0674700 PROTEINcoord: 1..857

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G28940.1CSPI06G28940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding