CSPI06G28840 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G28840
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Formin-like protein 6
Location	Chr6: 25126255 .. 25127106 (+)
RNA-Seq Expression	CSPI06G28840
Synteny	CSPI06G28840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATTTCTTTTCTCATCTTCATTCTCAGTTTAGATTTCTTCGTTGTTCTCAATCATCTTCGCGTCAATGGCGATAGTTGGAGAAGAAGTTTGCACCAGCCATTGGATCCTGCCACATTCTCATCGCCACCCTCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCTCTTGAGTCTGCACATTCCGACCAGCCTACGCCTGCCCCTTCCAATGTCTCTCTGCCTAATCTACCCTCGTCTGGACAACAATCTTTTAAACCAATTAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTATATCGGCAGCGGATTAAGTACCGATACAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCATGATTCTGGTATCCCACCGTCGAGTTTCTTGAATTACGGAACCATGGAACGGAGGCCGGGCTCGATCGTCGAGCGGAAGGGTGGGAAGGGAGAAGACGGATCCTCGCCGGATCGGCGGGTGGATTCTGTTAAAAAATTGGATTTCCACCTTCTTAGCCCGGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCATTGTCTGATGATGAGAGCCGAGAAACAGTGTTTCACACGCCGGAGTGGGCGGCGGCGGTTCCCTACAGCGGTGGTAAAAGAGAATCTCGCAACAACTCGCTCAGTGTTAAACCCAAAGAAGGAACTTCTCCTCTACCTTATTTAGAGGATTCGTTGATAAAACAGGATCATCGACGGCCGGCAGCGTCTCCGCCGCCACATCCGACAACAACGTAA

mRNA sequence

ATGAAAATTTCTTTTCTCATCTTCATTCTCAGTTTAGATTTCTTCGTTGTTCTCAATCATCTTCGCGTCAATGGCGATAGTTGGAGAAGAAGTTTGCACCAGCCATTGGATCCTGCCACATTCTCATCGCCACCCTCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCTCTTGAGTCTGCACATTCCGACCAGCCTACGCCTGCCCCTTCCAATGTCTCTCTGCCTAATCTACCCTCGTCTGGACAACAATCTTTTAAACCAATTAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTATATCGGCAGCGGATTAAGTACCGATACAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCATGATTCTGGTATCCCACCGTCGAGTTTCTTGAATTACGGAACCATGGAACGGAGGCCGGGCTCGATCGTCGAGCGGAAGGGTGGGAAGGGAGAAGACGGATCCTCGCCGGATCGGCGGGTGGATTCTGTTAAAAAATTGGATTTCCACCTTCTTAGCCCGGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCATTGTCTGATGATGAGAGCCGAGAAACAGTGTTTCACACGCCGGAGTGGGCGGCGGCGGTTCCCTACAGCGGTGGTAAAAGAGAATCTCGCAACAACTCGCTCAGTGTTAAACCCAAAGAAGGAACTTCTCCTCTACCTTATTTAGAGGATTCGTTGATAAAACAGGATCATCGACGGCCGGCAGCGTCTCCGCCGCCACATCCGACAACAACGTAA

Coding sequence (CDS)

ATGAAAATTTCTTTTCTCATCTTCATTCTCAGTTTAGATTTCTTCGTTGTTCTCAATCATCTTCGCGTCAATGGCGATAGTTGGAGAAGAAGTTTGCACCAGCCATTGGATCCTGCCACATTCTCATCGCCACCCTCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCTCTTGAGTCTGCACATTCCGACCAGCCTACGCCTGCCCCTTCCAATGTCTCTCTGCCTAATCTACCCTCGTCTGGACAACAATCTTTTAAACCAATTAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTATATCGGCAGCGGATTAAGTACCGATACAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCATGATTCTGGTATCCCACCGTCGAGTTTCTTGAATTACGGAACCATGGAACGGAGGCCGGGCTCGATCGTCGAGCGGAAGGGTGGGAAGGGAGAAGACGGATCCTCGCCGGATCGGCGGGTGGATTCTGTTAAAAAATTGGATTTCCACCTTCTTAGCCCGGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCATTGTCTGATGATGAGAGCCGAGAAACAGTGTTTCACACGCCGGAGTGGGCGGCGGCGGTTCCCTACAGCGGTGGTAAAAGAGAATCTCGCAACAACTCGCTCAGTGTTAAACCCAAAGAAGGAACTTCTCCTCTACCTTATTTAGAGGATTCGTTGATAAAACAGGATCATCGACGGCCGGCAGCGTCTCCGCCGCCACATCCGACAACAACGTAA

Protein sequence

MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPSPPPPPPPPPPPLESAHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDSVKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGGKRESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT*

Homology

[Close]

BLAST of CSPI06G28840 vs. ExPASy Swiss-Prot
Match: Q9FJX6 (Formin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=FH6 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23
Identity = 114/313 (36.42%), Postives = 155/313 (49.52%), Query Frame = 0


Query: 14  FFVVLNHLRVNGDSWRRSLHQPL-------DPATFSSPPSPPPPPPP--------PPPPL 73
           FF +   + V+ ++ RR LHQPL        P  F S PSPP P  P        P  P 
Sbjct: 13  FFYIFFSVSVSSEAHRRILHQPLFPESSTPPPPDFQSTPSPPLPDTPDQPFFPENPSTPQ 72

Query: 74  ESAHSDQPTPAPSNVS--LPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQ 133
           ++     P P  ++V+  LP +P++  QS KP K + IV SV IVTLGMLSALAFFLYR 
Sbjct: 73  QTLFPPPPPPVSADVNGGLP-IPTATTQSAKPGKKVAIVISVGIVTLGMLSALAFFLYRH 132

Query: 134 RIKYRYKSRMLV----EKERSLSFRHDSGIP---PSSFLNYGTMERRPGSIVERKGG-KG 193
           + K+   ++ LV    +   S  F+ DSG P    S+FL  GT+E    S  E  GG  G
Sbjct: 133 KAKHASDTQKLVTGGGDGGGSRRFQEDSGPPTTTSSTFLYMGTVEPTRVSASESNGGTNG 192

Query: 194 EDGSSPDRRVDSVKKLDFHLLSPELQPLPPLS---QNQIVNPSFETPLSD---DESRETV 253
              SSP R+++S K+ + +  SPELQPLPPL+   Q    +PS  +P S    +E R+T 
Sbjct: 193 PVNSSPYRKLNSAKRSERYRPSPELQPLPPLAKPPQPSDNSPSALSPSSSSSGEECRDTA 252

Query: 254 FHTPEWAA---------AVPYSG------GKRESRNNSLSVKPKEGTSPLPYLEDSLIKQ 279
           F+TP  +A         A P S        KR S  +     P    S  P ++  +I  
Sbjct: 253 FYTPHGSAISSDDGYYTAFPRSANGSLPHSKRTSPRSKFGSAPTTAASRSPEMKHVIIPS 312

[Close]

BLAST of CSPI06G28840 vs. ExPASy Swiss-Prot
Match: Q10Q99 (Formin-like protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=FH8 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 75/269 (27.88%), Postives = 111/269 (41.26%), Query Frame = 0


Query: 23  VNGDSWRRSLHQPLDPATFSSPPSPPPPP----------------------PPPPPPLES 82
           V G S RR LHQPL P  ++ PPSPPPPP                      PP PP   +
Sbjct: 29  VGGGSARRVLHQPLFPIEWTPPPSPPPPPAPDFTSDPSTPPAPDAPSGDFFPPAPPTTTT 88

Query: 83  AHSDQPTPAPSNVS-----LPNLPSSGQQSFKPIK-TLGIVCSVAIVTLGMLSALAFFLY 142
             S   TP+P+ V+      P+   SG     P K T+    + A   + +L     FL 
Sbjct: 89  PTSPGTTPSPTTVAADVSKTPSGSGSGHHGGGPTKATIVAAGAGAAAAVALLGFACAFLI 148

Query: 143 RQRIKYRYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGED-GSS 202
             R + R  S+ L+  +R+ + R  +    + FL  GT+E  P +     G    D   S
Sbjct: 149 TGRARRRGDSQKLLGPDRAGAHR-SAATSAADFLYVGTVE--PTTPARHHGPTTADLVGS 208

Query: 203 PDRRVDSVKKL-------DFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTP 256
           P R++ S +         D    SPEL+PLPPL +   +            S E  ++TP
Sbjct: 209 PYRKLRSERARRGVSRDEDADHPSPELRPLPPLRRAATLG----------SSDEDGYYTP 268

[Close]

BLAST of CSPI06G28840 vs. ExPASy TrEMBL
Match: A0A0A0KIH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495090 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 6.8e-151
Identity = 282/283 (99.65%), Postives = 282/283 (99.65%), Query Frame = 0


Query: 1   MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPSPPPPPPPPPPPLES 60
           MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPS PPPPPPPPPPLES
Sbjct: 1   MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPS-PPPPPPPPPPLES 60

Query: 61  AHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKY 120
           AHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKY
Sbjct: 61  AHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKY 120

Query: 121 RYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDS 180
           RYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDS
Sbjct: 121 RYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDS 180

Query: 181 VKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGGKRE 240
           VKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGGKRE
Sbjct: 181 VKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGGKRE 240

Query: 241 SRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 284
           SRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT
Sbjct: 241 SRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 282

[Close]

BLAST of CSPI06G28840 vs. ExPASy TrEMBL
Match: A0A5A7SYW9 (Formin-like protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004100 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.1e-139
Identity = 268/283 (94.70%), Postives = 269/283 (95.05%), Query Frame = 0


Query: 1   MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPSPPPPPPPPPPPLES 60
           MKISFLIFILSLD  VVLNHLRVN DSWRRSLHQPLDPATFSSPPS   PPPPPPPPLES
Sbjct: 1   MKISFLIFILSLDSLVVLNHLRVNADSWRRSLHQPLDPATFSSPPS---PPPPPPPPLES 60

Query: 61  AHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKY 120
           AHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKY
Sbjct: 61  AHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKY 120

Query: 121 RYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDS 180
           RYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSI ERKG KGED SSPDRRVDS
Sbjct: 121 RYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIDERKGRKGEDESSPDRRVDS 180

Query: 181 VKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGGKRE 240
           VKKLD HLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGGKRE
Sbjct: 181 VKKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGGKRE 240

Query: 241 SRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 284
           SRNN LSV+PK GTSPLPYLE SLIKQDHRRPAASPPPHPT T
Sbjct: 241 SRNNLLSVEPK-GTSPLPYLEGSLIKQDHRRPAASPPPHPTAT 279

[Close]

BLAST of CSPI06G28840 vs. ExPASy TrEMBL
Match: A0A6J1L3D7 (Formin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111499540 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 7.6e-33
Identity = 124/298 (41.61%), Postives = 155/298 (52.01%), Query Frame = 0


Query: 2   KISFLIFILSL--DFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPP----SPPPPPPP-- 61
           ++SF IF LSL   F      LR +G S RR LHQPL P     PP    +PPPPPPP  
Sbjct: 5   RLSFFIFSLSLFTSFIGAFPRLRDSGISTRRILHQPLFPIGSEPPPDIELTPPPPPPPDS 64

Query: 62  ----PP---PPLESAHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGML 121
               PP    P  +    QP P  +N ++P +P++  Q  KP KT+ I  SV IVTLGML
Sbjct: 65  TSNVPPFFHDPPTTQDQTQPPPPSTNGTMP-IPAATAQQSKPTKTVAIAISVGIVTLGML 124

Query: 122 SALAFFLYRQRIKYRYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGG 181
           SALAFFLYR R K+  +S+ LV       F  DS  PPSSF   GT+E    S+VE+ G 
Sbjct: 125 SALAFFLYRHRAKHPGESQKLVGGSNPERFPEDSRAPPSSFFYIGTVEPSQSSVVEQNGA 184

Query: 182 KGEDGSSPDRRVDSVKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTP 241
                SSP R+++S+K  D +  SPELQPLPPL +  +         SDDES+ T FHTP
Sbjct: 185 ----NSSPYRKLNSIKMSDRYRPSPELQPLPPLPKPPMAMSPPALSSSDDESQNTAFHTP 244

Query: 242 EWAAAVPYSGGK-RESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 284
           + ++ V +  G    +   S SVK     S          K DH    A P PH   T
Sbjct: 245 QCSSIVSHDDGYFSPASRRSNSVKSCSTAS---------FKNDHMNSNAPPVPHSKRT 288

[Close]

BLAST of CSPI06G28840 vs. ExPASy TrEMBL
Match: A0A6J1G6X4 (Formin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111451385 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 6.4e-32
Identity = 123/296 (41.55%), Postives = 155/296 (52.36%), Query Frame = 0


Query: 2   KISFLIFILSL--DFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPP----SPPPPPPPP- 61
           ++SF IF LSL   F      LR +  S RR LHQPL P     PP    +PPPPP  P 
Sbjct: 5   RLSFFIFSLSLFTSFIGAFPLLRDSAISTRRILHQPLFPIGSEPPPDIELTPPPPPDSPS 64

Query: 62  --PP----PLESAHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSA 121
             PP    P  +    QP P  +N ++P +P++  Q  KP KT+ I  SV IVTLGMLSA
Sbjct: 65  DVPPFFHDPPTTQDQTQPPPPSTNGTMP-IPAATAQQSKPTKTVAIAISVGIVTLGMLSA 124

Query: 122 LAFFLYRQRIKYRYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKG 181
           LAFFLYR R K+  +S+ LV       F  DS  PPSSF   GT+E    S+VE+ G  G
Sbjct: 125 LAFFLYRHRAKHPGESQKLVGGSNPERFPEDSRAPPSSFFYIGTVEPSQSSVVEQNGANG 184

Query: 182 EDGSSPDRRVDSVKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEW 241
            + SSP R+++S+K  D +  SPELQPLPPL +  +         SDDES+ T FHTP+ 
Sbjct: 185 AN-SSPYRKLNSIKMSDRYRPSPELQPLPPLPKPPMAMSPPALSSSDDESQNTAFHTPQC 244

Query: 242 AAAVPYSGGK-RESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 284
           ++ V +  G    +   S SVK     S          K DH    A P PH   T
Sbjct: 245 SSIVSHDDGYFSPASRRSNSVKSCSTAS---------FKNDHMNSNAPPIPHSKRT 289

[Close]

BLAST of CSPI06G28840 vs. ExPASy TrEMBL
Match: A0A5A7TWW5 (Formin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00900 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-31
Identity = 115/290 (39.66%), Postives = 153/290 (52.76%), Query Frame = 0


Query: 27  SWRRSLHQPLDPATFSSPP----SPPPPPPPPPPPLE---------SAHSDQPTPAPSNV 86
           S+RR LHQPL P     PP    SPPPPPPP  P  +         S    QP P+ SN 
Sbjct: 35  SYRRILHQPLFPIGSEPPPEIEFSPPPPPPPDSPADDQPFFHELPTSPDQSQPPPSSSNG 94

Query: 87  SLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRYKSRMLVEKERS 146
           ++P +P++  Q  KP KT+ I  SV IVTLGMLSALAFFLYR R K+  +S+ LV    +
Sbjct: 95  TMP-IPAATAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGSNN 154

Query: 147 LS-FRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDSVKKLDFHLLSPE 206
              F  DS  PPSSF   GT+E    S+VE+ G  G + SSP R+++S+K+ D +  SPE
Sbjct: 155 PERFMEDSRAPPSSFFYIGTVEPSQSSVVEQNGANGAN-SSPYRKLNSIKRSDRYRPSPE 214

Query: 207 LQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGG---KRESRNNSLS-- 266
           LQPLPPL +  +V        SD+ES +T FHTP+ ++ V +  G       R+NS+   
Sbjct: 215 LQPLPPLPKPPVVMSPPALSSSDEESLDTAFHTPQCSSIVSHEDGYFSPASRRSNSVKSC 274

Query: 267 -----------------VKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHP 281
                            +   + TSP      S  K++  +P   PPP P
Sbjct: 275 STATYKNDHINSNPPPPIPHSKRTSPKSRFSVSSTKRNSSQPQPPPPPPP 322

[Close]

BLAST of CSPI06G28840 vs. NCBI nr
Match: KAA0036422.1 (Formin-like protein 6 [Cucumis melo var. makuwa] >TYK12818.1 Formin-like protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 505.0 bits (1299), Expect = 4.3e-139
Identity = 268/283 (94.70%), Postives = 269/283 (95.05%), Query Frame = 0


Query: 1   MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPSPPPPPPPPPPPLES 60
           MKISFLIFILSLD  VVLNHLRVN DSWRRSLHQPLDPATFSSPPS   PPPPPPPPLES
Sbjct: 1   MKISFLIFILSLDSLVVLNHLRVNADSWRRSLHQPLDPATFSSPPS---PPPPPPPPLES 60

Query: 61  AHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKY 120
           AHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKY
Sbjct: 61  AHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKY 120

Query: 121 RYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDS 180
           RYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSI ERKG KGED SSPDRRVDS
Sbjct: 121 RYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIDERKGRKGEDESSPDRRVDS 180

Query: 181 VKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGGKRE 240
           VKKLD HLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGGKRE
Sbjct: 181 VKKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGGKRE 240

Query: 241 SRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 284
           SRNN LSV+PK GTSPLPYLE SLIKQDHRRPAASPPPHPT T
Sbjct: 241 SRNNLLSVEPK-GTSPLPYLEGSLIKQDHRRPAASPPPHPTAT 279

[Close]

BLAST of CSPI06G28840 vs. NCBI nr
Match: KAE8647520.1 (hypothetical protein Csa_003054 [Cucumis sativus])

HSP 1 Score: 359.4 bits (921), Expect = 2.9e-95
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 105 MLSALAFFLYRQRIKYRYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERK 164
           MLSALAFFLYRQRIKYRYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERK
Sbjct: 1   MLSALAFFLYRQRIKYRYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERK 60

Query: 165 GGKGEDGSSPDRRVDSVKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFH 224
           GGKGEDGSSPDRRVDSVKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFH
Sbjct: 61  GGKGEDGSSPDRRVDSVKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFH 120

Query: 225 TPEWAAAVPYSGGKRESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 284
           TPEWAAAVPYSGGKRESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT
Sbjct: 121 TPEWAAAVPYSGGKRESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 179

[Close]

BLAST of CSPI06G28840 vs. NCBI nr
Match: KAG6594983.1 (Formin-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352.4 bits (903), Expect = 3.5e-93
Identity = 200/279 (71.68%), Postives = 216/279 (77.42%), Query Frame = 0


Query: 7   IFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPSPPPPPPPPPPPLESAHSDQP 66
           IF  SL  F++    RVNGDS RRSLHQPLDPATF S          PPPP  SA+SDQP
Sbjct: 7   IFFFSLQLFLLFIDPRVNGDSRRRSLHQPLDPATFVS----------PPPPGGSANSDQP 66

Query: 67  TPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRYKSRM 126
           TPAPSNVS+PNLPSS QQSFKPIKT+GIVCSVAIVTLGMLSALAFFLY QRIKYR KSRM
Sbjct: 67  TPAPSNVSMPNLPSSAQQSFKPIKTMGIVCSVAIVTLGMLSALAFFLYWQRIKYRCKSRM 126

Query: 127 LVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDSVKKLDF 186
           LV+KER LSFR DSGIP SSFLN+GTME+R  S VE KG  G+D S   RRVDSVKK D 
Sbjct: 127 LVDKERCLSFRADSGIPQSSFLNFGTMEQRSCSSVEPKGVNGQDESPAQRRVDSVKKWDS 186

Query: 187 HLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGG-----KRES 246
            LLSPEL PLPPL   QI NPSFET LSDDESRETVFHTPEW AAV Y GG     K+E+
Sbjct: 187 RLLSPELHPLPPLPHQQIGNPSFETTLSDDESRETVFHTPEWTAAVSYGGGIFPRSKKET 246

Query: 247 RNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHP 281
           R  S  +   +GTSPLPYL++SLIKQD+RRPAASPPP P
Sbjct: 247 RYGS-PIVHAQGTSPLPYLQESLIKQDYRRPAASPPPPP 274

[Close]

BLAST of CSPI06G28840 vs. NCBI nr
Match: XP_023532921.1 (formin-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-32
Identity = 122/296 (41.22%), Postives = 152/296 (51.35%), Query Frame = 0


Query: 2   KISFLIFILSL--DFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPP----SPPPPPPPPP 61
           ++SF IF LSL   F    + LR +  S RR LHQPL P     PP    +PPPPPP  P
Sbjct: 5   RLSFFIFFLSLFTSFIGAFSLLRDSAISTRRILHQPLFPIGSEPPPDIELTPPPPPPDSP 64

Query: 62  PPLESAHSDQPT-------PAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSA 121
             +     D PT       P PS      +P++  Q  KP KT+ I  SV IVTLGMLSA
Sbjct: 65  SDVPPFFHDPPTTQDQTQPPPPSTNGTMPIPAATAQQSKPTKTVAIAISVGIVTLGMLSA 124

Query: 122 LAFFLYRQRIKYRYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKG 181
           LAFFLYR R K+  +S+ LV       F  DS  PPSSF   GT+E    S+VE+ G  G
Sbjct: 125 LAFFLYRHRAKHPGESQKLVGGSNPERFPEDSRAPPSSFFYIGTVEPSQSSVVEQNGANG 184

Query: 182 EDGSSPDRRVDSVKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEW 241
            + SSP R+++S+K  D +  SPELQPLPPL +  +         SDDES+ T FHTP+ 
Sbjct: 185 AN-SSPYRKLNSIKMSDRYRPSPELQPLPPLPKPPMAMSPPALSSSDDESQNTAFHTPQC 244

Query: 242 AAAVPYSGGK-RESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 284
           ++ V +  G    +   S SVK     S          K DH    A P PH   T
Sbjct: 245 SSIVSHDDGYFSPASRRSNSVKSCSTAS---------FKNDHMNSNAPPIPHSKRT 290

[Close]

BLAST of CSPI06G28840 vs. NCBI nr
Match: XP_023006879.1 (formin-like protein 6 [Cucurbita maxima])

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-32
Identity = 124/298 (41.61%), Postives = 155/298 (52.01%), Query Frame = 0


Query: 2   KISFLIFILSL--DFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPP----SPPPPPPP-- 61
           ++SF IF LSL   F      LR +G S RR LHQPL P     PP    +PPPPPPP  
Sbjct: 5   RLSFFIFSLSLFTSFIGAFPRLRDSGISTRRILHQPLFPIGSEPPPDIELTPPPPPPPDS 64

Query: 62  ----PP---PPLESAHSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGML 121
               PP    P  +    QP P  +N ++P +P++  Q  KP KT+ I  SV IVTLGML
Sbjct: 65  TSNVPPFFHDPPTTQDQTQPPPPSTNGTMP-IPAATAQQSKPTKTVAIAISVGIVTLGML 124

Query: 122 SALAFFLYRQRIKYRYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGG 181
           SALAFFLYR R K+  +S+ LV       F  DS  PPSSF   GT+E    S+VE+ G 
Sbjct: 125 SALAFFLYRHRAKHPGESQKLVGGSNPERFPEDSRAPPSSFFYIGTVEPSQSSVVEQNGA 184

Query: 182 KGEDGSSPDRRVDSVKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTP 241
                SSP R+++S+K  D +  SPELQPLPPL +  +         SDDES+ T FHTP
Sbjct: 185 ----NSSPYRKLNSIKMSDRYRPSPELQPLPPLPKPPMAMSPPALSSSDDESQNTAFHTP 244

Query: 242 EWAAAVPYSGGK-RESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 284
           + ++ V +  G    +   S SVK     S          K DH    A P PH   T
Sbjct: 245 QCSSIVSHDDGYFSPASRRSNSVKSCSTAS---------FKNDHMNSNAPPVPHSKRT 288

[Close]

BLAST of CSPI06G28840 vs. TAIR 10
Match: AT5G67470.1 (formin homolog 6 )

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-24
Identity = 114/313 (36.42%), Postives = 155/313 (49.52%), Query Frame = 0


Query: 14  FFVVLNHLRVNGDSWRRSLHQPL-------DPATFSSPPSPPPPPPP--------PPPPL 73
           FF +   + V+ ++ RR LHQPL        P  F S PSPP P  P        P  P 
Sbjct: 13  FFYIFFSVSVSSEAHRRILHQPLFPESSTPPPPDFQSTPSPPLPDTPDQPFFPENPSTPQ 72

Query: 74  ESAHSDQPTPAPSNVS--LPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQ 133
           ++     P P  ++V+  LP +P++  QS KP K + IV SV IVTLGMLSALAFFLYR 
Sbjct: 73  QTLFPPPPPPVSADVNGGLP-IPTATTQSAKPGKKVAIVISVGIVTLGMLSALAFFLYRH 132

Query: 134 RIKYRYKSRMLV----EKERSLSFRHDSGIP---PSSFLNYGTMERRPGSIVERKGG-KG 193
           + K+   ++ LV    +   S  F+ DSG P    S+FL  GT+E    S  E  GG  G
Sbjct: 133 KAKHASDTQKLVTGGGDGGGSRRFQEDSGPPTTTSSTFLYMGTVEPTRVSASESNGGTNG 192

Query: 194 EDGSSPDRRVDSVKKLDFHLLSPELQPLPPLS---QNQIVNPSFETPLSD---DESRETV 253
              SSP R+++S K+ + +  SPELQPLPPL+   Q    +PS  +P S    +E R+T 
Sbjct: 193 PVNSSPYRKLNSAKRSERYRPSPELQPLPPLAKPPQPSDNSPSALSPSSSSSGEECRDTA 252

Query: 254 FHTPEWAA---------AVPYSG------GKRESRNNSLSVKPKEGTSPLPYLEDSLIKQ 279
           F+TP  +A         A P S        KR S  +     P    S  P ++  +I  
Sbjct: 253 FYTPHGSAISSDDGYYTAFPRSANGSLPHSKRTSPRSKFGSAPTTAASRSPEMKHVIIPS 312

The following BLAST results are available for this feature:

BLAST of CSPI06G28840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJX6	1.8e-23	36.42	Formin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=FH6 PE=2 SV=1	[more]
Q10Q99	1.1e-04	27.88	Formin-like protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=FH8 PE=2 SV=1	[more]

BLAST of CSPI06G28840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIH8	6.8e-151	99.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495090 PE=4 SV=1	[more]
A0A5A7SYW9	2.1e-139	94.70	Formin-like protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25...	[more]
A0A6J1L3D7	7.6e-33	41.61	Formin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111499540 PE=3 SV=1	[more]
A0A6J1G6X4	6.4e-32	41.55	Formin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111451385 PE=3 SV=1	[more]
A0A5A7TWW5	1.9e-31	39.66	Formin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G...	[more]

BLAST of CSPI06G28840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036422.1	4.3e-139	94.70	Formin-like protein 6 [Cucumis melo var. makuwa] >TYK12818.1 Formin-like protein...	[more]
KAE8647520.1	2.9e-95	100.00	hypothetical protein Csa_003054 [Cucumis sativus]	[more]
KAG6594983.1	3.5e-93	71.68	Formin-like protein 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023532921.1	1.2e-32	41.22	formin-like protein 6 [Cucurbita pepo subsp. pepo]	[more]
XP_023006879.1	1.6e-32	41.61	formin-like protein 6 [Cucurbita maxima]	[more]

BLAST of CSPI06G28840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67470.1	1.3e-24	36.42	formin homolog 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..212
None	No IPR available	PANTHER	PTHR23213:SF338	FORMIN-LIKE PROTEIN 6	coord: 5..239
None	No IPR available	PANTHER	PTHR23213	FORMIN-RELATED	coord: 5..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G28840.1	CSPI06G28840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane